Ecen027777.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- clz9
- Assembly
- GCA_944548335.1
- Location
- CALYMU010001540.1:784435-786372[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-11 2.9e-08 34.0 0.1 5 39 25 59 23 63 0.91 2 2 9.6 7.9e+03 -2.5 0.1 16 24 150 158 149 159 0.82
Sequence Information
- Coding Sequence
- ATGGGAAAGCCTAAACGAAAACAAGATAAGGTAAAGTCTAAGAAAAAGAGGACATCGTACAATGCATCTTCTATAAGAGCTGCTGTTGAAGAAGTAGTAAGTGGCGGAAGTACTATTTATAAAGCTGCTAAAAAGTATGACATACCTTGGAGCACTCTCAAAGCCTATTATAAGCGGTATCAACATGATCCTACGTCCACGTCGCAGCTAAAACGGGGCAAACCCTTTGTATTACCATCGGATATAGAGATAGAACTTCTAAACTATATAAACAAAATGCAAGAGATGGGCTTTGGTTTAACGGTGATGCAAATTCGAATTGTGGCCTACAGGTTGGCTGAAAAAGCTAACATTCAACACCCTTTCTCCAAAGAGAAACAATACGCTGGCTGGTACTGGTGGGCATCATTTAAACAGAGATATAATCTTAGTCTGCGTGTACCAGAGAGTCTATCAATGAACCGTGCTCAGTCGGCTACAAGAGAAGCCCTTCAAGAATTCTATCAAATGCTGGAAGCCTTATATGAAAACTTGGCTATAAAAGATAAACCAGAAAGAATTTGGAACCTCGATGAATCTGGGTTTATGTTCGTCATGAGATCGGGCAAGATTGTATCTATCACAGGCAAGAAATATGTCTACAAACAAACATTTGGAGAGAAAGGAACTACAACAACAGTTCTACCATGTGTTAATGTGGCAGGAGATTCCATACCACCTATGATCATATTCAAGGGTAAGAGATGGGATGACCGACTAAAAAGTTGTGATTTTTCTTGCCTCATTAAATTGAGCGAAAAAGGCTGGATCAATAATGATCTGTTTCTAGAATTCTTCAAACATTTCGTAGAGAGCATACCATTGGCAAGGCCAGTTGTCCTATTTATGGACTCGCATAAGTCACATTTGGCCCCAGAAGTTCTCCAAATTGCCAGTAATGAACAGATCCACATAGTAACTTACCCTCCACATCTGACACATCTTTTGCAACCTCTAGATGTGGGAGTATTTCGGCCCTTAAAGCAAAAGTGGCGAAATGAACTGGACCAGTTCCAAATACAAAATCCTGGGGAGAAGCCAACAAGGTATAATTTCTTGACTATGTTTGCAAAAGCATATAAAGCTTCCCTGGATTCAAGAGCTATAATACAGAATGCTTTTAGAAAAGCAGGCATTTTCCCCATAGATTACAATATGATTCCTGATAATGCCGTTGCACCATCATTGGTTTTCACACCAAATAATGAAATAGAAAACCTCGACACAACCGAAGACAGAACAGTTCAACCCTGCGATGCTCAAAAGGAAAATCTTGAACCACTGACAGTGCCTGGACCCTCAGGGTTAAGCGATATATTGAAGATTCCAACTATGAAGAAACAGACAAATAAACAAACTGGAAAGAAAACATCAGATAAGAAAAAAGGAAAAATCTATGAGCCTAAGCCAAAGTCAAGCATTCAAAAAGAAGATGTGCTCCAAACAAACCAAGTAAATGTTAATGTTTGTGGTACTTGTAAACGGGACTACAGTTCTGACGTTAAAGCCAAAAATGGAGCAGAATGGATCGAGTGCCAGTTTTGTAAAACTTGGTACCATGTTAAATGCCAAAAAGTTCTAAATTCTGCATTCTTCTTATGCAGTAACTGTGAATTATCAGAttga
- Protein Sequence
- MGKPKRKQDKVKSKKKRTSYNASSIRAAVEEVVSGGSTIYKAAKKYDIPWSTLKAYYKRYQHDPTSTSQLKRGKPFVLPSDIEIELLNYINKMQEMGFGLTVMQIRIVAYRLAEKANIQHPFSKEKQYAGWYWWASFKQRYNLSLRVPESLSMNRAQSATREALQEFYQMLEALYENLAIKDKPERIWNLDESGFMFVMRSGKIVSITGKKYVYKQTFGEKGTTTTVLPCVNVAGDSIPPMIIFKGKRWDDRLKSCDFSCLIKLSEKGWINNDLFLEFFKHFVESIPLARPVVLFMDSHKSHLAPEVLQIASNEQIHIVTYPPHLTHLLQPLDVGVFRPLKQKWRNELDQFQIQNPGEKPTRYNFLTMFAKAYKASLDSRAIIQNAFRKAGIFPIDYNMIPDNAVAPSLVFTPNNEIENLDTTEDRTVQPCDAQKENLEPLTVPGPSGLSDILKIPTMKKQTNKQTGKKTSDKKKGKIYEPKPKSSIQKEDVLQTNQVNVNVCGTCKRDYSSDVKAKNGAEWIECQFCKTWYHVKCQKVLNSAFFLCSNCELSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697252;
- 90% Identity
- iTF_00697252;
- 80% Identity
- -