Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000004.1:785472-804239[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.018 1.1 10.1 0.4 1 23 377 399 377 399 0.98

2 10 0.0021 0.12 13.1 8.6 1 23 406 428 406 429 0.94

3 10 0.085 5 8.0 3.6 1 23 433 455 433 455 0.97

4 10 0.0037 0.22 12.3 1.5 1 23 460 483 460 483 0.97

5 10 0.0036 0.21 12.3 0.2 1 23 487 510 487 510 0.94

6 10 1 59 4.6 0.5 2 23 599 621 598 621 0.95

7 10 0.035 2 9.2 0.9 2 20 637 655 636 658 0.89

8 10 6.9e-06 0.00041 20.9 1.4 1 23 664 686 664 686 0.99

9 10 2.8e-05 0.0016 19.0 5.9 1 23 693 715 693 715 0.98

10 10 7.9e-05 0.0047 17.6 1.2 1 23 721 744 721 744 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.018	1.1	10.1	0.4	1	23	377	399	377	399	0.98
2	10	0.0021	0.12	13.1	8.6	1	23	406	428	406	429	0.94
3	10	0.085	5	8.0	3.6	1	23	433	455	433	455	0.97
4	10	0.0037	0.22	12.3	1.5	1	23	460	483	460	483	0.97
5	10	0.0036	0.21	12.3	0.2	1	23	487	510	487	510	0.94
6	10	1	59	4.6	0.5	2	23	599	621	598	621	0.95
7	10	0.035	2	9.2	0.9	2	20	637	655	636	658	0.89
8	10	6.9e-06	0.00041	20.9	1.4	1	23	664	686	664	686	0.99
9	10	2.8e-05	0.0016	19.0	5.9	1	23	693	715	693	715	0.98
10	10	7.9e-05	0.0047	17.6	1.2	1	23	721	744	721	744	0.93

Sequence Information

Coding Sequence: ATGAGGTGCGTTGTTCCTAGCTGCAAAAATGATTCCCGAACCAATTCCAAGTCAGATGGGATCACGTTCCACTCGTTTCCCGTGGAGCCTTCACTCCGTAGATCCTGGTTAGAAGCCCTAGGCAGGACAAACTGGAAGCCCAAGGAGCGCAGTTCAGTCTGTTCCTTGCATTTCAGGCTTGATGATCTTTATATATCTACAAATGGACTCCGCAAGGTCCAGGCGGGAGCGGTGCCTTCCATCCAAAAGGTCTGCAGAATGTGCCTCGTTATAAGCGAAAGACTGTTGTCGATTGAGAAGTGTAACCTGGGTGAAGCGTTTGAACGACTCACAGGATTATCAGTAATGGATGACGTCAGCCTACCGCCGAATCTCTGCCCGCAGTGCGCAACGCAACTTCACAACTACAATAAGTTCAGAGAGAAAACACTGAGAGTTCACCAGGTTATGGTAGATCTGCTGAAAAATCATGATAATCTCACAAGAAACATAATAAAATATATTCCCGAAGATCTACGAACAACTATACTCAGTAAACATTTAAATAATGATTATAATTTAATATTAGAATATACAGAAAGAGATCCTACCATAGACTCGCTAAAAGACGAAACAAAATCAGACATAGACAAAGAAATAGACATAAAAAACGAGCCGGATCAGCCCGAAATATTTGTCGACGACTTCAGCACGAAAAGCGAATCTAGAGACTATTCAGAAGTATCCGAAAACACAAACTTTACACAAGAATTCGATATATCAGAAAACGCAGAAAACAATTATACACAAGAAATTGATCATACAGAAAACACACAAGAATATGATATATCAGAAAGCGAAAAAGAAGCACTACCAGCTTTCGACAGCGAAGACAGCCTCCCTCTAGAAGTAACTAGAAAGAAGAAGAAGAAACGAGAGCCAGCGAAAAAGAAAGAAAAACTTAAGAAGGCAGAAAGAGCGAGAGTTAAGAAAACAGAACCGTCTGAGCCTAAGATAGACCGGAGAAGGAAGCCGTTCCTAAACCAAGACTTAAACGAGACTCTGTTTACAATAATCAATTTAACAGTCGAAGAACAATTGGCTGAAGTTTTAAAGAGACAAGACACGGATAACTTTAAGCATGCAGTGTTCAAGTGTTTGGAATGCTTTAAAGGGTTTTTGGATCAAGACGCTTATGCCACGCATATGGTCAGACACACCAGTGCATGCGGTGAACATAGATGTGAGATCTGCAAAACGCATTTCAAGCAATCACACGCGCTCAGGAAGCATATCACTGCGCATCATTTACAAAGGTTCAGCTGTAACCACTGTCCGTACGTCACCACGCACCGACAGACGGCCAGATTGCACGAGCGCTGGCACAAAGGGACCAAGTACCAGTGTCCGCATTGCGATCTAGAGTTTGTAAAGTTCACGACCTACATGGGCCACGTCCGCATAAAGCACCCTTCAGACTTCGTCTGCGAGCTGTGCGGGTACTCGTTCGTAAGCGCTAAGGGTATCGAACTGCACAAGAAGTTGAAGCATAGGGGGGAGGACGCTACTATCCCAGAGGACGCGCCGTACTGCGAGCCGTGCAACGTGCGCTTCGTGTCCACAGAAGCACACCACAAGCACGTGAGCGTGTCCGCGCGACACTCCGGGCCCGACCGGGAACACAACAAGCCCACGCGTGGACGGAAATGCAGGGAACAATTGGAGAGAGAAAAACTACTAAACAAAGACGATGAACATGACGAGGAAAAGAGACGGATGTATCCGAGTCAGCTGCGGAAGGTCGAGGGGCCCATATCTTGTGAGCAGTGTGGAATGGAGCTAGAAGACTCGCGCGCCTACCACGGCCACTTCCGGCGGATGCACCCGGACAAGAATCGAACCAACTACCCGTCTATGAAGTCGCCTTGCATGTGCGAGGTCTGCGGTCGGATATTCCAGAGCTTTGCCCTCCTGAAAGACCACACGTGGACCCACACCGGCGAGCGTCCCTTCAAATGCGAACAATGCGGCAAGTCCTTCAGGATGAAGCAACGACTGGTCGCGCACCGACGCGTCCACAGCGCCGCGCGGACCTCCTATAGTTGCAGTGTCTGCGGGAAACACTTCTCTACGCACAGCAACCGACAGAGGCACATGTTTATCCACACAGGGCTCAAACCCTACAAATGTGAGATGTGCGGCAAAGGCTTCAAGCACGCGAGTGAGAAGCGGGCCCACGTCACTTATGTCCATCTTAAGAAGCCCTGGCCCAAACGCGCACGGAGCAAGCGGCACGAGGGATCGCCGCCGCAAGCGGGTGCGAGTGAGATGGATATACAGCCGGTGTGGCCAGCTTGCGACCCCAAATTATCCGATATTAACATGATGGACGATAAGCCATTGTACTATAGATAA
Protein Sequence: MRCVVPSCKNDSRTNSKSDGITFHSFPVEPSLRRSWLEALGRTNWKPKERSSVCSLHFRLDDLYISTNGLRKVQAGAVPSIQKVCRMCLVISERLLSIEKCNLGEAFERLTGLSVMDDVSLPPNLCPQCATQLHNYNKFREKTLRVHQVMVDLLKNHDNLTRNIIKYIPEDLRTTILSKHLNNDYNLILEYTERDPTIDSLKDETKSDIDKEIDIKNEPDQPEIFVDDFSTKSESRDYSEVSENTNFTQEFDISENAENNYTQEIDHTENTQEYDISESEKEALPAFDSEDSLPLEVTRKKKKKREPAKKKEKLKKAERARVKKTEPSEPKIDRRRKPFLNQDLNETLFTIINLTVEEQLAEVLKRQDTDNFKHAVFKCLECFKGFLDQDAYATHMVRHTSACGEHRCEICKTHFKQSHALRKHITAHHLQRFSCNHCPYVTTHRQTARLHERWHKGTKYQCPHCDLEFVKFTTYMGHVRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRGEDATIPEDAPYCEPCNVRFVSTEAHHKHVSVSARHSGPDREHNKPTRGRKCREQLEREKLLNKDDEHDEEKRRMYPSQLRKVEGPISCEQCGMELEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRIFQSFALLKDHTWTHTGERPFKCEQCGKSFRMKQRLVAHRRVHSAARTSYSCSVCGKHFSTHSNRQRHMFIHTGLKPYKCEMCGKGFKHASEKRAHVTYVHLKKPWPKRARSKRHEGSPPQAGASEMDIQPVWPACDPKLSDINMMDDKPLYYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706430;
90% Identity: iTF_00703398;
80% Identity: iTF_00696529;