Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000071.1:2400199-2404604[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.63 37 5.3 1.6 1 23 49 72 49 72 0.97

2 27 0.038 2.2 9.1 0.2 3 23 97 118 95 118 0.96

3 27 0.00038 0.022 15.4 1.3 2 23 141 162 140 162 0.96

4 27 0.079 4.7 8.1 1.7 1 23 166 188 166 188 0.85

5 27 0.00082 0.049 14.4 1.3 1 23 192 215 192 215 0.97

6 27 0.019 1.1 10.1 1.3 1 23 221 244 221 244 0.96

7 27 0.024 1.4 9.7 0.2 1 13 251 263 251 266 0.86

8 27 0.042 2.5 9.0 3.0 1 23 315 337 315 337 0.92

9 27 0.0044 0.26 12.1 2.5 1 23 406 428 406 428 0.97

10 27 0.26 15 6.5 0.3 1 10 432 441 432 454 0.76

11 27 0.018 1.1 10.1 2.1 2 23 459 481 458 481 0.96

12 27 0.04 2.4 9.0 4.2 1 23 525 547 525 547 0.96

13 27 0.47 28 5.7 0.0 2 23 576 598 575 598 0.94

14 27 0.015 0.88 10.4 0.6 2 23 619 641 618 641 0.93

15 27 0.0014 0.083 13.6 3.2 3 23 648 669 647 669 0.97

16 27 0.0079 0.47 11.3 1.0 1 23 674 697 674 697 0.94

17 27 0.21 13 6.8 0.1 2 23 700 722 699 722 0.95

18 27 0.027 1.6 9.6 0.7 2 22 729 749 728 749 0.93

19 27 0.00087 0.051 14.3 0.7 1 23 806 829 806 829 0.95

20 27 0.35 21 6.1 0.2 3 23 858 879 856 879 0.92

21 27 0.059 3.5 8.5 0.2 3 23 903 925 901 925 0.95

22 27 0.00071 0.042 14.5 0.4 3 20 932 949 930 953 0.90

23 27 0.23 14 6.6 0.3 1 23 958 981 958 981 0.96

24 27 0.00082 0.048 14.4 0.3 2 23 987 1009 987 1009 0.94

25 27 0.00028 0.017 15.8 5.0 1 23 1013 1036 1013 1036 0.97

26 27 0.00045 0.026 15.2 0.6 2 23 1043 1064 1042 1064 0.96

27 27 0.025 1.5 9.7 2.1 1 23 1070 1092 1070 1092 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.63	37	5.3	1.6	1	23	49	72	49	72	0.97
2	27	0.038	2.2	9.1	0.2	3	23	97	118	95	118	0.96
3	27	0.00038	0.022	15.4	1.3	2	23	141	162	140	162	0.96
4	27	0.079	4.7	8.1	1.7	1	23	166	188	166	188	0.85
5	27	0.00082	0.049	14.4	1.3	1	23	192	215	192	215	0.97
6	27	0.019	1.1	10.1	1.3	1	23	221	244	221	244	0.96
7	27	0.024	1.4	9.7	0.2	1	13	251	263	251	266	0.86
8	27	0.042	2.5	9.0	3.0	1	23	315	337	315	337	0.92
9	27	0.0044	0.26	12.1	2.5	1	23	406	428	406	428	0.97
10	27	0.26	15	6.5	0.3	1	10	432	441	432	454	0.76
11	27	0.018	1.1	10.1	2.1	2	23	459	481	458	481	0.96
12	27	0.04	2.4	9.0	4.2	1	23	525	547	525	547	0.96
13	27	0.47	28	5.7	0.0	2	23	576	598	575	598	0.94
14	27	0.015	0.88	10.4	0.6	2	23	619	641	618	641	0.93
15	27	0.0014	0.083	13.6	3.2	3	23	648	669	647	669	0.97
16	27	0.0079	0.47	11.3	1.0	1	23	674	697	674	697	0.94
17	27	0.21	13	6.8	0.1	2	23	700	722	699	722	0.95
18	27	0.027	1.6	9.6	0.7	2	22	729	749	728	749	0.93
19	27	0.00087	0.051	14.3	0.7	1	23	806	829	806	829	0.95
20	27	0.35	21	6.1	0.2	3	23	858	879	856	879	0.92
21	27	0.059	3.5	8.5	0.2	3	23	903	925	901	925	0.95
22	27	0.00071	0.042	14.5	0.4	3	20	932	949	930	953	0.90
23	27	0.23	14	6.6	0.3	1	23	958	981	958	981	0.96
24	27	0.00082	0.048	14.4	0.3	2	23	987	1009	987	1009	0.94
25	27	0.00028	0.017	15.8	5.0	1	23	1013	1036	1013	1036	0.97
26	27	0.00045	0.026	15.2	0.6	2	23	1043	1064	1042	1064	0.96
27	27	0.025	1.5	9.7	2.1	1	23	1070	1092	1070	1092	0.97

Sequence Information

Coding Sequence: ATGCGTTTTTCCTTTTTAGGTGGAAACACCCCCGCGGTCCCCAGCCAGGCATCGAAAATACAGCGTAACAGACTTCTAAAGTCCAACACTGTCACTATACTAGAACACTCCACCGTTATCCCCTTTAAATTCCAAGGAAAATCGTACTATTGCTTCTACTGCAACTCGCAAATCAGCACGTTCTTAAGCCTTAAAAAACACGTAGAGACCGAACACCAAAAAACCCCAAAGAAATCTGTTTTCATCAACAAAGGAGCTATCGTCAAAATCGATGTAGCTTCAATAGCCTGCAAACTTTGCAATACAAAGCTCGAGAACCTAGACGATCTTGTATCACACCTAAAAATAAAACACAATAAACAGTTCTACGACGAACTAGGCTACGGCGTTATGCCGTACAAACACTACCCTACCAACTGCCAATGCGCGATATGCGGCGAAACCTTCGACTACTACATAAAACTTAACCAACACATGAACCAACATTTCGGTAAACACGTCTGCGAAATCTGCGGAAAAAGCTTCCTGAATACAATCCGTCTGAAGACTCATTCCTTCTCTCACGGGGCTAGTTACCCTTGCAGCTATTGTTCAGAAGTTTTTCGCACGTATTCTAAAAGAAAGAATCACTATGCAACAGCGCATAATGTTTCGAAAGACCATAAATGTCTCTACTGCTCTGAAACCTTTCCTAACTACGGTGCCAGGACCCTGCATTTGCGATACGCTCATAATGTTGATACTCCGATATTCGACTGTCCTGTTTGTGGGAAATCATTCCGTTTGAACAGTGGCAATACTGGCTATCCCGTGCCCGAGCTGCCAGAAAAAGTCCGTAAGGCGAAACTGACTTCCACCAAACTCAATCGTATGAGAAATCATAACACGATAATCATCCTACAAAACAGTACGGCAATTCCTTTCAAATGGCATCGCCAGTTTTACCTCTGTTTCTACTGCCATAAACCTTTTTCCACCTTCAACGAAGTAAAAGAACACACAAGCGACCATAAAACTGTAAACATCAAATCCGCAGTGACGTTTCTGTGCGCGAATGATAAAGTCAAAATCGATATCACCTCCTTCAAATGCAAATTATGCGATCAAGATCTATTAAATATACACTCTTGCATAGACCATTTAAAACTAACACATGGGAAAGTCTTCGAAGAAGCTGACACGGGTGTTATACCATACAAACACGAGCTAGATTCTTTCGACTGCGGTATATGCAACGAAAAATTCCACTACTTCGTCAAATTGAACCAACACATGAACTCCCATTTTGGGAACCACGTTTGCGAGACTTGTGGCAAATCCTTCCTCAGCGCTGCAAGGCGTAGGCTACACTCTCTTATCCACGCTAGCGATGTCCAATGCGAGCATTGCCCTGAGAAATTCAGGTCTTTATCTATGAAGAACTATCATGTGAATAAAACACACCAATCTAGCGTGAAATATGTTAAACCGCGAAAATACAAGGGTACGGAATCTTCGTCGATGCGCCGAAGGAAAAATCTCCAAATTATATTCAACAATACATCAATAATACCGTTTAAATGGCGAGGGAAATATCTCTGCTTCTATTGCAGCAAACATCTAACAGAATACGATGATCTACGAAAGCATACAAAATCTCACGGAGATTGCTCCATCCTAGATCATTCGCTAAAAGTTTTGAAAGGCGGCACAAACATGGAAATCAAAATTGACGTGTCAGATATTAGTTGTGAATATTGCGGCGTAAATGTACCTTCCATTGATAATATTATAGATCATTTGAAAAATATGCACGATATTGATTACGATAGCGAGGTAGATATGGCTACAGAGGCGTACAAGCTTGCTGACCTCAGCTGTTTGGCTTGCGACCAGAAATTTACTTACTTCGGTTACTTAGTGTCGCATATGAATAAACAACACCCCAAAAACTGCATCCTCTGTGATAAATGCAACCAAAAATTCAATAAAAAACGAGATCTCTTCTCGCATATGAAAAACTATCATAGAGAAGGGGGGTACCAATGCGACGTGTGTCCCCAAACGTTCAATTCTTTAAATATTTTGAGAAAACATAGAACGAACAGGCATTTGACTAGATGCAATATATGTCAGTTGAGGCTGCCTTCAGCGGCGTTGAAGCAAAAACATATGGACGTCGAGCACCCAGACGACGGGTCTTTGCAATGCGAAAATTGCGCTAAAGAATTTCACACGAAAACGGGACTTAGAATGCACGCGAGAAAATGCAAAATAGATTTCGAATTCGCCATCAAAAAGGAAGATTTCACAATGGATCTCGATCAGAACTATGATAATCCGCCTAAAGGACCGAGCGTCAAGCAAATCCGCGAAAACATCGTTATAGTTATAAATATGTCCACTGCGATCCCTTTCAACTTCTACAAGAACAAATTCAACTGTTTCTATTGCTCCAAAGACTTCTCCGATTCAGATTCTATGAGAGAACACACGATAGTCGAACATCCTGTATGTAATATCACAGAGAAATGTATCAAGAAATGCAGAGAGACAGTCACTTGCGTTAAAATTGACGTATCCACTCTAGCTTGCAAACTCTGCTTCGAAACATTATCCGATTTAGACAAACTACTCGATCATTTGATCCTAAAACACAACGCCAACTACGACAAAACCATAACGACTTGCCTACAACCATACAGGCTTGTAAAAGACCATATGGCTTGCCCGAACTGCCCGACAGAAGTCTTCCGTTTCTTCGGAACTCTTTTAAAACACATGAACAAAGAGCATACGAATAATAATATCATTTGCGTGTATTGCGGCGAGACTTTTCGAAGGGATCAAAACCTACGCGTCCATATTTGGAGGCATCACCGCGACGGTAGATTCAAATGCGCAATCTGCGATACCGACTGTGGTATACCCTCTCGACTCTATATGCATATGGCAAAAGCACACGGTGTTAAAGCCGCGAAATGTCCTAAATGCCCCGAAAGTTTCGAGACCCAATACCTCCGCCAAAAACACCTTATCGAAGCTCACGATTCCGGACACAAATGCACGTTCTGCGGGAAGCTCTTTACTAGGAACTCTTTTATGCGAGATCACATACGACGCACGCATTTGAAGGAGAAAAACGTAGAGTGTAATATATGCAGTATGAAGTTTTTCAATAATATATTGCTGAGGAGGCATATGGTTAAACATAGTGGGGAGAAGAACTTCCATTGTGATGTTTGTGGGGAGAGATTTTTTTGGAGGAAGAGTCTTAGGACGCATTTGGCAAGGCATAATAAACAAGCCCAGGCGCTAATGTAG
Protein Sequence: MRFSFLGGNTPAVPSQASKIQRNRLLKSNTVTILEHSTVIPFKFQGKSYYCFYCNSQISTFLSLKKHVETEHQKTPKKSVFINKGAIVKIDVASIACKLCNTKLENLDDLVSHLKIKHNKQFYDELGYGVMPYKHYPTNCQCAICGETFDYYIKLNQHMNQHFGKHVCEICGKSFLNTIRLKTHSFSHGASYPCSYCSEVFRTYSKRKNHYATAHNVSKDHKCLYCSETFPNYGARTLHLRYAHNVDTPIFDCPVCGKSFRLNSGNTGYPVPELPEKVRKAKLTSTKLNRMRNHNTIIILQNSTAIPFKWHRQFYLCFYCHKPFSTFNEVKEHTSDHKTVNIKSAVTFLCANDKVKIDITSFKCKLCDQDLLNIHSCIDHLKLTHGKVFEEADTGVIPYKHELDSFDCGICNEKFHYFVKLNQHMNSHFGNHVCETCGKSFLSAARRRLHSLIHASDVQCEHCPEKFRSLSMKNYHVNKTHQSSVKYVKPRKYKGTESSSMRRRKNLQIIFNNTSIIPFKWRGKYLCFYCSKHLTEYDDLRKHTKSHGDCSILDHSLKVLKGGTNMEIKIDVSDISCEYCGVNVPSIDNIIDHLKNMHDIDYDSEVDMATEAYKLADLSCLACDQKFTYFGYLVSHMNKQHPKNCILCDKCNQKFNKKRDLFSHMKNYHREGGYQCDVCPQTFNSLNILRKHRTNRHLTRCNICQLRLPSAALKQKHMDVEHPDDGSLQCENCAKEFHTKTGLRMHARKCKIDFEFAIKKEDFTMDLDQNYDNPPKGPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFSDSDSMREHTIVEHPVCNITEKCIKKCRETVTCVKIDVSTLACKLCFETLSDLDKLLDHLILKHNANYDKTITTCLQPYRLVKDHMACPNCPTEVFRFFGTLLKHMNKEHTNNNIICVYCGETFRRDQNLRVHIWRHHRDGRFKCAICDTDCGIPSRLYMHMAKAHGVKAAKCPKCPESFETQYLRQKHLIEAHDSGHKCTFCGKLFTRNSFMRDHIRRTHLKEKNVECNICSMKFFNNILLRRHMVKHSGEKNFHCDVCGERFFWRKSLRTHLARHNKQAQALM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -