Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: Best2
Assembly: GCA_943735975.1
Location: CALSER010000132.1:212545-236650[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-08 1.1e-05 25.3 0.0 2 41 504 542 503 544 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-08	1.1e-05	25.3	0.0	2	41	504	542	503	544	0.90

Sequence Information

Coding Sequence: ATGACTGTGACTTACACTGGAGAGGTAGCGACATGCCGTGGATTTGGGACTTTCCTGAAAGTCCTCTACAGATGGAAGGGCAGTATATACAAATTGGTCTGGCTGGATCTACTTATGTTCCTGCTGGTGTATTATATTCTCAATTTAACGTACCGCCTGATATTAGATGAAGAACGGAAAAGGATATTCGAAGGCGTAGTAAATTACTGTAGTTTCCACGGTAATGTGATACCCGTATCGTTCGTGCTCGGTTTCTACGTGACTGTAGTGATGAACCGATGGTGGAACCAATACACGACGATTCCCTGGCCTGATTCCATTGCCGTGTTCGTCTCTGCTACTATACATGGACAGGATGAACGTGGGCGACTAATGCGCCGAACTATCGTTCGTTATGTATGCCTCTGCCTCACGATGGTGCTAACTATGATCTCGCCGCGAGTGAAGAAACGATTTCCAACGCTTAATAACTTGGTAGAAGCTGGCCTTCTAATGGATAACGAGAAATCTATCCTTGATAACTTGAATGTGAAGTTCCCCAAACCTACGAAGCATTGGTTGCCTATAGTGTGGGCCACCAGCATTGTAACCAGAGCTCGCAAAGAAGGTCGGATAAGAGATGATTTCGCTGTGAAAACAATAATTGACGAGCTGAACAAATTCAGAGGGCAAGCTGGGCTGTTGCTCAGTTACGATACGATAAGCGTACCGTTGGTTTACACACAGGTAGTGACAATAGCAGTATACTCATATTTCATGACATCGGCTCTAGGCAGCCAGTGGGTTGACCACAAACTCCAGTCATCTAGTACAGAAGCCTCCATCAGTAATATAGATCTATACTTTCCTATATTCGCGACACTAGAGTTTTTCTTCTACATGGGTTGGCTGAAGGTGGCCGAGTCATTGATCAATCCGTTTGGAGAGGATGATGACGACTTTGAAGTTAATTGGCTGATTGACCGGAATTTGCAGGTCTCATACATGATAGTAGACGAAATGCACCACGAGCATCCCGAGCTAATCAGAGACCAATACTGGGACGAGGTGTTCCCATCCGAACTACCTTACACAATCGCCACAGAGAACAACAGAGAAGAGCATCCAGAACATTCCACTGCCAGGATTGCAGTACCAGTGAGACAGAGAAGCATGGTCTTCACCACGCCCTCGCAGATCCAGATCGACAAGATGGTACCTTCGAACACCGTGAGTTACAAGTTCGACCCCCCAGAGCAACTCCAAATGAACGACGACGCGATCTCAGGGATCCATTTCAACGTATCCCGAGGCAGCAGACGAGGGAAGAAAGAAGATCGTAACTCTATGGGTTCTAACAACTCAATGGCGTCACTGGCCCAGCAAACGCCTATGCCGAGAACGAATTCTGTCACTTCCATGTTGAAAAGACTATTCTCGAAGGAGGAGCAAAAAGGGAATGCGCAGATTGACGGTAGTACGATGTCGGGAACTCGAAGTAGGAGCAAAGAAGTGAAAGTAAAATGGAGCCAAGAAGATTTAAATAGAGCATTTAAACTTGTGGAAAAGGGAACTACAATAAGAGAGGCAGCTCGCTCTAATGGCATCCCGTTTTCAACTCTCCAAGAGAGACTAAAAAAGAAGAACTCAGAGTTTCCAGAAATGGGAAGAAAACCAGTCTTCACAAAAGAACAAGAAGCGGAAATGGCAGACCAGGTAGCGACTATCCCAAAAGCTGAAGCAGGATTTGCTTCCACAGGAATATATCCTTTGAACCCAGACGTGTTCACAGACGCAGATTTTGTGGCTGCTGAAATTTTAAACAGCAGTGAATTAGTAGTGTCAGAAGAAGAACGGCGCGAACAAGACAACAAAACTCCTGAAGCTCAAATCATAATATTTAGCACAGAGCCTAGCGATCCACACAAATCAGCCCCTACTTCACCATCACTTCTCACCGATCATATCCAAACAGAACCAGCAAATAGTGCTGCGGCGTCATCCCAAGTCCTACAACCGATAAAAGACAACGCCGTTCCCTCAACTTCAGCGGTCACTGCTAAAGAACTGCTACCAGTTCCAAAAAAACCCACAAATAAAAAGAAAGTCCAGAGAGCCACACGAAAACAGCATGCAACAGTCCTAACAAACACTCCAAACAAGGAAGCTCTGATAAAAAAAGAAGAGAGAAGAGCGACAAGAGAAAATAAAAAAGAAACTGGTGCTAAAACAAAAACAGGAATAAAGACGGCGAAGAAAAGACCAGCTAAATATAATAATGTACGAAAGGCGAAAAAGAGAGTTCTCCAAGACAAAAATAAGGATGAGATGTCATCAGAGTCTGAAATCGAAATGGTTGACGTACGCGATGACGATGACGACACCGATGTTGAAGATCTGGAGAATAAATGCTTGTTATCTGGTTCCCGCTTCACCGTCTCAGCCAGCAACCCTCAGCTGAACAAGCCAGCGGCAATGGCCGGCAGTATGAAGATAGCCAAAGAGGTCATTGAGGAGGTGGACGAGCAAGCCACCATCACGAGTATGGCTAAGCGCCCTGAAGTCAGACCGACAGCGATGAGTCTATTTACGAATATGCCCCCGCCGAGCGATCCTGTAGATGTTCCTTCCATCAACTCGAACCAAAATCATACGACCCGATTATCATCCTCTGCCCCTAATCCTTGGGGCTACGTGCGTCCAGCAGGCGACAATAGTCCCGTGGCAGAGTCCTTAGGCGTTCAACACGGTTCGCTGGGAAGCATCGGCGAAGCGCGTGCTCGCTTGGACAGCGACGTGGGACCAGATCTTAGCGCAGCTGGCAGTCATACGCAGATGGACGAAATTGATGGTGATGACGATGATGGCATGGACGACTTCGAACGACTCAAAAGTAAACGAGAGAAGGAACGGCGGATTAAATACTCACAGAAACTCATGGCTAGATCAGTCAGTGCTCAGCAGCGGACGGGAAGCTTGGACATGATTGACAATGATATTGTGCTAGAAGACCTCCTGATGCAATCCGCGGCGCTAAATAAAGATGACAATACAAACGACACTTGA
Protein Sequence: MTVTYTGEVATCRGFGTFLKVLYRWKGSIYKLVWLDLLMFLLVYYILNLTYRLILDEERKRIFEGVVNYCSFHGNVIPVSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERGRLMRRTIVRYVCLCLTMVLTMISPRVKKRFPTLNNLVEAGLLMDNEKSILDNLNVKFPKPTKHWLPIVWATSIVTRARKEGRIRDDFAVKTIIDELNKFRGQAGLLLSYDTISVPLVYTQVVTIAVYSYFMTSALGSQWVDHKLQSSSTEASISNIDLYFPIFATLEFFFYMGWLKVAESLINPFGEDDDDFEVNWLIDRNLQVSYMIVDEMHHEHPELIRDQYWDEVFPSELPYTIATENNREEHPEHSTARIAVPVRQRSMVFTTPSQIQIDKMVPSNTVSYKFDPPEQLQMNDDAISGIHFNVSRGSRRGKKEDRNSMGSNNSMASLAQQTPMPRTNSVTSMLKRLFSKEEQKGNAQIDGSTMSGTRSRSKEVKVKWSQEDLNRAFKLVEKGTTIREAARSNGIPFSTLQERLKKKNSEFPEMGRKPVFTKEQEAEMADQVATIPKAEAGFASTGIYPLNPDVFTDADFVAAEILNSSELVVSEEERREQDNKTPEAQIIIFSTEPSDPHKSAPTSPSLLTDHIQTEPANSAAASSQVLQPIKDNAVPSTSAVTAKELLPVPKKPTNKKKVQRATRKQHATVLTNTPNKEALIKKEERRATRENKKETGAKTKTGIKTAKKRPAKYNNVRKAKKRVLQDKNKDEMSSESEIEMVDVRDDDDDTDVEDLENKCLLSGSRFTVSASNPQLNKPAAMAGSMKIAKEVIEEVDEQATITSMAKRPEVRPTAMSLFTNMPPPSDPVDVPSINSNQNHTTRLSSSAPNPWGYVRPAGDNSPVAESLGVQHGSLGSIGEARARLDSDVGPDLSAAGSHTQMDEIDGDDDDGMDDFERLKSKREKERRIKYSQKLMARSVSAQQRTGSLDMIDNDIVLEDLLMQSAALNKDDNTNDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -