Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000124.1:588806-598988[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0042 0.25 12.1 3.0 1 23 233 255 233 255 0.98

2 12 0.0046 0.27 12.0 1.1 1 23 270 292 270 292 0.96

3 12 1.2e-05 0.00073 20.1 0.5 2 23 298 319 297 319 0.97

4 12 3.1e-05 0.0018 18.9 0.1 1 23 325 347 325 347 0.97

5 12 1.7e-06 0.0001 22.8 1.9 1 23 356 378 356 378 0.96

6 12 2.3e-06 0.00014 22.4 0.2 1 23 384 406 384 406 0.98

7 12 0.0024 0.14 12.9 8.7 1 23 412 434 412 434 0.96

8 12 1.2e-09 6.8e-08 32.8 0.4 1 23 440 462 440 462 0.99

9 12 9.7e-06 0.00057 20.4 0.6 1 23 468 490 468 490 0.99

10 12 4.9e-05 0.0029 18.2 0.9 1 23 496 517 496 517 0.98

11 12 0.023 1.4 9.8 1.9 1 23 523 545 523 545 0.92

12 12 0.0036 0.21 12.3 0.4 1 21 551 571 551 572 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0042	0.25	12.1	3.0	1	23	233	255	233	255	0.98
2	12	0.0046	0.27	12.0	1.1	1	23	270	292	270	292	0.96
3	12	1.2e-05	0.00073	20.1	0.5	2	23	298	319	297	319	0.97
4	12	3.1e-05	0.0018	18.9	0.1	1	23	325	347	325	347	0.97
5	12	1.7e-06	0.0001	22.8	1.9	1	23	356	378	356	378	0.96
6	12	2.3e-06	0.00014	22.4	0.2	1	23	384	406	384	406	0.98
7	12	0.0024	0.14	12.9	8.7	1	23	412	434	412	434	0.96
8	12	1.2e-09	6.8e-08	32.8	0.4	1	23	440	462	440	462	0.99
9	12	9.7e-06	0.00057	20.4	0.6	1	23	468	490	468	490	0.99
10	12	4.9e-05	0.0029	18.2	0.9	1	23	496	517	496	517	0.98
11	12	0.023	1.4	9.8	1.9	1	23	523	545	523	545	0.92
12	12	0.0036	0.21	12.3	0.4	1	21	551	571	551	572	0.95

