Eedi033064.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euphydryas editha
Gene Symbol
Zfpm1
Assembly
GCA_036937285.1
Location
JAUPFZ010000026.1:2586813-2607680[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.23 32 6.6 1.0 3 23 136 157 134 157 0.92
2 27 0.024 3.5 9.6 2.5 1 23 266 288 266 288 0.99
3 27 0.00023 0.033 16.0 0.9 1 23 294 317 294 317 0.96
4 27 0.055 7.9 8.5 4.7 1 23 322 345 322 345 0.94
5 27 6.7e-06 0.00097 20.8 0.2 2 23 517 538 516 538 0.97
6 27 0.00033 0.047 15.5 1.3 1 23 544 566 544 566 0.99
7 27 0.00033 0.047 15.5 1.3 1 23 592 614 592 614 0.99
8 27 0.00027 0.038 15.8 2.2 1 23 640 662 640 662 0.99
9 27 0.00033 0.047 15.5 1.3 1 23 688 710 688 710 0.99
10 27 0.00027 0.038 15.8 2.2 1 23 736 758 736 758 0.99
11 27 0.00033 0.047 15.5 1.3 1 23 784 806 784 806 0.99
12 27 0.00027 0.038 15.8 2.2 1 23 832 854 832 854 0.99
13 27 0.00033 0.047 15.5 1.3 1 23 880 902 880 902 0.99
14 27 0.00027 0.038 15.8 2.2 1 23 928 950 928 950 0.99
15 27 0.00033 0.047 15.5 1.3 1 23 976 998 976 998 0.99
16 27 0.00027 0.038 15.8 2.2 1 23 1024 1046 1024 1046 0.99
17 27 0.00033 0.047 15.5 1.3 1 23 1072 1094 1072 1094 0.99
18 27 0.00027 0.038 15.8 2.2 1 23 1120 1142 1120 1142 0.99
19 27 0.00033 0.047 15.5 1.3 1 23 1168 1190 1168 1190 0.99
20 27 0.45 65 5.6 4.9 1 23 1250 1272 1250 1272 0.96
21 27 0.0018 0.26 13.2 1.9 1 23 1307 1329 1307 1329 0.95
22 27 0.00074 0.11 14.4 2.2 1 23 1335 1357 1335 1357 0.97
23 27 0.0013 0.19 13.6 2.9 1 23 1366 1388 1366 1388 0.99
24 27 0.00087 0.13 14.1 0.6 3 23 1436 1456 1435 1456 0.97
25 27 0.098 14 7.7 5.8 1 23 1473 1495 1473 1495 0.95
26 27 2.7e-06 0.00039 22.0 0.7 1 23 1501 1523 1501 1523 0.98
27 27 9.3e-07 0.00013 23.5 3.1 1 23 1529 1552 1529 1552 0.98

Sequence Information

Coding Sequence
ATGAATGAAAACATGGCACCCGAGATGGATCCATTGAGCACATACAATTTGAGCTCCTTCCATAATTTTGAAAGTTATGAAAATTTGCAATATGGAGAAAACATAGGCACTTACCcttataatgtaaaattagaACAATACCAAAACCATTATAATTTCTACAATAACATACCACACAGTAGTGCTAAGGCAGAAACACAACAAAATAACAGCAACTCAAGTAACAACACAAGCAATGCTAGCAACGAACAAATCCAACCAAATAACGCTAATAATAACCCAAACACAAACAATATAGACGTTAAACCAGATATAACACAAAATATCACTAGacggaaaataaaaaaagaaagaagcAAGTATTTCTCCGAGAAGATAACGGATAAAGACTATCCGTTTTATGGTTGTTCGGTATGTAGCATATCGTACAAAACGTTACACGAATTAGATACACACGTGACAAATAAACACAAAGATAGGATAACTAGTTACGATCTGAGAATAAAGAATCAAAttagaaagaaaaaattaaagaaggaacaaaagaagataaaaaagaaaatgaagaaTATCAAAATGGAGAAAGAGAACGAGATAGAGATAAAACCGGAAGAAGGTTACATCGGCAACGTAAAGGCAACGGACTTTATAAATAACACGGAATCAGACAACCAAAGCtctaaagaaaatgaaaacggTAAAACGAATGGAAAGGAAAATGACAAAAATGTTACCGAAACAATGAAAAAGGACGATTCAATAAATAAACAGGAATTACAgaatctacaaaaaatatacaaatgctTCGCTTGTCAGAAACAGTTTATGTTGagttattatttgaaattacaCGTCAGATCTCATACGgATGAAAAGCCTTACACCTGTGCACAATGTGGTCAATCTTTCATCACAGCCAGCAAGCTGGGACGGCACAATAAGAGATTCCACCTCGCTATCAGATATCAGTGCCGGATATGCTACAGATATTTCTCaagATTTGAATTTCTAACTCGCCATTTTGACAAGAAACACCCAGACGATAAGTTGGAAGGTGAACCATATgATTACAATGCAATATTGCCATATTTGAAGGAATTAGAAGAACAGCTCCGTGAAAAATCTGAAAGTGAAAAGGCAAAACCAAAAGATGACCTCTGGTCAAGTGACTGGCCTGTAAGCGATGTTAAGGACGACGTTAACGATTTGAAAGGGGATTTAATAAAAGAGGAGATGGAACTAAAAATTGAAGAGGTCAAGGTCGATATGGGGGATGTCCAGGTGAAGGAAGAGGAACTCGAGGATAGAAATGAGGATATGGATGACTTCAGGGATGATTTTAAGGATGATGTTCAAGATGACATCAAGGAAGACTTTACGGACGTCTTCAAAGATGACTTGAAGGATgaaaaCGCATCGGACGACGACTATTTCCCGTCGAACACGTGGGCGGTGCCCGTGCCGTCGCCTGGAGGCGGCGGGGTGGTAGAGGCGAGCGGCGGGGCGGGCGGGGCGGGCGGGGCGGCCGGGGCGGGCGGCGACCGGCTGCAGTGCGGCGAGTGCGGCAAGCGCGTGAGCAGCGCGTCGTACCTGCGCGTGCACGTGCGCACGCACAGCGGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCCGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCCGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCCGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCCGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCCGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCCGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGGTGGGTGTCGGGAGGGGGGGAGCTTGTGTAGGTACGAGGGATCCTGTAGCGAGCGCCCGTACAAGTGCTACGTGTGCGGCGCCGGCTTCATCACGTCCAGCAAGATGCACCGCCACGTGCTCACGCACCCGCAGTGCTGGGACGATGATCAAGTAAAATCTGAggatatagaaataaaatcgGAAAAGGAAGGTGATACGGCAGACGGAGACACTAAgaaATTAAAAATGAAGAAGGCGCTCGCGAAGTTCTCGAAAAAATCGAAAAGTTCggaaaagaagaaaaaacttTATCAAAAACGTCCCCACGCCTGTGAGTTCTGTCAGAAGAGATTTTTACACTTGGAGACGTTACAGGTGCACAAGAAGTCCCACGAGGGCGAGCCGCTGGTGCACAAGTGCACGTTCTGCCTGGCGGAGCTGCCGGACGCGGCGGAGCGCCGCGCGCACGAGGACACGCACAAGGGACCGAAGCCCTATCTCTGCACCGTCTGCGGGAAGAGCTACAAGAAGCGCGAGACTATGATCTACCACCGGAAGAACCACAAGCCGGACAAGGAGTACATCTGCGACATCTGCACGAAGACGTTCAACGCCCAGTGCAAGCTGCAGCGACACCTGGTGTCGCACCGCGCCgcgcgcttcgtgctgcgctaCGAGTGTCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTCTCCACGCACCAGAAGGAGGGCCTAATTCAAGAGGAGAACCGCAACGAGATACTAGCGATGGTTTTACAAAACGCAAGAAAAATACCGAAAACGCCCTACGCGCCGGCCTCGCTCACCGATATCGTACCATCAGACGAGCGGAGTCGCATATGCAACATATGCGGGGAAATATTCCAACACTTCTACTATTTAGAGGAGCATCTCAAGAGTCACGGCTCGAAGATAGCGATAGAGGACAACGAGCAGAACAAGGAGAAGAAGCATATATGCAAAGTGTGCAATAAAgggtttaaattacattattatttaaaactccATAGCTTCACACATACAAAGGAGAAGCCGTTTATATGTCAGCAGTGTGGAAAAGGGTTTATAACTAAGGGTAAACTGAAAAGACACTTAGAAACTCACACGGGGCTCAAGAAATACCAGTGTCACATATGTTATAAGTTCTTCACTAGACCGAGTTATCTCAGAATTCATGTCAGAACGATACACGGAACTCAAGATTATAATTTTAGACTCGAGAAACAGTATGGTTTGTCATCTGTACCGGTTGTGGGGCATAGCGTTTGA
Protein Sequence
MNENMAPEMDPLSTYNLSSFHNFESYENLQYGENIGTYPYNVKLEQYQNHYNFYNNIPHSSAKAETQQNNSNSSNNTSNASNEQIQPNNANNNPNTNNIDVKPDITQNITRRKIKKERSKYFSEKITDKDYPFYGCSVCSISYKTLHELDTHVTNKHKDRITSYDLRIKNQIRKKKLKKEQKKIKKKMKNIKMEKENEIEIKPEEGYIGNVKATDFINNTESDNQSSKENENGKTNGKENDKNVTETMKKDDSINKQELQNLQKIYKCFACQKQFMLSYYLKLHVRSHTDEKPYTCAQCGQSFITASKLGRHNKRFHLAIRYQCRICYRYFSRFEFLTRHFDKKHPDDKLEGEPYDYNAILPYLKELEEQLREKSESEKAKPKDDLWSSDWPVSDVKDDVNDLKGDLIKEEMELKIEEVKVDMGDVQVKEEELEDRNEDMDDFRDDFKDDVQDDIKEDFTDVFKDDLKDENASDDDYFPSNTWAVPVPSPGGGGVVEASGGAGGAGGAAGAGGDRLQCGECGKRVSSASYLRVHVRTHSGERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGARFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGARFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGARFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGARFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGARFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGARFITSSKMHRHVLTHPQCWDGGCREGGSLCRYEGSCSERPYKCYVCGAGFITSSKMHRHVLTHPQCWDDDQVKSEDIEIKSEKEGDTADGDTKKLKMKKALAKFSKKSKSSEKKKKLYQKRPHACEFCQKRFLHLETLQVHKKSHEGEPLVHKCTFCLAELPDAAERRAHEDTHKGPKPYLCTVCGKSYKKRETMIYHRKNHKPDKEYICDICTKTFNAQCKLQRHLVSHRAARFVLRYECPVCAHMFNTKYHVQMHLSTHQKEGLIQEENRNEILAMVLQNARKIPKTPYAPASLTDIVPSDERSRICNICGEIFQHFYYLEEHLKSHGSKIAIEDNEQNKEKKHICKVCNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRLEKQYGLSSVPVVGHSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-