Basic Information

Insect: Euphydryas editha
Gene Symbol: -
Assembly: GCA_036937285.1
Location: JAUPFZ010000008.1:7368377-7399525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00011 0.015 17.0 1.5 1 23 705 727 705 727 0.96

2 20 0.0073 1.1 11.2 0.7 1 20 733 752 733 755 0.94

3 20 2.8e-05 0.004 18.9 5.4 1 23 774 796 774 796 0.98

4 20 0.00024 0.034 15.9 4.7 1 23 802 824 802 824 0.99

5 20 4.4e-05 0.0064 18.2 5.3 1 23 830 852 830 852 0.97

6 20 1.4e-05 0.002 19.8 7.3 1 23 858 880 858 880 0.97

7 20 9.4e-07 0.00013 23.5 2.9 1 23 886 908 886 908 0.97

8 20 0.00013 0.018 16.8 6.7 1 23 914 936 914 936 0.97

9 20 0.00029 0.042 15.6 5.6 1 23 942 964 942 964 0.97

10 20 6.1e-07 8.8e-05 24.1 1.9 1 23 970 992 970 992 0.98

11 20 1.2e-05 0.0017 20.0 7.7 1 23 998 1020 998 1020 0.98

12 20 1e-05 0.0015 20.2 6.4 1 23 1026 1048 1026 1048 0.98

13 20 1.1e-05 0.0015 20.2 6.5 1 23 1054 1076 1054 1076 0.98

14 20 7.5e-06 0.0011 20.6 5.3 1 23 1082 1104 1082 1104 0.97

15 20 2.8e-05 0.0039 18.9 7.1 1 23 1110 1132 1110 1132 0.97

16 20 3.8e-06 0.00055 21.6 6.0 1 23 1138 1160 1138 1160 0.98

17 20 0.00017 0.024 16.4 10.0 1 23 1166 1188 1166 1188 0.97

18 20 4.2e-06 0.0006 21.4 5.2 1 23 1194 1216 1194 1216 0.98

19 20 0.0014 0.2 13.5 0.3 1 23 1223 1245 1223 1245 0.96

20 20 0.04 5.8 8.9 5.5 1 23 1256 1278 1256 1278 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00011	0.015	17.0	1.5	1	23	705	727	705	727	0.96
2	20	0.0073	1.1	11.2	0.7	1	20	733	752	733	755	0.94
3	20	2.8e-05	0.004	18.9	5.4	1	23	774	796	774	796	0.98
4	20	0.00024	0.034	15.9	4.7	1	23	802	824	802	824	0.99
5	20	4.4e-05	0.0064	18.2	5.3	1	23	830	852	830	852	0.97
6	20	1.4e-05	0.002	19.8	7.3	1	23	858	880	858	880	0.97
7	20	9.4e-07	0.00013	23.5	2.9	1	23	886	908	886	908	0.97
8	20	0.00013	0.018	16.8	6.7	1	23	914	936	914	936	0.97
9	20	0.00029	0.042	15.6	5.6	1	23	942	964	942	964	0.97
10	20	6.1e-07	8.8e-05	24.1	1.9	1	23	970	992	970	992	0.98
11	20	1.2e-05	0.0017	20.0	7.7	1	23	998	1020	998	1020	0.98
12	20	1e-05	0.0015	20.2	6.4	1	23	1026	1048	1026	1048	0.98
13	20	1.1e-05	0.0015	20.2	6.5	1	23	1054	1076	1054	1076	0.98
14	20	7.5e-06	0.0011	20.6	5.3	1	23	1082	1104	1082	1104	0.97
15	20	2.8e-05	0.0039	18.9	7.1	1	23	1110	1132	1110	1132	0.97
16	20	3.8e-06	0.00055	21.6	6.0	1	23	1138	1160	1138	1160	0.98
17	20	0.00017	0.024	16.4	10.0	1	23	1166	1188	1166	1188	0.97
18	20	4.2e-06	0.0006	21.4	5.2	1	23	1194	1216	1194	1216	0.98
19	20	0.0014	0.2	13.5	0.3	1	23	1223	1245	1223	1245	0.96
20	20	0.04	5.8	8.9	5.5	1	23	1256	1278	1256	1278	0.99

