Ecen017977.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000997.1:226594-233258[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-12 4.2e-09 36.7 0.0 1 39 28 66 28 69 0.94 2 2 9.5e-14 7.8e-11 42.3 0.0 1 44 144 187 144 188 0.94
Sequence Information
- Coding Sequence
- ATGTGTGATGGTGTTGTTGTTGTGTGTGTTAAGAACTTTctagaaatagtACTTAAGATAAGACGTAAAAGGCAACAGTGGTCGGAAGAAAGTTTAGGACGGGCAGTGCGCGCCGTTCAATCAGAAGGAATTTCTATACGCACGGCTTCAATCCTCTTCGGAGTCCCTAGGACCGTTCTCCGGCGCTATTTAGAAACTGGCAAAGCGTGCAATAAATTAGGAAAACGACCAATCTTCACTGAAGTACAAGAGAGAGTGCTAGTTATACGCCTTCAAGAACATTTAGAGAAAGGAAAACGTCTTACCTCCAAAGTTATCTGCCAAGAAGCATTCCACTTAGCTGAAGAACTGGATCTCCGCGCTCCATTCAACAAGAAAATGAAACTTGCTGaaatagtACTCAAGATAAGACGTAAAAGGCAACAGTGGTCGGAAGAAAGTTTAGGACTGGCAGTGCGCGCCGTTCAATCAGAAGGAATTTCTATACGCACGGCTTCAATCCTCTTCGGAGTCCCTCGAACCACTCTCCGACGCTATTTAGAAACTGGCGAAACCTCCAAAAAATTAGGAAAACAACCAATCTTCACTAAAGTACAAGAGCGAGTGCTCGTTATACGCCTTCAAGAACATTTAGAGAAAGGAAAACGACTTACCTCCAAAGTTATCTGCCAAGAAGCATTCCGCTTAGCTGAAGAACTGGATCTTCGCGCTCCATTCAACAAGAAAATGAAACTTGCTGCTAATCCAGCCGACAAGTTTGTTGTAATGGGTGACTTCAATCTTGGGTCCATTCAATGGCAGTTAATGGATGGTTTGGGTTACCTTATGCCGACCAACTTGTTGGGGAAAATTGAAACAGAATTGGTCGATGAGTTGGACGTTATCGATTTTCAGCAATATAATTGTGTTCCTAATCAGCATGGTAGATTCTTAGACTTGGTTTTAGCCAACCTCGATGTCAGCGTCTCTAACTGTAATAACCCACTTGTTCCTCTCGATGCGCATCATAATGCACTTGAAGTGACTGTTAATATCTGTTTACAGCAGCTGTTAAAACCAGCTCCAAGGACCAAGTACTGTTACGATAAGGCAGATTTTAATGCATTTAAACTTAGTTTATCAGAAACAGATTGGGAACTTAATCTTACAGAAAATTCACTAGAGGAAGCTACTGAATACTTCTACACATTGCTGAAATCTTTGCGTGAAAGGTTCGTCTGTGAGCTGGTATTGTTCTTCCAAGTCCAAGTCGTGTCCAGCAAGAATCCGGAGGTACCCGGATGGGAAGGTCCATCAAATCAAGATGTGCAATTCATACCGACGGAAAAAGGAAAATATATTCTAGTAATGCGGGGTTTCACATACTCTCAAGTCGGCGGACGTTTCTTCTACTGTTCTTCCAAGCACATGGGTTGTCGTGCGAGGGTGAGGATGTTAGCCGGGAAGTTGGTTCCATCAGGTGACGCGCATAACCACGCGCCGCCGTCTCATGCGCGCTGCGGGAACGGAGCCTTCGTCCAATTGCGACCCCGCAACCTCCTTGGCTCTGGTCTTCCCCCCGCCTCTGCCGCAGCACTCGCCTTGCACGCCTTGAATTACCCGAGAATAATGCCCAAGACAGACCTCTGGTCTGGCATGTCCAAAACAGATTCGAATTCGAAAAAGGAATAG
- Protein Sequence
- MCDGVVVVCVKNFLEIVLKIRRKRQQWSEESLGRAVRAVQSEGISIRTASILFGVPRTVLRRYLETGKACNKLGKRPIFTEVQERVLVIRLQEHLEKGKRLTSKVICQEAFHLAEELDLRAPFNKKMKLAEIVLKIRRKRQQWSEESLGLAVRAVQSEGISIRTASILFGVPRTTLRRYLETGETSKKLGKQPIFTKVQERVLVIRLQEHLEKGKRLTSKVICQEAFRLAEELDLRAPFNKKMKLAANPADKFVVMGDFNLGSIQWQLMDGLGYLMPTNLLGKIETELVDELDVIDFQQYNCVPNQHGRFLDLVLANLDVSVSNCNNPLVPLDAHHNALEVTVNICLQQLLKPAPRTKYCYDKADFNAFKLSLSETDWELNLTENSLEEATEYFYTLLKSLRERFVCELVLFFQVQVVSSKNPEVPGWEGPSNQDVQFIPTEKGKYILVMRGFTYSQVGGRFFYCSSKHMGCRARVRMLAGKLVPSGDAHNHAPPSHARCGNGAFVQLRPRNLLGSGLPPASAAALALHALNYPRIMPKTDLWSGMSKTDSNSKKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -