Ecen010162.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000765.1:225980-228292[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-13 3.9e-10 40.1 0.0 2 41 16 56 15 60 0.91
Sequence Information
- Coding Sequence
- ATGGTACGGAACTATGTGCGGCGTACAACGCGGCAGTCGTGGGACGAAAGTGCCATGAAAAATGCTGTTGAGgctgttattaataaagaaatggGCTTCAAAAAAGCGTCCAAGAATTTTAATGTGCCTGCTAGTACCCTTAGAGACAGGGTAAAAAAAGTTAAGGATGGGTTGAAGGATATAGAAAACAGCGGATCTAAAGGGCTTGGGAACTTTAAAACTGTTTTTACAAAAGAACAAGAAAAAGAAATGGTTGATCACATTCTGCAGCTGGAAAGCCGCCTGTTTCCTATTACCGTGAAAGATTTGCGGGAGATTGCTTTTAATTTAGCagagaaaaataacattaaacatGATTTTGATAAAGAAATTGGGATGGCTGGGTACACATGGGTTGAAAAATTTCTAAAAAGGAATCCAATCATAACCCTGCGTAAACCAGAAGGAACTTCAGGAGCTCGGGCAATGGGTTTCAACAGGGTATCAGTCGGTAATTTCTTTGCTTTGCTGACTGAAACAATGGACAAACATAATTTATCCCCTGAGCAGATTTATAACGTTGATGAAACCGGAATTTCAACCGTACCAAAGAAAGTATCAAAAGTTCTGGCCAGAAAAGGAAAAGCTCAGGTTGGCTGTCTTACATCGGCTGAACGTGGTAAGACAATCACGGTTGAAATTTGTATGAGTGCATCAGGTCACTATATCCCACCTCTATTCGTTTTTCCCAGGGTCAGAGCACCCAAAAATCTCAACATTTTAGAAAGGGTTCCACCAGGTTCCGTTGCAACTTATCATCCAAGTGGCTGGATGCAAACAGATATATTTTTGACGTGGTTTGATCACTTTCTGTCCCACACAAAACCAACAAAGGAAAAACCGATATTATTACTATTAGATGGCCACTCCACGCATACAAAAAATTTAGCATTCATAAACAAGGCTCGAGAAAACCACGTCATTGTGATTTGTTTTCCGCCCCACTGCTACCACAACATCCAGCCACTGGACGTTGGCTTAATGGCACCACTAAGTCAATATTATTCTAATGAAGTAAAGAAATGGTTGCGCAAAAATTATCCAAGGATGGTGACTGAGCTTCAGGTCCCAGAACTATTTGGAATGGCATATATGCAAGCGGCTGTAATGTTGACGGCTGTCAACAGTTTCAGAGCGACAGGCATTTATCCTTTGAACGCTGACGTTTTTGAAGATTGGAGGTTTGAACCCGCAGAAACTACGAATAGGCCAGATGCTCCTGAGCTACAAGCTACAATAGAAAATGCTGCTGTCGCTGAAACTTCTAGACTTCCCCGGGTAGAAAATAATCATGAGAGTGATTCCCAGGATACAAATGCATCAGATTCGATaatgccacctttcattttggATGATTTGGCTATTTCATGTTCATCTCCTCCAAATTCAAATTATCCACTGAACGCTGACGTTTTTGAAGATTGGAGGTTTGAACCCGCAGAAACGACGAACAGGCCAGATTCTCCGAAACTGCAAGCCACAGTAAAAAAACCTCTCACTGAAATTTCTAGACTTCCCCTGGTAGAAGATGATCATGACAGTGATTCCCAGGATACCAATGCTTCAGATTCGATCGTGCCACCTTTCAATTCGGAGAATTTGGCTATTTCACAAGATGATAAAATAGCATGTGCATCTTCATCACATTCAATTCACCAGACAGAACCAATCACATCTGAGCATAATATAGCATCATCACCACCCCATAGTGAATCAGCTCCAAAATCAACACAACACCATTCACCACAACCATCAACATCAACATTTAAATTCACGTCTCCCAGAGACCTGGTTAAATTGCCCGATAGAGGAAGACCGATAACATCTCGccaaacaaaaagaaaaggaaaGACTGCCATTTTAACAGGTTCTCCGTATAAATTAGCACTGGAAGCTGCTTTTACAGAGAGAGAATTTAAAACAAAGGCCCTAGGTGTTCCGAAAGGCAAAGGAAAAGGCAAGAAAACCCCACTTACAACAAATAAATTGAAGGAAAAGAAGACGCTTGAAActacaacaaataaaatattaaagcggAAGAAAACACAAGCAGGAAAAAAATCGATTAAGAAAGCTAAACGCGATAGTGAAGATGAATATaaagatgatgaagatgatgacaaTGCATGTATATTTTGCTTAGAGACATACTCTAAATCTAAGTCAACAGATGGTTGGGTTAAATGTACAAAATGTCCTGGTTGGGCTCATGATGCCTGTGCAGGCATAGACGAAGAAGACGATTTTGAATATGTCTGTGATTTTTGCCAATAA
- Protein Sequence
- MVRNYVRRTTRQSWDESAMKNAVEAVINKEMGFKKASKNFNVPASTLRDRVKKVKDGLKDIENSGSKGLGNFKTVFTKEQEKEMVDHILQLESRLFPITVKDLREIAFNLAEKNNIKHDFDKEIGMAGYTWVEKFLKRNPIITLRKPEGTSGARAMGFNRVSVGNFFALLTETMDKHNLSPEQIYNVDETGISTVPKKVSKVLARKGKAQVGCLTSAERGKTITVEICMSASGHYIPPLFVFPRVRAPKNLNILERVPPGSVATYHPSGWMQTDIFLTWFDHFLSHTKPTKEKPILLLLDGHSTHTKNLAFINKARENHVIVICFPPHCYHNIQPLDVGLMAPLSQYYSNEVKKWLRKNYPRMVTELQVPELFGMAYMQAAVMLTAVNSFRATGIYPLNADVFEDWRFEPAETTNRPDAPELQATIENAAVAETSRLPRVENNHESDSQDTNASDSIMPPFILDDLAISCSSPPNSNYPLNADVFEDWRFEPAETTNRPDSPKLQATVKKPLTEISRLPLVEDDHDSDSQDTNASDSIVPPFNSENLAISQDDKIACASSSHSIHQTEPITSEHNIASSPPHSESAPKSTQHHSPQPSTSTFKFTSPRDLVKLPDRGRPITSRQTKRKGKTAILTGSPYKLALEAAFTEREFKTKALGVPKGKGKGKKTPLTTNKLKEKKTLETTTNKILKRKKTQAGKKSIKKAKRDSEDEYKDDEDDDNACIFCLETYSKSKSTDGWVKCTKCPGWAHDACAGIDEEDDFEYVCDFCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00705917;
- 90% Identity
- iTF_00704889; iTF_00705917; iTF_00705916;
- 80% Identity
- -