Basic Information

Insect: Euphydryas editha
Gene Symbol: Mtf1
Assembly: GCA_036937285.1
Location: JAUPFZ010000007.1:6156651-6165768[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.6e-05 0.0038 18.9 0.7 1 23 108 132 108 132 0.99

2 7 0.0019 0.27 13.1 0.2 1 23 138 162 138 162 0.95

3 7 0.00012 0.018 16.8 0.5 1 23 168 192 168 192 0.96

4 7 6.1e-06 0.00087 20.9 2.3 1 23 197 221 197 221 0.96

5 7 1.1e-05 0.0015 20.1 2.5 1 23 227 251 227 251 0.97

6 7 8.1e-06 0.0012 20.5 0.2 3 23 259 281 257 281 0.90

7 7 1 1.5e+02 4.5 3.0 2 23 649 672 648 672 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.6e-05	0.0038	18.9	0.7	1	23	108	132	108	132	0.99
2	7	0.0019	0.27	13.1	0.2	1	23	138	162	138	162	0.95
3	7	0.00012	0.018	16.8	0.5	1	23	168	192	168	192	0.96
4	7	6.1e-06	0.00087	20.9	2.3	1	23	197	221	197	221	0.96
5	7	1.1e-05	0.0015	20.1	2.5	1	23	227	251	227	251	0.97
6	7	8.1e-06	0.0012	20.5	0.2	3	23	259	281	257	281	0.90
7	7	1	1.5e+02	4.5	3.0	2	23	649	672	648	672	0.93

