Eedi016974.1
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- zfy1
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000012.1:18978115-18995332[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 6.9 9.9e+02 1.9 0.2 2 23 6 27 5 27 0.93 2 13 0.97 1.4e+02 4.6 0.8 1 23 1004 1027 1004 1027 0.92 3 13 0.0002 0.029 16.1 1.8 2 23 1129 1150 1128 1150 0.96 4 13 0.00015 0.022 16.5 1.8 1 23 1156 1178 1156 1178 0.98 5 13 0.015 2.1 10.3 2.8 2 23 1185 1206 1184 1207 0.95 6 13 0.61 87 5.2 1.0 5 23 1220 1238 1219 1238 0.96 7 13 0.018 2.6 10.0 1.1 3 23 1245 1266 1244 1266 0.96 8 13 0.0051 0.73 11.7 0.1 2 23 1284 1304 1283 1304 0.97 9 13 0.0037 0.53 12.2 1.8 1 20 1310 1329 1310 1332 0.88 10 13 0.0074 1.1 11.2 1.4 1 23 1340 1362 1340 1362 0.98 11 13 0.0053 0.76 11.7 7.2 1 23 1368 1390 1368 1390 0.98 12 13 6.2e-06 0.00089 20.9 1.3 1 23 1396 1420 1396 1420 0.98 13 13 0.00097 0.14 14.0 5.1 1 23 1426 1448 1426 1449 0.95
Sequence Information
- Coding Sequence
- atggatCAAAGAGTGCAATGTCCTGTGTGTACACTGTACCTTCACAGTGGAATTACCTTAGAGTCGCATTTGGATACGCATCCAAAAGATCAAGTGATAAAGGCTCTCTGTAATTTATCAGCTAAAAATACCAACTTTGGAAGTAGGACACCTACACCATTAAACTCAGAGAGGTCATATAGAAGTAGGTCACGGACGCCGGCCACCGATGACAGTGGAAGATGGAATAATTCTCATCGCAATAGTGATAATGAAAGATATTGGAGAAGGACTCCAAGTAGAACAAAGTCAACTCCACTCTCAATCTCAAGAAATGCAACACCGGATCTGAGAATTGGAAATATTACTTTTGATAATCATAATTCCAACAATGTTTCAAGCCACCAGAGCCAGTGCTCTGACACATATACAGTGAAATCGGATAAAACACAGCAAACTTTTACTTCAAACTGTCAGTCGATGGTTTCAGAATTAGATCAACACTATCCATACTATCCAGAACCACAGGAAGACCCAGAAATTAAGTTTTCTCGAAGTTCTGAATATAATGCACAGTTAGACAATTCAAATAATGTGTTTTCATATAATATGCCTGTCGTTGGAACAGGTGTCAAGTTACCGAATGCAATGATGCCAACAGTGCCTAGAAGAGGAAATGAGTTTGTTAAGATCGTACCTAAACAAGGAAACCTACTTGTTAAAACTAATATGGCTGGCATGCAATACATACCACCGGGAGTGAAACCAATGCATGTGATGATGCCTACTACGGCTCCATTTGTCCAAAAGAATCTACAAAACAACATGATTATGACTGGAAATTTACCTACAAGTCAATTATTGGACCCTAAATTAATAGCACAACCATTAAACAACCAATTTAATCAAATGAATCCAGGAGCTTTCACCCCAGGGACAACGGTAGTCACACAAAACTCGCAAATAATTTACAGAGAGATGGTTCATAATATAGATGGTAAACCATTTATTTCAAGTATGCCCGCAGTACTAGGTGGTCCAGAGAATGTCACAAATGTCGCTCAGAGCAGTTCAATGTACCAAAATGTTATGGTGGTTGATCAGTTTGGAAATGCTTCATGTATGTATACAACACCACAACATGTAGTATCAAAACCCTGTGCTCCTGCGTTTAATGAAAATGGACCTTTTATGCAAAATGTGCCAGAGAAAACTGTGCCTACTGTAGTCAATGATGCCAATAAAACACTAATCATTGAAGTGAGTCCAATGTTATCGTCAGAAAACATAAATGGTACTGATGCAAGTCAAAATTCATTGCAACAACAAAGAGACAAACcagtaaataaaaaagtcgAGCAAGAAAAAACAGAACCTAAAATTGAATCCCCCGGGCCTAGTAAAGGTTTAAAAATTCTAAGCAATATTAAGGTAGAGGTTCCTGTGCAGCATCACAAAAATATGCTTAATACTGTGATGGATTTAACTGGTTCAACTGACTCGGATTATCCTGAACGCTCCATTACTCCAGAGAACATATTACCGGACTCAGATGATCGCAATCCTAGTTTATCTAATGATTGCACTCAACCTTCTAATTCTAGCGGTAATAGTTTAGCATCCAGCTCATTCTCTGTGTTAAAAAATACAAGTAACACTCAAAGAGAAATGTCTTCAAAGTCAACGGCTGTAGAAAATAAACTTGACACAGAATTTTCAGACAGTTGTCCTGTTCCTGATCTGATTTGTAATGAAAAGCCATCTATATCACCATGTAGTGAATTGTCCGAACAAGACGATTCCAGTGATCGACTTATTATCTCTTCTCCAATACCAGAAAGTAGTCAATCATATCACAGTCcggtaaataatataaatgttgaaAAGAAATTACCAATAAAACCACAACGACATCATCCTCTACGGctaaataacatttttgtaaagaaaaataaaaaagttttgcaAATAAAGAATTCTAAAGCATTTTCACAGTTTACTACAAAACCAACTGAACAAGAACCTCGGGCATCCACTTCTTCAAGTAAACCTTCGGAACACATTGCAATTAATAAAACTCCTGGAGTTATAGAGAAGTGTGATGCGAAAGGTAAATTACAAACAgtgttaatagaaaaaaatgagaataataatgatgatgaaaataatgAATTCGACGCTAACACCGAGGTACAGTCGATGGATATAGAGCCAGTTACGCCGTCCAATGTTAACCATTCCTCTCAATACAGTAGTTCTGTGGATATGGTCCAAGTTAAAGAAGAAATCAATTCTAGTAATGAATTTAGTAATGGAACCGACAGGTCTACAGACCTCGCACCAATGGAGACTCTCAGGCCGATCAACGTAGTCAATTACAGCAATATGCCGGGAGAACTTGATGACGACTCGAATCACAGAGAACTATTAGAGTTAGAAGCTGCGtccaaaaataaacaatttgtaTCTATGATGAACGAAAACTATTTTGGGGATAACATTTATGCAGACTATTTCACTCCGGATCGCGTTGAAGCGTTCGATGCGGAGAAAGAGTCTAATTATGTTAAAGAAAACGCAAAGGACGGAATGTACATTTGGGGTGAATCATCGCATAAGGAAAGTGAATTCATTTTACCCAATTTCATTCACGAGAGTTACAAAATAGCTGAAAGTAATGGAATGGATTACTCCGAAATGGGAGCGGGGGAGGGACAGATGGACCGTGACGTCGATAGGTGTGAACGGGACAGTAAAGCCGATGTATTAAGTGAGAGTAGGAGTGAAGGCGAGCCAGCTCTGAACATCTGCGCCGATGAAAGAATGCCGCCTCGTGGGGAACTCAGTGGACAAGAGAGCAACGGGGACATGGAGTCACCTTGGAGTGGGATGTATTCGGGAGTACCGCCAGCGGAGCATTACGATCTAATGGCGCGAGAGAGCTGGGTCTCGGATGGGTCCGATGTGGACGCCAACGAGAAAACAGAAAATGTCATCGAAGAACAGATCCACTTCCCGAAAACGAGGACGTACACCTGCGCGCAGTGCTGCGTGAAGTTCCCGTCGCTGAAGGAGCTGCGCGCCCACAAGGCGCTGGTGCACGCGCTGCCCGGCTCCAGCTCCAGGACCTCGTACAGCCGCCTCGTGACCGCGCGCGCCATCAAGAAGGAGGAGAAGCCGGACGACCATGTGCTGACAGGTAATTTACTGTCGCTGGATACAAAAGAGGGTATGGCTTCAACGATGCTGCAAGTTTACAACGCGATGAGCGAGACGAAACCTCAAATCGAGGGTTTCATAAAGCAGGAACCGAAGAAGAGGAGGAAGGGCTATGTGTGCCCGACTTGCAAGGTGGACCAGTTGAGCGAAGCCGCCTTCCACGCGCACCTCAAGCTGCACCCGCTGGAGTGCCTCACGTGCGGCAAGTGCTTCTTCAAGCGCGCCAACCTCGCGCTGCACGTCAAGACCCACCTCGGGATAAAGAACTATAAATGCGAGGTGTGCGAGAAGCGGTTCATCACGCGGCAGAAGCTGGCGGAGCACCACAACGTGCACACCGGCCGCGCGCCCGTCAAGTGCACGCTCTGCGACGACACCTTCCGCAGATACTCCAACATGGTGCAGCACAGAGACCGCCACCACTTCAAGAAGAAGACGAAGGTGCGCGACTTCGTGTGCCAGTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTGCTGTGGCACAAGGAGACGCACGACGAGAAGCCCAAGGCGTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTTCCTGTCCGAGCGCGCCGAGAAGGGCCGCGTCGAGAACGTGCCCTGTCCCGTCTGCAAGCAGATGTACCTCAGATCTAATCTGCGTGCTCACCTATTAACACACAGTGGAAAACGCCCGTACCACTGCATCATTTGCAATAAAGCTTTCACAACAAAGTGGAATCTGAAACTTCATCGCTGGACGCACCTGAGCCGGTCAGCAAAACCGTTCAAATGCAACCTGTGTAAGGGCGCGTTCATACGACACACGGATTACGTGTCGCACATGAACGCGCACAAGTCCGTTCGCCCCTACACGTGCAACTACTGCGGCTGCCAGTTTATAAGGAAGTACAACTGTCAACGACACGTCAGGGAACATGAAATGgcaaaaaaatatgtgtgtaaAGTGCCAGAGTGCGGTAAATCGTTCCATAGGAGTTATTATCTGTCTGAACATATGAAAGTGCATAGTGGTGCGAGGCCTTTCTCATGTAACATTTGCGGGAAGACGTCTAGTAACAAGTCCAATCATAATAAACACGTGAAGATACATCACGCGCGGGAGCCCGTGGCGACTGAGGCGTAA
- Protein Sequence
- MDQRVQCPVCTLYLHSGITLESHLDTHPKDQVIKALCNLSAKNTNFGSRTPTPLNSERSYRSRSRTPATDDSGRWNNSHRNSDNERYWRRTPSRTKSTPLSISRNATPDLRIGNITFDNHNSNNVSSHQSQCSDTYTVKSDKTQQTFTSNCQSMVSELDQHYPYYPEPQEDPEIKFSRSSEYNAQLDNSNNVFSYNMPVVGTGVKLPNAMMPTVPRRGNEFVKIVPKQGNLLVKTNMAGMQYIPPGVKPMHVMMPTTAPFVQKNLQNNMIMTGNLPTSQLLDPKLIAQPLNNQFNQMNPGAFTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPAVLGGPENVTNVAQSSSMYQNVMVVDQFGNASCMYTTPQHVVSKPCAPAFNENGPFMQNVPEKTVPTVVNDANKTLIIEVSPMLSSENINGTDASQNSLQQQRDKPVNKKVEQEKTEPKIESPGPSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGSTDSDYPERSITPENILPDSDDRNPSLSNDCTQPSNSSGNSLASSSFSVLKNTSNTQREMSSKSTAVENKLDTEFSDSCPVPDLICNEKPSISPCSELSEQDDSSDRLIISSPIPESSQSYHSPVNNINVEKKLPIKPQRHHPLRLNNIFVKKNKKVLQIKNSKAFSQFTTKPTEQEPRASTSSSKPSEHIAINKTPGVIEKCDAKGKLQTVLIEKNENNNDDENNEFDANTEVQSMDIEPVTPSNVNHSSQYSSSVDMVQVKEEINSSNEFSNGTDRSTDLAPMETLRPINVVNYSNMPGELDDDSNHRELLELEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAEKESNYVKENAKDGMYIWGESSHKESEFILPNFIHESYKIAESNGMDYSEMGAGEGQMDRDVDRCERDSKADVLSESRSEGEPALNICADERMPPRGELSGQESNGDMESPWSGMYSGVPPAEHYDLMARESWVSDGSDVDANEKTENVIEEQIHFPKTRTYTCAQCCVKFPSLKELRAHKALVHALPGSSSRTSYSRLVTARAIKKEEKPDDHVLTGNLLSLDTKEGMASTMLQVYNAMSETKPQIEGFIKQEPKKRRKGYVCPTCKVDQLSEAAFHAHLKLHPLECLTCGKCFFKRANLALHVKTHLGIKNYKCEVCEKRFITRQKLAEHHNVHTGRAPVKCTLCDDTFRRYSNMVQHRDRHHFKKKTKVRDFVCQCGAVFHSRAKLLWHKETHDEKPKACLYCSDKFVHAASLTRHVRRSHNEYFLSERAEKGRVENVPCPVCKQMYLRSNLRAHLLTHSGKRPYHCIICNKAFTTKWNLKLHRWTHLSRSAKPFKCNLCKGAFIRHTDYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01506613;
- 90% Identity
- -
- 80% Identity
- -