Ecen018065.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000997.1:991302-1002159[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-09 1.2e-06 28.9 0.0 2 38 40 75 39 80 0.89 2 4 3.4e-08 2.8e-05 24.5 0.0 19 38 188 207 174 212 0.82 3 4 1.4e-08 1.2e-05 25.7 0.1 19 38 281 300 267 303 0.84 4 4 1.4e-08 1.1e-05 25.8 0.1 19 38 374 393 360 396 0.84
Sequence Information
- Coding Sequence
- ATGGCTCGCGTTGGCGCGGCGCGCGTTGAGCCCGGCTGCGGTCAGTTCGTCGCTCACTCACgATCAAGTTTCAGAGGACGTAAAAATAGACATCCAAGGAAGAAAGGGAGGACACCCGAAGATGTTATGAAAGCAGCTGTTGGACTAGTAATGAATGGAAAACCTTTGAGAAAAGCAGCAGAATTATATGGAATACCATATCCAACCCTACGCAGTTACTATAGCAAATCAAAGCTCGATGATAAAATAAGATACACACCGAATTATGAAGCGAACAGAATTTTCTCCGATGAACAAGAACTACTCATAAAAGATGACTTTAAAAATGCTATGGAGCTTGGTAACCTGACTGTCCAAGGATGTTTGAGGACGGCTTACCAAATGGGTGTTAATCTAGGTGTTAAAATCCCTCCATCTTGGAGAATCAAACAGATGGCTGGCAGAGATTGGTTCAGAGAATCAAGTTTCAGGGCACGTAAAAATAGACGTCCAAGAAAGAAAGGGAGGACACCCGAACATGTTATGAAAGCAGCTGTTGAACTTGCAATGATTGGAAAACCTTTGAGAAAAGCAGCACAAATATATGGAATACCATATCCAACCCTACGCAGTTACTATAGCAAATCAAAGCTCGATGATAAAATAAGATACACACCGAATTATGAAGCGAACAGAATTTTCTCCGATGAACAAGAACTACTCATAAAAGATGACTTTAAAAATACTATGGAGCTTGAATCAAGTTTCAGGGTACGTAAAAATAGACGTCCAAGAAAGAAAGGGAGGACACCTGAACATGTTATGAAAGCCGCTGTTGAACTAGCAATTATTGGAAAACCTTTGAGAAAAGCAGCACAAATATATGGAATACCATATCCAACCCTACGCAGATACTATAGCAAATCAAAGCTCGATGATAAAATAAGATACACACCGAATTATGAAGTGAACAGAATTTTCTCCGATGAACAAGAACAACTCATAAAAGATGACTTTAAAAATACTATGGAGCTTGAATCAAGTTTCAGGGCACGTAAAAATAGACGTCCAAGAAAGAAAGGGAGGACACCCGAACATGTTATGAAAGCAGCTGTTGAACTAGCAATGATTGGAAAACCTTTGAGAAAAGCAGCACAAATATATGGAATACCATATCCAACCCTACGCAGATACTATAGCAAATCAAAGCTCGATGATAAAATAAGATACACACCGAATTATGAAGTGAACAGAATTTTCTCCGATGAACAAGAACAACTCATAAAAGATGACTTTAAAAATACTATGGAGCTTGaTTTTGTGTCTACCGATCCGCTAACAAGGAATCACTGGCCAGGACAAACAAGTTCTATCGCACTGAACTGTCGTGAATGCTACAGAAATCGTAAAAAGAAGGAGAGCAACTTCTCATGCACTGGCTGTTCTGGAGCCCCACCACTTTGCCCAGAGTGTTTTGAATCTTGGCATACAAATTACCATCTCATACCTACCGGTAAAGGCCAGCATCTAGTTATGTGGAGGGGATACACGTACTCGAAAGCTGGGGACATCTTTTACTGTTCCTCTAAACGTAGACACTCGTGTTCTGCTCGTGTCAAACTATGCAATGATAGGATTCTGCCATTTGAGCACAGACATTCACATGAACCACCGCAATATATAGTGACAGCGCAGGAATACGAACTGATACCCACTCGTAAAGGCAACCATTTAGTCATGCATAAAGGATATACGTATTGGGAGAAATACGGAATGTATTACTGTTCGTCTAGATCTGGTAAAGGGTGCACCGCGCGGATTAAGTTGAAGGAAAATGGCGGCGTCAAAATAATTGCTGGTGAACATATTCACCTACCCCCGAGATATGTGAAGACTTCTGAAGGAATTTatataaaagtttaa
- Protein Sequence
- MARVGAARVEPGCGQFVAHSRSSFRGRKNRHPRKKGRTPEDVMKAAVGLVMNGKPLRKAAELYGIPYPTLRSYYSKSKLDDKIRYTPNYEANRIFSDEQELLIKDDFKNAMELGNLTVQGCLRTAYQMGVNLGVKIPPSWRIKQMAGRDWFRESSFRARKNRRPRKKGRTPEHVMKAAVELAMIGKPLRKAAQIYGIPYPTLRSYYSKSKLDDKIRYTPNYEANRIFSDEQELLIKDDFKNTMELESSFRVRKNRRPRKKGRTPEHVMKAAVELAIIGKPLRKAAQIYGIPYPTLRRYYSKSKLDDKIRYTPNYEVNRIFSDEQEQLIKDDFKNTMELESSFRARKNRRPRKKGRTPEHVMKAAVELAMIGKPLRKAAQIYGIPYPTLRRYYSKSKLDDKIRYTPNYEVNRIFSDEQEQLIKDDFKNTMELDFVSTDPLTRNHWPGQTSSIALNCRECYRNRKKKESNFSCTGCSGAPPLCPECFESWHTNYHLIPTGKGQHLVMWRGYTYSKAGDIFYCSSKRRHSCSARVKLCNDRILPFEHRHSHEPPQYIVTAQEYELIPTRKGNHLVMHKGYTYWEKYGMYYCSSRSGKGCTARIKLKENGGVKIIAGEHIHLPPRYVKTSEGIYIKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -