Ecen028178.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- clz9
- Assembly
- GCA_944548335.1
- Location
- CALYMU010001549.1:207872-209617[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-09 1.6e-06 28.5 0.0 5 35 22 53 20 54 0.91 2 2 9.5e-11 7.9e-08 32.7 0.1 7 39 54 86 53 90 0.92
Sequence Information
- Coding Sequence
- ATGATTTGCTTTATTTTGCAGGTAAAGTCTAAGAAAAAGAGGACATCGTACAATGCATCTTCTATAAGAGCTGCTGTTGAAGAAGTAGTAAGTGGCGGAAGTACTATTTATAAAGCTGCTAAAAAGTATGACATACCTTGGAGCACTCTCAAAGCAAGAGCTGCTGTTGAAGAAGTAGTAAGTGGCGGAAGTACTATTTATAAAGCTGCTAAAAAGTATGACATACCTTGGAGCACTCTCAAAGCCTATTATAAGCGGTATCAACATGATCCTACGTCCACGTCGCAGCTAAAACGGGGCAAACCCTTTGTATTACCATCGGATATAGAGATAGAACTTCTAAACTATATAAACAAAATGCAAGAGATGGGCTTTGGTTTAACGGTGATGCAAATTCGAATTGTGGCCTACAGGTTGGCTGAAAAAGCTAACATTCAACACCCTTTCTCCAAAGAGAAACAATACGCTGGCTGGTACTGGTGGGCATCATTTAAACAGAGATATAATCTTAGTCTGCGTGTACCAGAGAGTCTATCAATGAACCGTGCTCAGTCGGCTACAAGAGAAGCCCTTCAAGAATTCTATCAAATGCTGGAAGCCTTATATGAAAACTTGGCTATAAAAGATAAACCAGAAAGAATTTGGAACCTCGATGAATCTGGGTTTATGTTCGTCATGAGATCGGGCAAGATTGTATCTATCACAGGCAAGAAATATGTCTACAAACAAACATTTGGAGAGAAAGGAACTACAACAAGAGTTCTACCATGTGTTAATGTGGCAGGAGATTCCATACCACCTATGATCATATTCAAGGGTAAGAGATGGGATGACCGACTAAAAAGTTGTGATTTTTCTTGCCTCATTAAATTGAGCGAAAAAGGCTGGATCAATAATGATCTGTTTCTAGAATTCTTCAAACATTTCGTAGAGAGCATACCATTGGCAAGGCCAGTTGTCCTATTTATGGACTCGCATAAGTCACATTTGGCCCCAGAAGTTCTCCAAATTGCCAGTAATGAACAGATCCACATAGTAACTTACCCTCCACATCTGACACATCTTTTGCAACCTCTAGATGTGGGAGTATTTCGGCCCTTAAAGCAAAAGTGGCGAAATGAACTGGACCAGTTCCAAATACAAAATCCTGGGGAGAAGCCAACAAGGTATAATTTCTTGACTATGTTTGCAAAAGCATATAAAGCTTCCCTGGATTCAAGAGCTATAATACAGAATGCTTTTAGAAAAGCAGGCATTTTCCCCATAGATTACAATATGATTCCTGATAATGCCGTTGCACCATCATTGGTTTTCACACCAAATAATGAAATAGAAAACCTCGACACAACCGAAGACAGAACAGTTCAACCCTGCGATGCTCAAAAGGAAAATCTTGAACCACTGACAGTGCCTGGACCCTCAGGGTTAAGCGATATATTGAAGATTCCAACTATGAAGAAACAGACAAATAAACAAACTGGAAAGAAAACATCAGATAAGAAAAAAGGAAAAATCTATGAGCCTAAGCCAAAGTCAAGCATTCAAAAAGAAGATGTGCTCCAAACAAACCAAGTAAATGTTAATGTTTGTGGTACTTGTAAACGGGACTACAGTTTTGACGTTAAAGCCAAAAATGGAGCAGAATGGATCGAGTGCCAGTTTTGTAAAACTTGGTACCATGTTAAATGCCAAAAAGTTCTAAATTCTGCATTCTTCTTATGCAGTAACTGTGAATTATCAGAttga
- Protein Sequence
- MICFILQVKSKKKRTSYNASSIRAAVEEVVSGGSTIYKAAKKYDIPWSTLKARAAVEEVVSGGSTIYKAAKKYDIPWSTLKAYYKRYQHDPTSTSQLKRGKPFVLPSDIEIELLNYINKMQEMGFGLTVMQIRIVAYRLAEKANIQHPFSKEKQYAGWYWWASFKQRYNLSLRVPESLSMNRAQSATREALQEFYQMLEALYENLAIKDKPERIWNLDESGFMFVMRSGKIVSITGKKYVYKQTFGEKGTTTRVLPCVNVAGDSIPPMIIFKGKRWDDRLKSCDFSCLIKLSEKGWINNDLFLEFFKHFVESIPLARPVVLFMDSHKSHLAPEVLQIASNEQIHIVTYPPHLTHLLQPLDVGVFRPLKQKWRNELDQFQIQNPGEKPTRYNFLTMFAKAYKASLDSRAIIQNAFRKAGIFPIDYNMIPDNAVAPSLVFTPNNEIENLDTTEDRTVQPCDAQKENLEPLTVPGPSGLSDILKIPTMKKQTNKQTGKKTSDKKKGKIYEPKPKSSIQKEDVLQTNQVNVNVCGTCKRDYSFDVKAKNGAEWIECQFCKTWYHVKCQKVLNSAFFLCSNCELSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697252;
- 90% Identity
- iTF_00697252;
- 80% Identity
- iTF_00697252;