Sequence Information

Coding Sequence: ATGGAAACTGAAGATCAACAAAGCCAAGAAGATGATAACATTCATTTGGAATTAGAGATTCCGCTAGAATTGCTGCAGTATTTGAATTCTAAAGGTTGCGATCTGCAGAATATATGCCGGCTTTGTCTTGCCGCCGGTAATGAAGCCCCACTGTTACAACCTACCAGTCAGTTCTGTGTTACCGAGGAGGTTTTCCAAGCTATGACATCAGTACAGATAAGTTCAAATGATGATCTACCAAGCAGAATATGTTCAAATTGCCAAATGGAACTGGATCACTACTTTAAATTCAGAAGTAAATGTGAAAAATCTGATTATCTACTTCGGTCTCTTTTTAAAGAAGGACTCACCATTAAAAGTGAACCTAAATATGAAGCAGTCGGCACTACTAAAGAGGACCATATGAAAATTATAGAAATTTCACTCAAAACTGATGAAACAAATAAGCATTACAAATCCAAGGACTATGAAGATAACTTGAAAAGTGAACAAGGCTTAGCGGAGAAGGTATACAATTGTTATTCGGACTCCAATACCTACCATGATGACCTGAAGAGTATATTGAGTGAGGATGAAGCATTATGCATTGTCCAGGACACATTGAAGAATGAAAAGAAATTCACTATCTATGAAAGAGGTTCAGAGGCTCTCACAGAAATGATTTTTCCAAAAAATAAAAAGTCAGCAACAACACCATTTAAATGTATGTTTTGCCCTCAGGAATTTCGCCATTTAAAACGACTGGAAGCTCATCAAAATCAACACCTCAAAGAACATTCCAGAAGAACTGCCAAATACAACAACCCATATCCTTGCAACGAGTGCAAGGAAACATTCCATTCCGAGTTTGATTTGAGCCTCCACAGTATTATGCACAACACGGGTCCATGGAAATGCAGTATTTGCAATAAAGATTTTAATGAGAAACCAGCGCTACGTCGCCACATCCAGCGTCACATGGACAGTAAGCGTTACGCGTGCGACGCGTGCGGAAAAACGTTCGTAGAGCTGTACGCGCTGAAGCGACACGCGCGCGTACACACCGGCGAACGAACCGAGAAGAAACATGCTTGCACTGACTGTGATAAAAGGTTCAGTGACAGCAACCAACTAATGGTCCACATGACCCGCCACAACGGAAAGAAGCCATTTCAATGCGTCATCTGCGGCAAATCGTTTCCGTCAGCGCGTCTCCTGCGGTCACACCGGCTCGTGCACTCAGACCTCAAGAAACACGCCTGCGAATACTGCGATAAGCGTTTCCGTCACGAGTCGACACGGAACACGCACCACCGAACGCATACGGGCGAGAAGCCCTACGTGTGCTCTATTTGCGGGAAGAGTTTTATACAGGCCTCGAATCTACGCTTGCATATGCGGACCCATACAGGGGAAAAGCCGTATCCTTGTTCGCAATGCGACAACAGATTTTCATCCGGATCGACTCTCAAAGCTCATCTGCGCACGCACACCGGGGAAAAGCCTTACAAGTGCAACGTTTGTGGGAAGAGTTTCGCCCGAGTCAACATGAAGCTACACATGCGGCTACATTCCGGAGAAAGACCCTTCGCCTGTAGCGCCTGTCCTAAGAAATACGTGAGCGCGGCGCATCTCCGCTCGCACTGCCGCGCGCATACCGGTGAGAAACCTTTCGAGTGTGCCAAATGCCAGTCGAAGTTCGCCACGAAAACTCTACTCATAAAACATTTGCAGCAAAAGAAAAAGTTAAGCTCAATCAAGCAAGAAGAGCAGGACAAATCTTCAGATATTTCAAGTGTGAATGAATTATTAACGATGCCAGACCAACAAATTGATAATGACATACCAAATGCTATTGTAGAGTTAACACTAGGCACGCACGAAACTTTAGACGTTAGCCAGGAATTGGTGTTTCAAGAGAACAATGTAAAGACTCATGTTATAGTGCTTGGAAGCAGCAATACGGTCAGTTTTTTGAGCAACGACGAAAATGGAGGAAGTGGCTTGAATATCGTCACTGTCAATGAAATTGGAGTCAGCATGTCTTCAACTAACTCGAACTCTGACTGA
Protein Sequence: METEDQQSQEDDNIHLELEIPLELLQYLNSKGCDLQNICRLCLAAGNEAPLLQPTSQFCVTEEVFQAMTSVQISSNDDLPSRICSNCQMELDHYFKFRSKCEKSDYLLRSLFKEGLTIKSEPKYEAVGTTKEDHMKIIEISLKTDETNKHYKSKDYEDNLKSEQGLAEKVYNCYSDSNTYHDDLKSILSEDEALCIVQDTLKNEKKFTIYERGSEALTEMIFPKNKKSATTPFKCMFCPQEFRHLKRLEAHQNQHLKEHSRRTAKYNNPYPCNECKETFHSEFDLSLHSIMHNTGPWKCSICNKDFNEKPALRRHIQRHMDSKRYACDACGKTFVELYALKRHARVHTGERTEKKHACTDCDKRFSDSNQLMVHMTRHNGKKPFQCVICGKSFPSARLLRSHRLVHSDLKKHACEYCDKRFRHESTRNTHHRTHTGEKPYVCSICGKSFIQASNLRLHMRTHTGEKPYPCSQCDNRFSSGSTLKAHLRTHTGEKPYKCNVCGKSFARVNMKLHMRLHSGERPFACSACPKKYVSAAHLRSHCRAHTGEKPFECAKCQSKFATKTLLIKHLQQKKKLSSIKQEEQDKSSDISSVNELLTMPDQQIDNDIPNAIVELTLGTHETLDVSQELVFQENNVKTHVIVLGSSNTVSFLSNDENGGSGLNIVTVNEIGVSMSSTNSNSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00697591;
90% Identity: iTF_00704262;
80% Identity: -