Ecen004374.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000161.1:1005628-1007790[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-13 2.9e-10 40.5 0.1 1 41 20 61 20 63 0.93 2 2 1.5 1.3e+03 0.0 0.0 19 30 247 258 245 259 0.90
Sequence Information
- Coding Sequence
- ATGCCGCCAAAAAAACGAGATCGTCGTAAACTTGGAGCAAGACCATACCAAAATTACACCAAAGAACAACTGTCACTAGCAGTTGATAAagtccaaaacaaaaaaatgtcaTCCTATGAGGCCGCAAGTACTTATGGCATTCCTAGAAGGACTATcgaaagaaaagtaaaaaaaatacatatgaaTAAACCGGGACCTCCGCAAAGACTGTCTGAACAAGAAGAGTTGGATTTTGTGAAAGTTCTGGTGGTAGTGGCAGACTTCGGTACCCCTCTGTCTCTTATGGAACTCAGGaaaaagaagaaaCCAGTTAGAGTATCAAATAATGAAGAGATCGGGTCAACAACAACAGAAGAATTAGAAATGAGTATACACAGTGACAGCGACATAATAGATATTGATTTAGCAGAAGAAAATGACAAGCAATTTGGTAATAAATCACCAGAGGTAATTGACTTGGTTGATAGTACAGAGGTAGAAAGAAATATAGATATcattgaaaaagaaatatttgatCGGATAAAAGATTTAGATCGGAGGGAAATAGAAGACGACATTTCTAACTCGAATAATGAAAACCCTCCAAGTGGCGAAGAGCAGAAGTTTgaagaagaaataataaataaaaacaatactgATTTGATGAATGGTGAATGCACGTGGGATGTAGGAGACAACATATTGGCGCGGTATTACGCATCTCGCTCTTGGAGATATTACATCGGCGTTATTTTGAATGTCAACAAagctgaaaaaaaatattctgtttCCTACTATAAGACAATAAAACAAAGTGGTAATATTACATTTGTGAAACCAAAAAGAGAAGATATAGATACCGCACTGCCCGAAAGTTGCATAGTAAAAGCgataaatttgttaaaattatcTGAAAATCCAGAGTATACTCTCTGCGATGACGAggacttaatttattttaaatga
- Protein Sequence
- MPPKKRDRRKLGARPYQNYTKEQLSLAVDKVQNKKMSSYEAASTYGIPRRTIERKVKKIHMNKPGPPQRLSEQEELDFVKVLVVVADFGTPLSLMELRKKKKPVRVSNNEEIGSTTTEELEMSIHSDSDIIDIDLAEENDKQFGNKSPEVIDLVDSTEVERNIDIIEKEIFDRIKDLDRREIEDDISNSNNENPPSGEEQKFEEEIINKNNTDLMNGECTWDVGDNILARYYASRSWRYYIGVILNVNKAEKKYSVSYYKTIKQSGNITFVKPKREDIDTALPESCIVKAINLLKLSENPEYTLCDDEDLIYFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697259;
- 90% Identity
- iTF_00697259;
- 80% Identity
- -