Eabb009660.1
Basic Information
- Insect
- Eupithecia abbreviata
- Gene Symbol
- -
- Assembly
- GCA_943735975.1
- Location
- CALSER010000071.1:1281101-1290312[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-11 2.7e-08 33.6 0.0 1 35 217 251 217 257 0.93
Sequence Information
- Coding Sequence
- ATGGCAGTCGAAAAACTTGAAATAGAGACTTATTTTGGGAAGTGTAAGTGTTGTCTCAAATTTGGCTATCTGAGACCTATGTGGGACGAAAATGAGGACGAGCATGAAGTGTACGGGAAGATGCTCACGCAATGTTTTTCTATTCCGTGGACTATAGAAGTATCCGAGGAAGACGATCAGATCTGCGAGGATTGTATTTGGAAGCTACAAGAGGCCAACAAGTTCAAACAACAGATTCTGAAGTGTCGTTCTGTATGTACTCAAGACCAACAAATAGAAGTTGTATTAGAAGAAATAAAATCAGAACCAGAAGAGGCGTATGACGTTGAATACCTGGACGAAGATCTTTTGCACAAAAATGTTGAAGACACGGGTAATAATGAACAGAACGGAGACTATGATGCCGATTATCTTGAAGATATGGAAACACTTGATGATGACGATGAAAATCATGATGGTGGATCGGATAAATCTGATTTGGACGAGGATGATGATGATGAAGAATATATAAAATCCGACGCACCTAAACCTACGTCGAGAAAGCGGACGGCGCCGGGACGGAGCGCTAGGGCCGACGCGGCCACACCCAAATCCAAATGGCCTAAGAAACTGCCTTTGGAGGAACGATGGAAGACTTATAGGCAGTACACTGACGACGACATGAAGTTGGCTATCGACGAGGTGATGAACAAGACAATGAGCCAGAGACAAGCAGCGCTGAAGTTCAACGTGCCCGTGAAGACTCTGAGCGCCAAGATAAGAGCTTTCAAAAATTCGGAGGAAGCAAGCCCATCAGACGAAAACGAAGCCACGGCGATCATACAGAAACATAGAGAGAACTTGCAATCAGTACTCGCTTACTCCAACGCGACGCCTATACGAGGCTTTTGGGGTATGGGCTACGTCTGCTCGATATGCCCCCATCAATTCGCCAAGCCATCTGAACTGAAAACACACACACAAAAACATGGAGACCTCTGCCAACTATTCAAAATCAACCACGTCAGAGGTCATATCGCTAGACTGGACGTAACCAACCTGATTTGCAATCTTTGCAACACGAAATTTGTGAAGCTGCAATCCCTTATGGAGCATCTTAAGATAATACACGGAAAACCTATGCATTTCGATATAGATAACCATATGGTGCCTTTCAAATTCGATTCAGATTTGCTACAGTGCGCGGATTGTCCAGACACGTTTAAATACTGCAAGAAACTGTCCGAACATATGGCCAACAAACATTATAGGAACTATATCTGCAAAGATTGTAATAAGGGTTTCTTTAATCTTTCCCATCTGGCTGGGCATAGAGAAACGCATCAATCTGGCGAATTCCGCTGCGGCAAATGTGGGAAAGTCTTCATAACACTACGGAAGAAGTCCAAACATGAACGCTTGCATGTCGTTCGGGGGAAAAACTTCAAATGTAAATTCTGTGAACTTTGGTTCTTTAATGCAACACAGAGATATAACCATGAATTAAGAATGCATGCGAACGATAAGCTTGAATTCGACTGCAGTTATTGCGACAAGACTTATGCAGTGCTGAAAAATCTTCGTGTACATATCAACGAAGTCCATTTGGAGACGAAGAAACATGAATGTCCTGTGAAAACTTGCGAGAAATCTTTCTATCTTAAGCGAACGCTCAAAGCGCATGTTAAACAGCACGATTTCAAACGTTTTCAATGCCCAAGATGCTTTAAGATGTTCAAATCAAGTGTTACGCTCAGAGATCATATGCCATTACATACGAGTAAGAGAGAAAGGAAATTCCGGTGTGAGGAGTGTGATATCAGTTATTTGAAGAAGGATAATTTGAACAGGCATATGAAGAAGCATCATTAG
- Protein Sequence
- MAVEKLEIETYFGKCKCCLKFGYLRPMWDENEDEHEVYGKMLTQCFSIPWTIEVSEEDDQICEDCIWKLQEANKFKQQILKCRSVCTQDQQIEVVLEEIKSEPEEAYDVEYLDEDLLHKNVEDTGNNEQNGDYDADYLEDMETLDDDDENHDGGSDKSDLDEDDDDEEYIKSDAPKPTSRKRTAPGRSARADAATPKSKWPKKLPLEERWKTYRQYTDDDMKLAIDEVMNKTMSQRQAALKFNVPVKTLSAKIRAFKNSEEASPSDENEATAIIQKHRENLQSVLAYSNATPIRGFWGMGYVCSICPHQFAKPSELKTHTQKHGDLCQLFKINHVRGHIARLDVTNLICNLCNTKFVKLQSLMEHLKIIHGKPMHFDIDNHMVPFKFDSDLLQCADCPDTFKYCKKLSEHMANKHYRNYICKDCNKGFFNLSHLAGHRETHQSGEFRCGKCGKVFITLRKKSKHERLHVVRGKNFKCKFCELWFFNATQRYNHELRMHANDKLEFDCSYCDKTYAVLKNLRVHINEVHLETKKHECPVKTCEKSFYLKRTLKAHVKQHDFKRFQCPRCFKMFKSSVTLRDHMPLHTSKRERKFRCEECDISYLKKDNLNRHMKKHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700956;
- 90% Identity
- iTF_00696736;
- 80% Identity
- iTF_00696736;