Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000068.1:781276-830790[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0092 0.54 11.1 3.5 1 23 570 592 570 592 0.99

2 21 0.23 14 6.7 1.4 1 19 599 617 599 618 0.94

3 21 0.3 17 6.3 3.5 1 23 626 648 626 648 0.94

4 21 0.0021 0.12 13.1 0.5 1 23 653 675 653 675 0.96

5 21 0.042 2.5 9.0 1.8 1 23 679 702 679 702 0.90

6 21 0.44 26 5.8 0.1 2 23 714 736 713 736 0.96

7 21 5.6 3.3e+02 2.3 0.2 6 20 745 759 743 764 0.91

8 21 0.00069 0.041 14.6 0.3 3 23 836 856 835 856 0.98

9 21 0.00036 0.021 15.5 2.7 1 23 862 884 862 884 0.99

10 21 6.5e-06 0.00038 21.0 1.3 2 23 890 911 889 911 0.97

11 21 0.0014 0.081 13.6 0.0 1 21 917 937 917 938 0.96

12 21 1.1 64 4.5 6.4 1 20 1399 1418 1399 1422 0.89

13 21 0.2 12 6.8 4.3 1 23 1780 1802 1780 1802 0.95

14 21 0.0016 0.094 13.5 0.1 1 23 1807 1829 1807 1829 0.98

15 21 0.37 22 6.0 1.4 1 23 1833 1856 1833 1856 0.89

16 21 0.3 17 6.3 0.2 2 23 1868 1890 1867 1890 0.96

17 21 5.6 3.3e+02 2.3 0.2 6 20 1899 1913 1897 1918 0.91

18 21 9.7e-05 0.0057 17.3 0.8 3 23 1990 2010 1989 2010 0.99

19 21 7e-05 0.0041 17.7 1.7 1 23 2016 2038 2016 2038 0.99

20 21 0.0029 0.17 12.7 6.4 2 23 2044 2065 2043 2065 0.97

21 21 0.00031 0.018 15.7 0.1 1 23 2071 2094 2071 2094 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0092	0.54	11.1	3.5	1	23	570	592	570	592	0.99
2	21	0.23	14	6.7	1.4	1	19	599	617	599	618	0.94
3	21	0.3	17	6.3	3.5	1	23	626	648	626	648	0.94
4	21	0.0021	0.12	13.1	0.5	1	23	653	675	653	675	0.96
5	21	0.042	2.5	9.0	1.8	1	23	679	702	679	702	0.90
6	21	0.44	26	5.8	0.1	2	23	714	736	713	736	0.96
7	21	5.6	3.3e+02	2.3	0.2	6	20	745	759	743	764	0.91
8	21	0.00069	0.041	14.6	0.3	3	23	836	856	835	856	0.98
9	21	0.00036	0.021	15.5	2.7	1	23	862	884	862	884	0.99
10	21	6.5e-06	0.00038	21.0	1.3	2	23	890	911	889	911	0.97
11	21	0.0014	0.081	13.6	0.0	1	21	917	937	917	938	0.96
12	21	1.1	64	4.5	6.4	1	20	1399	1418	1399	1422	0.89
13	21	0.2	12	6.8	4.3	1	23	1780	1802	1780	1802	0.95
14	21	0.0016	0.094	13.5	0.1	1	23	1807	1829	1807	1829	0.98
15	21	0.37	22	6.0	1.4	1	23	1833	1856	1833	1856	0.89
16	21	0.3	17	6.3	0.2	2	23	1868	1890	1867	1890	0.96
17	21	5.6	3.3e+02	2.3	0.2	6	20	1899	1913	1897	1918	0.91
18	21	9.7e-05	0.0057	17.3	0.8	3	23	1990	2010	1989	2010	0.99
19	21	7e-05	0.0041	17.7	1.7	1	23	2016	2038	2016	2038	0.99
20	21	0.0029	0.17	12.7	6.4	2	23	2044	2065	2043	2065	0.97
21	21	0.00031	0.018	15.7	0.1	1	23	2071	2094	2071	2094	0.96

Sequence Information

Coding Sequence: ATGTCCTCCGTGTGTCGAATTTGCCTTACCGGCAATAAAAAGCTGGTATTTATGAAAAACAAGCTCCTTCAGAATTTGTACACAAAACTGACTGATACGAAGTTTAACTCGGAGGATACAAGACCAAGAGCTTTATGCACTGTGTGCTACCAGAAGCTGCAGCGATTCTACACCTTCCTCCAGATGGCAAACAGATCTGAAAACATCTTCAGTCAGCTATTCCAAAGGGGCCTTGAGGCTACTCATGAAGACATTAAAAAGCTCAACCTTGAAATGGGACAACAATTGTCTGTCACTAGCACGCAGTTGCCCATGGAGGATACTAACACCACTGAAAGATCTCTTGTCACCATTAAAGTTGAACCAATACCGGAGAAAGAAGAGGAGACAACAGAAGAAGATCCCCTGGTGGAGTTTGAGTCGATTATTAACAATCCCAGATACAAGTACTGCACAATTTGCGCCCATCTGCTGAAAAAGTTCTATAACTTCAAACAGCGATGCTTAAAAGCCTGCAAGATTTTAAAGTCCCTTGAAGGGACACCTAAGAGTTTACCAACCAATCTTCATAAAAAGATACCATCATCAATAGGTTTCTGCAGCACCGTAGCTCGACACAATTTGTTGGAACATAAATATGAGGCTGACACTGATCTACCCGAGACCACACCTGATATTAAGAGTGCACATAAAATCAGACCAAACATGAGCAAACAGCAACTAGAAACTGTTGACCCCATACTGCTAGACAAAGTAAAGGATGAGCCTATGCATGACATATTAGACAGCGATAGTGAAACAATAGATGTAGAAAACAGTAAAAACCTTTACCTTATTAGTACAAGTGAAAGTTACATGACTATAGATCATGGCTATACCAATGTTGAGGTAGAGCCTCAAACCATTAAGTTGGAGATTAATAAGGAACTGAATAGCGATACAAACAAAGATGATTCAAAGATACAAGAAACAAGAAAAGATAAGACTAAGCCATCCAAAATTAATGATTACCTAAAAAGCTTCGAGGATGAAATTAGGGAGTTTGAGGATGATATTGGTGTAGATGCGGCAGAGGCAGATGTAAAAGATACTACGTTTATGTTAAATAATGATCCTTTAAGGGATGATGAAGGTTTGAACTCTATGGACGATATAGCGAGTGATATGAGTGACCTTGATGACAAAAGCCTCCCTGATCATGAATACCTATCTAGCGATGAACGAGACACTGATTCAGACTCGGACATAGAAAGTCTAACTGAATTCATAGAGAAAGCTAAAGAGAAGAATATAAAAGTCAGTGAAATATATGATTTAGAGCTAGCTGAGCTACTTCTTAAGTTAAACAGAAAAAATAAAATAATTAGAAAAAGAGTTCAGTTTTTAAAAGAAAATGAGAAAATTAAGGAAGGCTTCTTAAAGATGTTTGAAAATGATGAGTATGACTTGGGTGAGGTTAAGATGAACAAAGAGGCGTTCCTCAAGATGTATGAAAGATGTGAGAGGAGATCATCCAGTTTCTTTAATGCTTATGAATTTTCAGATTTGTCGGATAAAAAGAAAACAGATGAATTCCTGCGCAACATGTTTAATATGTACAACCCGGAGTATGAAACAGTGTACGACATTGAATACCTCGACACAGAGGAGCAGAAACTACAGGAGTTTAACCGGCGCAAAGAAAAAGCAGAGTACCAGAACGCTCCATACAAATGTACGCGCTGCTACAAAGGATTCCAAAGCGAGAGACTGCTATCTTACCACATGAAGAAACATGACGAGTCGGTAGGCCCGCACGAGTGCCACATCTGCTCGACTCGCTTCCATTCGAAGCCTGTACTTCGCGCGCACGCCTGGTACTGCCACTCGGCGGTGTACACATGCCGGGAGTGCAAAGTCTCATTCTACTACTTCTCGAGCATGCAGAATCACTTCTATCTGCACAAAGGAAAGGAGTACCTGTGCACCATCTGTAACGGCATCTTTCGTACTGCCACTACCTTGGCGAATCACAAGCGGAGCCACGTGACGTCGCATATATGTACAACGTGCGCTCGCTCGTTCGTCTCGGCTCATGGATTACAAGTCCACAGGGCGTTCAAACACAAGGGCGCGCCGGAGCCGGGCGCGGACGCCGTGCGCTGCGAGGAGTGTCCGCTCATACTGGACTCGCAGAAGGTGTACGAGAGGCATCTGAAGATCTCTCACCGTGCATATCCGTACTTCTGCAGCTGTTTCCAAAGCTTCTCGTCGCTGGCGGAGCTGCGGGAGCACAAGGTGGAGGCGGGACACCAGCACAGCACAAAAAGAAAAGAACCTTTGCATAAGAGAGCGTGTCCCTCGAACGGGAGCAAGAGACCCATCGGAGACAAGAAAGCGACGCGGACCTGTCCCATTTGCCAAGAGGAGGTTCCGAACACGCACCCCACGTCTCTGTACAACCACCACGAGAAGCATCACGCGAGCGTGCCCTACCTCATCACGAATCAAGTCAGGAACTTGCTGTGCGACGAGTGCGGGAAGCAGTTCGTATCACAGGCAACTTACCAGGATCATAAGAACATCCACGCCGGCATTCGGCCATACAAATGTCCGAAGTGTCCCCGCACCTGCGCGACCAAGCCCTGCCTCGTCGATCACTTAATGACACATGGCCCGCCGCGTCTACAGTGCAAGCACTGCGGGAAACTCTTCAAAAAACCTTCCAGTCTCGCAGGTCATATGCGAATTCACAAAAACGACCGGCGCTACGTCTGCGACATCTGCTCCGCGAGTTTCATCCACTCCGGCGCGCTGACGGAGCACATCAAAGGGATTATTAACAATCCCAGATACAAGTACTGCACAATTTGCGCCCATCTGCTGAAAAAGTTCTATAACTTCAAACAGCGATGCTTAAAAGCCTGCAAGATTTTAAAGTCCCTTAAAGGGACACATAAGAGTTTACCAACCAATCTTCATAAAAAGATACCATCATCAATAGGATTCTGTAGCACCGTAGCTCGATACAAGTTGTTGGAACATAAATATGAGACTGACACTGATCTACCCGAGACCACACCTGATATTAAGAGTGAACCTAACATCACACCGAACACAGAAGTAAGAAGCAATCAGACACTAGAAACTGTTGACCCCATACTAACAGACCCTATTCAAGTAAAAGATGAGCCTATGCATGACGTATTAGACTGCGATAGTGAAACAACAGACGCAGCAAACAGTAAAACCCTTTACGTTATTACTACAAGTGATGGTTACATGACTATAGATACCAATGTTGAGGAAGAGCCTCAAACTATTAAGTTGGAGATTAATGAGGATCTGAATACTGATACAAACAAAGATGATTCAAAGATACAAGAAACAAGAAAAGATAAGCCTAAGCCATCTAAAATTAATGATTACCTAAAAAGCTTCGAGGATGAAATTAGGGAGTTTGAGGATGATATTGGTGTAGATGCGGCAGAGGCAGATGTAAAAGATACTACGTTTATGTTAAATAATGATCCTTTAAGGGATGATGAAAGTTTGAACTCAATGGATGATATAGCGAGTGATATAAGTGACCTCGATGATAAAAGCCTCCCTGATGATGAAAGCCTACCCGACAATGAACAAAACACCGATTCAGACTCGGACGTAGAAAATCTAACTGAATTCTTAGAAAAAGCTAAACAGAAGAAAATAAAAGTCAGTGAAATATATGATTTAGAACTAGCTGAGCTACTTCTTAAGTTAGACAGAAAAAATAAAATAATTAAAAAAAGAGTTCAGTTTTTAAAAGAAAAAGATAAAATTAAGGAAGGCATCTTAAAGATGTTTGAAAATGATGAGTATGACTTGGGTGAGGGGGCTAAGATGAACAAAGAGGCGTTCCTCAAGATGTATGAAAGATTTGAGAGGAGCTCCTCCAATCCCTTTAATGCTTATGAATTTTCAGATTTGTCGGATAAAAAGAAAACAGATGAATTCCTGCGCAACATGTTTAATATGTACAACCCGGAGTATGAAACAGTGTACGACATTGAATACCTCGACACAGAGGAGCAGAAACTACAGGAGTTCAACCGGCGCAAAGACAAAGCAGAGTACCAGAATGCTCCGTACAAATGTACGCGCTGCTACAAAGGATTCCAAGTGGAGAGATTGCATGCTTACCACATGAAGAAACATGACGAGTCGGCAGGCCCGCACGAGTGCCACATCTGCTCGATTCGCTTCCGCTCGAAGGCTCAAAATCGCTCGCACGCCGGACACTGCCACTCGGCGGTGTACACGTGCCGGGAGTGCAAAGTCTCATTCTACTACTTCTACCCGCCCTGGCTCCGCACGAGTGCCACTTCCGCACGATTCGCTTCCGCTCGAAGGCTACATCTGCTCGATTCGCTTCCGCTCGAAAGCTCCATCGCTCGCACGCCGGGCACTGCCACTCGGCGGTGTACACGTGCCGGCAGTGCCACGTCGCATTCTACTACTTGTGAGTATCTGTCTCTAGCTACCCGCCCTGGCTCCGCACGAGTGCCACTTCCGCACGATTCGCTTCCGCTCGAAGGCTACATCTGCTCGATTCGCTTCCGCTCGAAGGCTCTCCATCGCTCGCACGCCGGGCATTGCCACTCGGCGGTGTACACGTGCCGGGAGTGCAAAGTCTCATTCTACTACTTCTACCCGCCCTGGCTCCGCACGAGTGCCACATCCGCACGATTCGCTTCCGCTCGAAGGCTACATCTGCTCGATTCGCTTCCGCTCGAAAGCTCCATCGCTCGCACGCCGGGCACTGCCACTCGGCGGTGTACACGTGCCGGCAGTGCCACGTCGCATTCTACTACTTGTGAGTATCTGTCTCTAGCTACCCGCCCTGGCTCCGCACGAGTGCCACTTCCGCACGATTCGCTTCCGCTCGAAGGCTACATCTGCTCGATTCGCTTCCGCTCGAAAGCTCCATCGCTCGCACGCCGGGCACTGCCACTCGGCGGTGTACACGTGCCGGCAGTGCCACGTCGCATTCTACTACTTCTACCCGCCCTGGCTCCGCACGAGTGCCACATCCGCACGATTCGCTTCCGCTCGAAGGCTACATCTGCTCGATTCGCTTCCGCTCGAAGGCTCTCCATCGCTCGCACGCCGGGCACTGCCACTCGGCGGTGTACACGTGCCGGGAGTGCAAAGTCTCATTCTACTACTTGTGAGTATCTGTCTCTAGCTACCCGCCCTGGCTCCGCACGAGTGCCACATCCGCACGATTCGCTTCCGCTCGAAGGCTACATCTGCTCGATTCGCTTCCGCTCGAAGGCTCTCCATCGCTCGCACGCCGGGCACTGCCACTCGGCGGTGTACACGTGCCGGGAGTGCAAAGTCTCATTCTACTACCTCTCGAGCATGCAGAATCACTTCCATCTGCACAAAGGAAAAGAGTACCCGTGCCCCATCTGTAACGGCATCTATCGTACCGCCACGGGCTTGGCGAATCACAAGCGGAGCCACGTGACGTCGCATATATGTACCACGTGCGCGCGGTCGTTCGTCTCGACTCAGGGATTACTAAACCACAGGGCGTTCAAACACAAGGGCGCGCCGGAGCCGGGCGCGGACGCCGTGCGCTGCAAGGAGTGTCCGCTCATACTGGACTCGCAGAAGGTGTACGAGAGGCATCTGAAGATCTCTCACCGTGCATATCCGTACTTCTGCAGCTGTTTCCAAAGCTTCTCGTCGCTGGCGGAGCTGCGGGAGCACAAGGTGGAGGCGGGACACCAGCACGTCACAAGAAGCAGAGAAGCTTGGCAAAAGAGAGCGTGTCCCGCGAACGGGAGGAAGAGACCCACCGGAGACAAGGAAGCTACGCGGACCTGCCCCATTTGCCAAGAGGAGGTTCCGAACACGCACCCCACGTCTCTGTACAACCACCACGAGAAGCATCACGCGAGCGTGCCCTACGTCGTCACGAGCCAAGTCAGGAACTTGCTGTGCGACGAGTGCGGGAAGCAGTTCGTATCACAGTCAACTTACCAGGATCATAAGAACACCCACGCCGGCATTCGGCCATACAAATGTCCGAAGTGTCCCCGCACCTGCGCGACCAAGCCCCACCTCGTCGATCACTTAATGATACATGGCCCGCCGCGCCTACAGTGCAAGCACTGCGAGAAACGCTTCAAAAAACCCTCCAGTCTCTACTGTCATATGCGAATTCACAAAAACGACCGGCGCTACGTCTGCGACATCTGCTCCGCGAGTTTCATCCACGCCGGCTCGCTGACGGAGCACATCAAAGGGGTGCACCAACACCAACGGAGAAAGCGGAAAAATAAATAA
Protein Sequence: MSSVCRICLTGNKKLVFMKNKLLQNLYTKLTDTKFNSEDTRPRALCTVCYQKLQRFYTFLQMANRSENIFSQLFQRGLEATHEDIKKLNLEMGQQLSVTSTQLPMEDTNTTERSLVTIKVEPIPEKEEETTEEDPLVEFESIINNPRYKYCTICAHLLKKFYNFKQRCLKACKILKSLEGTPKSLPTNLHKKIPSSIGFCSTVARHNLLEHKYEADTDLPETTPDIKSAHKIRPNMSKQQLETVDPILLDKVKDEPMHDILDSDSETIDVENSKNLYLISTSESYMTIDHGYTNVEVEPQTIKLEINKELNSDTNKDDSKIQETRKDKTKPSKINDYLKSFEDEIREFEDDIGVDAAEADVKDTTFMLNNDPLRDDEGLNSMDDIASDMSDLDDKSLPDHEYLSSDERDTDSDSDIESLTEFIEKAKEKNIKVSEIYDLELAELLLKLNRKNKIIRKRVQFLKENEKIKEGFLKMFENDEYDLGEVKMNKEAFLKMYERCERRSSSFFNAYEFSDLSDKKKTDEFLRNMFNMYNPEYETVYDIEYLDTEEQKLQEFNRRKEKAEYQNAPYKCTRCYKGFQSERLLSYHMKKHDESVGPHECHICSTRFHSKPVLRAHAWYCHSAVYTCRECKVSFYYFSSMQNHFYLHKGKEYLCTICNGIFRTATTLANHKRSHVTSHICTTCARSFVSAHGLQVHRAFKHKGAPEPGADAVRCEECPLILDSQKVYERHLKISHRAYPYFCSCFQSFSSLAELREHKVEAGHQHSTKRKEPLHKRACPSNGSKRPIGDKKATRTCPICQEEVPNTHPTSLYNHHEKHHASVPYLITNQVRNLLCDECGKQFVSQATYQDHKNIHAGIRPYKCPKCPRTCATKPCLVDHLMTHGPPRLQCKHCGKLFKKPSSLAGHMRIHKNDRRYVCDICSASFIHSGALTEHIKGIINNPRYKYCTICAHLLKKFYNFKQRCLKACKILKSLKGTHKSLPTNLHKKIPSSIGFCSTVARYKLLEHKYETDTDLPETTPDIKSEPNITPNTEVRSNQTLETVDPILTDPIQVKDEPMHDVLDCDSETTDAANSKTLYVITTSDGYMTIDTNVEEEPQTIKLEINEDLNTDTNKDDSKIQETRKDKPKPSKINDYLKSFEDEIREFEDDIGVDAAEADVKDTTFMLNNDPLRDDESLNSMDDIASDISDLDDKSLPDDESLPDNEQNTDSDSDVENLTEFLEKAKQKKIKVSEIYDLELAELLLKLDRKNKIIKKRVQFLKEKDKIKEGILKMFENDEYDLGEGAKMNKEAFLKMYERFERSSSNPFNAYEFSDLSDKKKTDEFLRNMFNMYNPEYETVYDIEYLDTEEQKLQEFNRRKDKAEYQNAPYKCTRCYKGFQVERLHAYHMKKHDESAGPHECHICSIRFRSKAQNRSHAGHCHSAVYTCRECKVSFYYFYPPWLRTSATSARFASARRLHLLDSLPLESSIARTPGTATRRCTRAGSATSHSTTCEYLSLATRPGSARVPLPHDSLPLEGYICSIRFRSKALHRSHAGHCHSAVYTCRECKVSFYYFYPPWLRTSATSARFASARRLHLLDSLPLESSIARTPGTATRRCTRAGSATSHSTTCEYLSLATRPGSARVPLPHDSLPLEGYICSIRFRSKAPSLARRALPLGGVHVPAVPRRILLLLPALAPHECHIRTIRFRSKATSARFASARRLSIARTPGTATRRCTRAGSAKSHSTTCEYLSLATRPGSARVPHPHDSLPLEGYICSIRFRSKALHRSHAGHCHSAVYTCRECKVSFYYLSSMQNHFHLHKGKEYPCPICNGIYRTATGLANHKRSHVTSHICTTCARSFVSTQGLLNHRAFKHKGAPEPGADAVRCKECPLILDSQKVYERHLKISHRAYPYFCSCFQSFSSLAELREHKVEAGHQHVTRSREAWQKRACPANGRKRPTGDKEATRTCPICQEEVPNTHPTSLYNHHEKHHASVPYVVTSQVRNLLCDECGKQFVSQSTYQDHKNTHAGIRPYKCPKCPRTCATKPHLVDHLMIHGPPRLQCKHCEKRFKKPSSLYCHMRIHKNDRRYVCDICSASFIHAGSLTEHIKGVHQHQRRKRKNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -