Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.9 4e+04 -4.3 4.2 15 27 73 85 54 89 0.74

2 3 1.7e-17 1.2e-13 51.8 2.1 1 34 98 130 98 132 0.97

3 3 3.2e-19 2.2e-15 57.3 6.9 1 34 151 183 151 185 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.9	4e+04	-4.3	4.2	15	27	73	85	54	89	0.74
2	3	1.7e-17	1.2e-13	51.8	2.1	1	34	98	130	98	132	0.97
3	3	3.2e-19	2.2e-15	57.3	6.9	1	34	151	183	151	185	0.97

Coding Sequence: ATGAGTCGGCACAGTGAGCGGCACCAGATCTGCCCAATGCTAAAAAAAATTGCTGAGTCGACATGGGTATGTCTAGGCCACGAATTAAGTCACGAGCGCGTCGCGGAGCACGCGCGGCCTTGCGCCGCCGCCGATTCAGCGCCTCGCTTAACCGGCCATTGTCAAGGTTGCGAGTGTAAGTGGGACGCTCGGTCGGCACCGTCGGGGGTGCGAATGGCGAGGCAGCGTGAGCTAATGGTGTGTTGCGCATGCGCAGTCGAGATGGCGGAGCTAATCACGGAGGTTCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGCCATCGGGCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGATGGGCACGAAGCGGCCGGGCATGTCGTGCAGCAACTGCCACACCACTACCACGTCGCTGTGGCGCCGCAACGCGCAGGGTGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTCCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATACAGACCCGAAAACGGAAACCTAAGAACAGTATGAAGGCGGAAAGGAATATCAGCAAAGGTCTCGTTAACGCGGCGCACGCGGTGCACGGCGCGCACAACGCGCACAACACGCACACGGTGGGGTCGGTGAAGATCGAGAATTTAATAGAGGGAGGCTCCGGCGTCGGCGGCGCGAACGGCGCGTGTTCGGGCGACGCGCGCTCGCCGGTCTCGCTCGGCTTCTACATGCAGCAGCACGCGAACGTGAAGCTGGAAGACCCGCCGCCGGCGcacgcgcaccacgcgcaccaGCCGCACCAGGCGCACCACGCGCACCAGTCGCACCAGGCGCACCAGGCGCACCAGCCGCACCACGCGCACCACTCGCAGCCCTTCTACGAGGACGAGTACCGGCGCGCCGACCCGCAGGAGCGCCACGACCGCTCCAACAACGGCTCGATGGGCAGCTGA
Protein Sequence: MSRHSERHQICPMLKKIAESTWVCLGHELSHERVAEHARPCAAADSAPRLTGHCQGCECKWDARSAPSGVRMARQRELMVCCACAVEMAELITEVRECVNCGAIHTPLWRRDAIGHYLCNACGLYNKMNGMNRPLKQPRRLMGTKRPGMSCSNCHTTTTSLWRRNAQGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKAERNISKGLVNAAHAVHGAHNAHNTHTVGSVKIENLIEGGSGVGGANGACSGDARSPVSLGFYMQQHANVKLEDPPPAHAHHAHQPHQAHHAHQSHQAHQAHQPHHAHHSQPFYEDEYRRADPQERHDRSNNGSMGS

Sequence clustering based on sequence similarity using MMseqs2