Sequence Information

Coding Sequence: ATGGCTGCATGGCTCAGTGACAGCGCCTGTACAGAAATCAATACCACAATCAATACACAGAACAATACCGATAACTTCTTATTGAAAAAATTCAGCCAAGATGACCATAGCGATATAACTAAggaattatataataaagtttctGGAAATTTCCCTAGTATCGACAAAAAAATCTCAGTGGACAGTGTGACGCCGAAAATTCAAATTGAAATAGTATCCAGTAACAATGAGAATTTCAAAGATATATCAAAGGCAAATATTGAACTGCCAAAGTCAATTATGGACAAAAACAAACGCCGAGTGGAAGATAACACGTCAAGATATAAATGTGACTATGATGGTTGCGAAAGGACATATAGTACGGTGGGAAATTTGCGCACCCACTTGAAAACACATAAaggTGAATATCGGTTTATATGTCCAATGCAGTCATGCGGCAAGGCATTCCTCACTTCGTACAGTCTAAAAATACATGTACGAGCCCATACAAAGGCAAAACCTTTTGCTTGCAATATCGGAAACTGTAATAAAGCTTTCAATACCCTGTACAGACTAAGAGCACATCAAAGACTACACAGCGGTGACACATTCAATTGCAAAGCAGACCGCTGCTCGAAATTCTTTACAACACTAAGCGACTTGAAAAAACACATTCGTACACATACACAAGAACGGCCTTACAAatGTGTAACTGAAGGCTGTGGTAAATCGTTCACCGCGTCGCATCACTTGAAGGCGCACGCGCGCACGCACTCCGGCTCGCGGCCGCACGCGTGCGCCGCATCCGGTTGCGGGAAGGTTTTCTCGACACCCACTAGCCTGAGAGCCCATGCGAGAAAACatcaaATCGAAGCCGAAACGCCGACTGTGGAAGTAACAGAAAATGAACCACCAAAACAAGATTCCGATATCATGAACTGGGACAGTTTACTCGAATCATTCGGTAAAATAACAACCGAATCGAATTCCACCGATGGCAGCTTAGAGGATATCACTAGTGTCAATCCCCTCTCTAATAACAACATGGATATAACAGAATTGCTTTTTAACAATGCTAACGATCCTAAATTTTCTAACACTAATAACCTTGCTGTTGATTACGATTTGAGTAATCTTGAAGTGCTCTCTCCATTTAATGTAGATAAAGTTATCAAAAAAGATACCAATGATAATAATTGGGTTGATGTTCGCGATTTACAACCAATTGTAATATCAGAAcctaaaattgaaattaaatctaAAGCAGTGCAGCTTGCTTTAGCCAATGAAATCGAATTGCAAGCACCGTGGATAGACGTTACTGCATTAGCATCATCAATACAAGAAACACCTGTAAGCATCAAAGATAATACTCCAGAAAACATATTTACTCTTGCGACATCTGTTCCAACGCATATGCAAAGTTATATAGATCTTAATCCTGAAGTTATTCCAATTGCCAATATAACATCACATAGTACTTTCGATTTGGACACGCCAAATATTCTAGATATAAGTGATAAAGTTTTCAATGACAGTGAATTGGTAACAAACTTGGATCCAGATAAAATTGACACAGACATTGAATTTATGAAAAACCACAACCAAATAGATGACAGAACATTAAACACACCTCCGCCGACTAAAGTACAgcataatatagaaataaatccGGCAAATTCGGTTTCATTTAATACGGATTTAACTCTTGAACATACATTGTTATTTGATAATGAACCTCCTTCAGATATGTATGTCGTACAAACAGAAAATATATTTGGTAAAAAGGCAAGAAATCCTTTAGAACAGTTAACTGCTGATGCCGGTATTTGTTCATGCAGTGAATGCAAATGTGAGCCAAACAATGGTGAGTGTAGAAATTGTCAAGAAAATAAGCCAATAGAAAAAACTAGTTGTGATGATAAGTGTTCATGTACTGATTGCAAGTGTAATCATGCAGAAATGAAATGTGCCATCGGTTGTGGGAAAGCGACAGACACAAATCACAATACATTTTTGCACTATCATCGAAGACATAATAATTCAAATCTTGAAGATTTCGGTGTTTATACACATGAATGTGATGATTCATTTcctaatatcataaataatataaaatgttcatGTAGTAATAGTAGCCCGGACGAAATTGCTACTAAAAATACAAAGTCTGATTCATGTTGCAGTTCTAATACGAAATCTTGCTGTGTTACAATTTGCTTTAAGAAATTGGATgcttttaaacaatttctatcCGATTCGGATTTATTGAATGCTCTCAAAGTGAATAATTTGAATTTGAGCACAGGCTAG
Protein Sequence: MAAWLSDSACTEINTTINTQNNTDNFLLKKFSQDDHSDITKELYNKVSGNFPSIDKKISVDSVTPKIQIEIVSSNNENFKDISKANIELPKSIMDKNKRRVEDNTSRYKCDYDGCERTYSTVGNLRTHLKTHKGEYRFICPMQSCGKAFLTSYSLKIHVRAHTKAKPFACNIGNCNKAFNTLYRLRAHQRLHSGDTFNCKADRCSKFFTTLSDLKKHIRTHTQERPYKCVTEGCGKSFTASHHLKAHARTHSGSRPHACAASGCGKVFSTPTSLRAHARKHQIEAETPTVEVTENEPPKQDSDIMNWDSLLESFGKITTESNSTDGSLEDITSVNPLSNNNMDITELLFNNANDPKFSNTNNLAVDYDLSNLEVLSPFNVDKVIKKDTNDNNWVDVRDLQPIVISEPKIEIKSKAVQLALANEIELQAPWIDVTALASSIQETPVSIKDNTPENIFTLATSVPTHMQSYIDLNPEVIPIANITSHSTFDLDTPNILDISDKVFNDSELVTNLDPDKIDTDIEFMKNHNQIDDRTLNTPPPTKVQHNIEINPANSVSFNTDLTLEHTLLFDNEPPSDMYVVQTENIFGKKARNPLEQLTADAGICSCSECKCEPNNGECRNCQENKPIEKTSCDDKCSCTDCKCNHAEMKCAIGCGKATDTNHNTFLHYHRRHNNSNLEDFGVYTHECDDSFPNIINNIKCSCSNSSPDEIATKNTKSDSCCSSNTKSCCVTICFKKLDAFKQFLSDSDLLNALKVNNLNLSTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00985545;
90% Identity: iTF_00985545;
80% Identity: -