Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000123.1:502751-515543[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.0056 0.33 11.7 1.5 3 23 173 193 171 193 0.96

2 32 1.6e-05 0.00096 19.7 1.7 1 23 200 223 200 223 0.97

3 32 0.0048 0.28 11.9 3.1 1 23 230 252 230 252 0.98

4 32 7.7e-05 0.0046 17.6 0.4 1 23 262 284 262 284 0.97

5 32 0.00017 0.0099 16.5 2.7 2 23 290 311 289 311 0.97

6 32 0.00015 0.0087 16.7 0.3 2 23 316 339 315 339 0.92

7 32 0.00029 0.017 15.8 1.7 1 23 345 367 345 367 0.98

8 32 6.6e-07 3.9e-05 24.1 2.3 1 23 373 395 373 395 0.98

9 32 0.00085 0.05 14.3 0.8 1 23 400 422 400 422 0.97

10 32 0.0002 0.012 16.3 0.1 1 23 428 450 428 450 0.96

11 32 1.3e-05 0.00079 20.0 1.1 1 23 455 477 455 477 0.98

12 32 2.5e-05 0.0015 19.1 0.6 1 23 483 507 483 507 0.96

13 32 0.0012 0.072 13.8 2.9 1 23 642 664 642 664 0.98

14 32 0.0014 0.084 13.6 5.9 1 23 669 691 669 691 0.97

15 32 4.8e-06 0.00028 21.4 0.4 1 23 707 729 707 729 0.98

16 32 0.00079 0.047 14.4 1.5 1 23 741 763 741 763 0.98

17 32 0.00047 0.028 15.1 2.2 1 23 768 790 768 790 0.99

18 32 1.4e-05 0.00082 19.9 0.2 2 23 795 818 794 818 0.92

19 32 4.6e-06 0.00027 21.4 1.0 1 23 824 846 824 846 0.98

20 32 0.00034 0.02 15.5 3.3 1 23 852 874 852 874 0.95

21 32 1e-05 0.00061 20.3 2.0 1 23 880 902 880 902 0.98

22 32 0.00021 0.012 16.2 1.5 1 23 908 932 908 932 0.93

23 32 2e-06 0.00012 22.6 0.7 1 23 938 960 938 960 0.98

24 32 0.0001 0.0061 17.2 8.5 1 23 966 988 966 988 0.98

25 32 0.00024 0.014 16.1 0.8 1 23 994 1016 994 1016 0.97

26 32 0.014 0.83 10.5 3.3 1 23 1022 1044 1022 1044 0.96

27 32 0.00046 0.027 15.1 0.5 1 23 1048 1070 1048 1070 0.98

28 32 0.00033 0.02 15.6 3.5 3 23 1078 1100 1076 1100 0.91

29 32 4.8e-05 0.0028 18.2 1.1 1 23 1106 1128 1106 1128 0.97

30 32 7.6e-08 4.5e-06 27.1 0.6 1 23 1134 1156 1134 1156 0.98

31 32 0.0083 0.49 11.2 0.1 3 23 1164 1184 1162 1184 0.96

32 32 2.1e-06 0.00012 22.5 6.8 1 23 1191 1213 1191 1213 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.0056	0.33	11.7	1.5	3	23	173	193	171	193	0.96
2	32	1.6e-05	0.00096	19.7	1.7	1	23	200	223	200	223	0.97
3	32	0.0048	0.28	11.9	3.1	1	23	230	252	230	252	0.98
4	32	7.7e-05	0.0046	17.6	0.4	1	23	262	284	262	284	0.97
5	32	0.00017	0.0099	16.5	2.7	2	23	290	311	289	311	0.97
6	32	0.00015	0.0087	16.7	0.3	2	23	316	339	315	339	0.92
7	32	0.00029	0.017	15.8	1.7	1	23	345	367	345	367	0.98
8	32	6.6e-07	3.9e-05	24.1	2.3	1	23	373	395	373	395	0.98
9	32	0.00085	0.05	14.3	0.8	1	23	400	422	400	422	0.97
10	32	0.0002	0.012	16.3	0.1	1	23	428	450	428	450	0.96
11	32	1.3e-05	0.00079	20.0	1.1	1	23	455	477	455	477	0.98
12	32	2.5e-05	0.0015	19.1	0.6	1	23	483	507	483	507	0.96
13	32	0.0012	0.072	13.8	2.9	1	23	642	664	642	664	0.98
14	32	0.0014	0.084	13.6	5.9	1	23	669	691	669	691	0.97
15	32	4.8e-06	0.00028	21.4	0.4	1	23	707	729	707	729	0.98
16	32	0.00079	0.047	14.4	1.5	1	23	741	763	741	763	0.98
17	32	0.00047	0.028	15.1	2.2	1	23	768	790	768	790	0.99
18	32	1.4e-05	0.00082	19.9	0.2	2	23	795	818	794	818	0.92
19	32	4.6e-06	0.00027	21.4	1.0	1	23	824	846	824	846	0.98
20	32	0.00034	0.02	15.5	3.3	1	23	852	874	852	874	0.95
21	32	1e-05	0.00061	20.3	2.0	1	23	880	902	880	902	0.98
22	32	0.00021	0.012	16.2	1.5	1	23	908	932	908	932	0.93
23	32	2e-06	0.00012	22.6	0.7	1	23	938	960	938	960	0.98
24	32	0.0001	0.0061	17.2	8.5	1	23	966	988	966	988	0.98
25	32	0.00024	0.014	16.1	0.8	1	23	994	1016	994	1016	0.97
26	32	0.014	0.83	10.5	3.3	1	23	1022	1044	1022	1044	0.96
27	32	0.00046	0.027	15.1	0.5	1	23	1048	1070	1048	1070	0.98
28	32	0.00033	0.02	15.6	3.5	3	23	1078	1100	1076	1100	0.91
29	32	4.8e-05	0.0028	18.2	1.1	1	23	1106	1128	1106	1128	0.97
30	32	7.6e-08	4.5e-06	27.1	0.6	1	23	1134	1156	1134	1156	0.98
31	32	0.0083	0.49	11.2	0.1	3	23	1164	1184	1162	1184	0.96
32	32	2.1e-06	0.00012	22.5	6.8	1	23	1191	1213	1191	1213	0.98

Sequence Information

Coding Sequence: ATGGGTTCAGTGTGCGTCGTGTGCCTGGCCTGTGATCGGAAATTAGGGCGCATTAACCACATCATTATGCGCAGTATTCTGGAACATCTGACTCATAATAAGTATCACAACATTGAGGAGAGCTACTATGAGATATGCTCCATGTGCTGCGCGGAGTTTCTGAACTGTGTCAAGTTCATACAAAAAGCACGGAACTCCTACGACACCCTCAGCGATATACATACTAAAGGATTAGTAGTGACTAAAGAAACACTAGACCATATGAACGTACAACCTATTCAAAAATTATCAATTAACACTGCTGAGTCTATGGTCACAATACACATTGTCGAATCAACTGATACTTTACAAGAGATTGTAAAGCAAGAGCCACTTGCATTCAAAGAAGAAATACTTGAAGATTCTGATCTAGACTATGCATTTGATGATAATGATAATGAACCTCTTAAGAAACTTCATAAACAAGAAGATACTGAACCAGTTACAGAGCAAAATGACGCTGAAGAACCATTATTTTGCTATAAATGCAATATATCTTTCGATCTCAAATTTAATTACGAAAAACACTTAAAAATACACGCAGAAGAAGAAAAGATATACGCTTGTAATGACTGCCCTAAAAAGTTTAAACTAAAACGCAGTCTAGTTAAGCACATGCTGAAATTCCATAGAGAAAAGACAAAGCTATACCCTTGCACTAAATGTACCGAGAAATTTCATCTCAAAAACGCCTTGAAAAAGCACTTACTCTCTCATAAAGTTACCAACAATCCTACGGAAGAGTTCGCATGTGAAATTTGCAATAGAGTCGTTAACAACCTTTATAATCTAAAGAAACACAAAGCGACGCACACAGAAGATTCCTTGACCTGTCAAACTTGTGGTAAAAACTACCTCAACAAAAATACTCTGAAGAAACACATGCGAACGCATAATCTACAGCATGCTTGCGACCAACCAGGCTGTGGTAAGATCTTCGCGCAGAAAAATCAACTGACTATCCACTCTAGGGTACACAGCGGAGAGAGACCTTTTTCCTGCGACAAATGTAATAGATCCTACACGCTCTTGGACTCCTTGAAGTACCACCAAAGAGGTCACGAAGGAAACAGGCCGTATAAGTGCAACCTATGCGAGAAAGCCTTCTACAGGAAGTTCAATCTAACAAATCATATGAGAGCGCACGACAGAGAGACGTACAACTGCTTGCTTTGCAGTAAAACGTTCATGCTACCCGTGCATTTAGAAACTCATATGCTTATCCATACCACATTAAAACCTCATGCGTGCGGACTCTGTGATCTAACCTTCGCGGCACCAAGCAGTTTGAAGGCTCATATGGTAACACATACGGATTATATGTTCACTTGTGACCGATGCGCGAAGAGCTTCCGCGACAAAGGCAGCCTTCAAAGCCATATAAAACTCCACGATGGAATCAAACCCCACGTCTGCCCAGAACCCAACTGTGGGAAAGCTTTCGTCCGGAAATTCCAGCTGAAAGAACATTCTAGAGTACATACAGGCGAAAGACCAAACATGTCAACTACAGTGTGCTGTGTCTGTCTGACCGGAAACCGTAAAATGAAATTCATTGAAGATATTGATCTCCAAAATATGTTTGAAAAACTTACAAATCTAAAGGCAACAGAAGAAACTCTCAATATGATGAACATAGAAATAACTTCAAACTTATCTATCAGCAACAATGAGTCCATGTTCACTATATCAATCAATGAAGCTGACAATGAATTAATAGTTAAAGAGGAACCAATGTCTTTAAAACAGGAAGAAATACCAGATGATATATTTGAAATGGCCTTTGCTGACGATATTGAGTCAGATGAACCATTAAAAGTGCCCAAGAACTTAAAAGTAGAAAATGCTTCAGCAAGCAAGAAAAAGATAAGCAATTTCCCAGATTACTATTGCAATAAGTGCAATATACCGTTCCTAAGCAAATATTACTTTACCAAACACATGAAAATACACATTGAAGCAAGTTATTGTTGTGATAAGTGCCCTAAGAAGTTTAAATTCAAGAAAAGATTAGTTAAACACATGTTAAACCATAGCAATGAGAAAGAAATCAACGGAATCAAAAATACATCCTCTGGATACACATGTGAAGTCTGTAACAAAACTGTAAGCAATCTGTACAACCTTCAACTTCACATGTCCGTACATACTAAGAAGAGACCTGAGCCGGCCACGACAGAATTTACCTGTGACATTTGTAATAGAGGCTTGAACAATCTACATAACTTACTGAAACATAAAGCGACTCATACAGACGAGAAATACACATGCGACACTTGTTCTAGAAGCTACTTGAATAGAGATTCCTGGAGGAAACATATGAGGACTCATTCGGCACAGCATGCATGTGACATCCCAGGTTGCGATAAAGTTTTTCCGCAGAAAAATCAATTGACAGTTCACTTAAGAGTACATACCGGTGAGAGACCATTCTCCTGTGAAGAATGCGGGAAATCCTACACAAAAATGGAGTCGCTTAAAGTCCATCAGAAAATGCACTCGAACGAAAAACCACACAAGTGTATTACTTGCAATAAGTCGTTTAATTCTAAAGTTAATCTACTGAACCATATTAAATCACATCCTGATAGCAACAGTTTCGAGTGCGAGCATTGTAACAAGGCATTTTCGCTAGCTATACATTTAGAGAAGCATATGGTGACACATACGTCTATCAGAAGACATATATGCGAAGAGCCGGGATGTGGAAAAGAATTTGCGAGACGCTTCCATTTAAAAGAACATAGCAGAATCCATACAGGAGAAAGACCGTTCTCATGCTCAGAGTGTGGTAAGACCTTTATGAAGTCAGAGTCTTTAAGAGCTCATCTCAAAATTCACAGCGGAGAAAAACCCCATAAGTGTACTTCGTGCTCCAAAGCGTTTCATCGAAAGAGGAATCTACAAAAACATATGAAAACTCATGACGAAAAGGAGTCTTTTGATTGTGAGCATTGTGCCAAAACTTATACCCTACCCATCCAATTAGAAACTCATATGTTAACCCACACGAACCTCAAACCACACGCTTGCACCCACTGCGTCCTAACCTTTGCAGCTCTAAGCAGTTTGCACGCACACTTAAAAACTCACGAGTACAAATACACCTGTGACAGATGCGCAAAAAGTTTCGGCGAAAAAGGAACACTTCAGAGTCATATAAAACTCCACGATGGAATAAAACCTCATTTGTGCGAGCACCCCGGCTGCGGCAAGGCTTTTGCCAGACGCTACCATTTGAAAGAACACTCACGTGTTCACACGAAGGAGAAACCTTTTATATGCAACGAATGTGGGAAGACATACACGCAGAGCAGTGCTCTATTCTTCCATCAGAGACTGCATAGCGGAGAAAGGCCGTTTGTGTGTGAGATCTGTGGTAGAACCTTCACGGATAAGTACGGTCTGCAGAAACATACAAGGGTGCACACGGGTGAAAAACCTTATGGTTGTGACAGTTGTGATCTTAGATTCGCATATGCGAGTGCCCTGAGAGACCACAGGGCCATTCATGTGAACGGGGAAAAGCCATACGCATGTGATAGGTGTTTTAAGACCTTTTGTCGTAAGAGTAACTTGAAGAAGCATATGAAAACGCATTTAAGAGATAAACAGTTTTTTAAGAACCCGTGA
Protein Sequence: MGSVCVVCLACDRKLGRINHIIMRSILEHLTHNKYHNIEESYYEICSMCCAEFLNCVKFIQKARNSYDTLSDIHTKGLVVTKETLDHMNVQPIQKLSINTAESMVTIHIVESTDTLQEIVKQEPLAFKEEILEDSDLDYAFDDNDNEPLKKLHKQEDTEPVTEQNDAEEPLFCYKCNISFDLKFNYEKHLKIHAEEEKIYACNDCPKKFKLKRSLVKHMLKFHREKTKLYPCTKCTEKFHLKNALKKHLLSHKVTNNPTEEFACEICNRVVNNLYNLKKHKATHTEDSLTCQTCGKNYLNKNTLKKHMRTHNLQHACDQPGCGKIFAQKNQLTIHSRVHSGERPFSCDKCNRSYTLLDSLKYHQRGHEGNRPYKCNLCEKAFYRKFNLTNHMRAHDRETYNCLLCSKTFMLPVHLETHMLIHTTLKPHACGLCDLTFAAPSSLKAHMVTHTDYMFTCDRCAKSFRDKGSLQSHIKLHDGIKPHVCPEPNCGKAFVRKFQLKEHSRVHTGERPNMSTTVCCVCLTGNRKMKFIEDIDLQNMFEKLTNLKATEETLNMMNIEITSNLSISNNESMFTISINEADNELIVKEEPMSLKQEEIPDDIFEMAFADDIESDEPLKVPKNLKVENASASKKKISNFPDYYCNKCNIPFLSKYYFTKHMKIHIEASYCCDKCPKKFKFKKRLVKHMLNHSNEKEINGIKNTSSGYTCEVCNKTVSNLYNLQLHMSVHTKKRPEPATTEFTCDICNRGLNNLHNLLKHKATHTDEKYTCDTCSRSYLNRDSWRKHMRTHSAQHACDIPGCDKVFPQKNQLTVHLRVHTGERPFSCEECGKSYTKMESLKVHQKMHSNEKPHKCITCNKSFNSKVNLLNHIKSHPDSNSFECEHCNKAFSLAIHLEKHMVTHTSIRRHICEEPGCGKEFARRFHLKEHSRIHTGERPFSCSECGKTFMKSESLRAHLKIHSGEKPHKCTSCSKAFHRKRNLQKHMKTHDEKESFDCEHCAKTYTLPIQLETHMLTHTNLKPHACTHCVLTFAALSSLHAHLKTHEYKYTCDRCAKSFGEKGTLQSHIKLHDGIKPHLCEHPGCGKAFARRYHLKEHSRVHTKEKPFICNECGKTYTQSSALFFHQRLHSGERPFVCEICGRTFTDKYGLQKHTRVHTGEKPYGCDSCDLRFAYASALRDHRAIHVNGEKPYACDRCFKTFCRKSNLKKHMKTHLRDKQFFKNP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698495;
90% Identity: iTF_00698495;
80% Identity: -