Sequence Information

Coding Sequence: atgaaTCCTGATCATCACAATATAAACACGGGTGGTGGCCAACCCCCAGGCAATTCTGAGGCTCAGAATCAAAGAGTACAATCGACTCAGCAACAACAGCAGGGCCAAACCAATAATTTAACTCCAACAACATCTGCTACTGACTTGCGAGTGAATTCGGCGGCGGTAAATGTTGCTTTGTCAAGCGTGGCTAAATATTGGGtgtttacaaatttatttcCTGGACCAATACCTCAGGTTTCTGTATATGGTTTACCGACAGGTGCAAGAATTGAAAATGGGAAGCCTGTTCAGGATCTCGGTCAGGCACATGCAAGTCTACTTAATGGAGATCCTAATATAATATTAGGTCATGCAGGACAACAACAAGTTACTGTTTCAGCAGCAGGACAACAAATTCCAGTATCTCAAATTATTGCTAACCAAGCAACACAAGGACATGaGTCGCTGGTGGCGCACACGGACAGCGGCGCGGCGCTGGCGGTGGCGGGCGCGCCGTCCCAGGTACCCAATAATCGGGTCGAGTTTGTACAACATAACATTGATATGGGGCATCACTCTCAACAACATATCATGCAACAGCAGTTGATGGCTGCTGCTCGTCCGGAACATTCTAATCAGCAGATTCAGCTGACGGTCAGCGAGGACGGCATCGTGACAGTGGTGGAGCCGGGCGGCAAGCTGGTGGACAAGGACGAGCTGCACGACTCCATCAAGATGCCGTCCGACAACACGCTCACCGTGCATCAGCTGCAGCAGATTGTTGGCCACCATCAGCCACATATTACTAAACAAAATACAAGGTTTAGGGAAGCTATTTCTAGCAGAGAAAGATTAGCCTTAACTTTGagATTCCTAACTACTGGAGATTGCTATAAGACATTATCGTTTTCATATCGTATAGGAAATTCAACAGTTTCAAAAATAGTGACCGAAGTATGTCAGGAAATATGGAATGTTTTACAACCATTAGCCATTCCACAACCTACACAAGAAATGTGGCTCAATATCGCAGAAGACTTTTTTGGGAAATGGGGATTTCCTCATTGCCTGGGTAGCGTGGATGGAAAGCATATTACCATTAAATGCCCTCCAGATAGCGGCTCAATGTTTTACTGTTACAAAAGTAAATTTTCTATTGTGTTATTGGCTGTTGTAGACGCTAATTACAAATTCATATATGTTGACATTGGATCGTTTGGAAAAGATTCTGATAGTACTATATTTGAAAAAACACCTTTTTTACAACTATTGCGAACTGGTCAACTTAATGTACCAAATGCCCAACCATTACAACAAGGCACAGATCCTTTGCCTTATGTTTTAATAGGGGATGGTGCCTTTAAGCTGGAAACGTTTTTGATGAGACCTTTTGTAAGAGAAGCGGCTATGCAAGATAGAGATAAAAAGAGATTTAATCAGGCGCTCAGTCGAGCACGTGTAGTTGTGGAATGTGCTTTTGGAATAATGGCACAGAAGTTTAGGATTTTCCTAAGACCTTTCGAAACAGATTTGACAAAcacaataaaaattgtaaaagcaGCTTGTTGTTTGCACAACTTTATACAGACGAAAGAGTCAGCCGTACATACCAGTTCCAGCTTTGAAATAGAACAGCTAGGTGCCTTTCTACCACAAAATAGACCTGGCAACCGACAGAGAGCATCGTCGGCAGCGTTTGAGGTGATAGACAGCGTGGTCCGCATCGAGCAGGCGACGGGCGAGCCGGCGAACATCCTCGTGACGCAGAACGCGGACGGGACCACGTCTATCGAGACGAGCGCCGCCGACCCGCTCGTGAAGGACGAGAAGAACGTCGCTAAGATCGAGTCGGCGCAGTTCGCGATACCCGCGGAGATCAAGGACATCAAGGGGATCGACTTGAAGaATGCTATGGAGGGCGCGGTGGTCAAGATATCAACTGGAACAGAACATGATCTTCACGCAATGTATAAAGTCAACGTTGAGGATCTTTCACAACTGCTTGCCTATCATGAAGTCTTTGGAAAACTCAATTCTGAGGGCCAGCCACAAGCAAAGGTGATAAGTGAGGTCGATGTGGAAGCCGGCACAAGCGCCACTATGTCGGAGGCGGAAACTTCGCCCGGACATCATGCATGCGATATATGCGGGAAAATATTTCAGTTCCGCTATCAACTTATCGTTCATAGACGATATCACGGTGAAAGTAAACCATTTACGTGTCAAGTGTGCGGTTCTGCATTCGCAAATCCAGTGGAACTATCGAAACACGGAAAATGTCACCTTGCCGGTGACCCCGCTGAGCGCCAAGCAAAACGGTTAGCGCAAGACAAGCCATATGCCTGCTCCACTTGCCATAAAACATTTTCTAGGAAGGAACATCTTGATAATCATGTCAGGAGTCACACTGGAGAAACGCCGTACAGATGTCAGTTCTGCGCCAAAACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCACACACAAATGACACTCCGTTCAGATGTGATCTGTGCGGCAAGTCCTTTACAAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGTGAAACACCACATCGCTGCGACTTTTGCTCGAAGACATTCACCCGCAAGGAACACTTACTTAACCATGTACGTCAACACACCGGAGAGTCGCCTCACAGATGTAACTTCTGCGCGAAATCTTTTACTCGTCGCGAACATCTCGTGAATCACGTCCGGCAACATACGGGCGAAACTCCATTCCAGTGTGGATACTGTCCGAAAGCTTTTACTAGGAAGGATCATCTTGtgaACCATGTCCGCCAGCACACGGGAGAATCACCCCACAAATGCTCCTACTGCACTAAGTCGTTCACACGCAAGGAACATCTGACCAACCACGTGCGTCAACACACAGGCGAGTCCCCTCACCGCTGTTCGTACTGCGCCAAGTCCTTCACCAGGAAAGAACATCTTACTAATCACATAAGACAGCATACGGGGGAGACTCCTCACAAGTGCACGTATTGCTCTCGCGCCTTCACGCGGAAGGAACATCTCAACCAACACATCAGACAACATACCGGAGACATGCCACATACCTGTGCATATTGTAACAAGAGTTTCACAAGGAAAGAACATCTTATCAATCATGTGCGACAACATACTGGGGAGACGCCATTCAAGTGCACCTACTGTTCGAAGTCTTTTTCCCGCAAGGAGCATCTCACAAATCATGTGCATCTTCACACGGGCGAAACGCCGCATAAGTGTCCTTTTTGCACTAAGACCTTTTCAAGGAAAGAACATTTGACCAATCATGTTAGAATACACACCGGTGAGTCGCCGCACAGATGTGAATTTTGCCACAAAACATTTACTCGCAAAGAGCATCTTACGAATCATCTTAAGCAACACACAGGCAATACACCACATACTTGCAAAGTGTGCTCTAAACCATTTACAAGAAAGGAACATCTCGTTACACATATGagGTCGCATAGTTGTGGAGAGCGGCCTTTTAGTTGCGCCGAATGTGGCAAGTCATTCCCATTAAAAGGAAATTTACTCTTCCATGAGCGATCACATAATAAGGGCGCGAATTCTACAAATAAGTCATTCCGGTGTGATATCTGCTCGAAGGAATTTATGTGTAAAGgtcaTCTAGTATCGCACAAACGAACCCATACTGATGCAGTTGAAAATGAAGCTAGCACAGAAACGGCGGCCGAAGGTGAAGATTGTGGGGACTGCATTAAATGTGAAAAAGATGTGCCCGAGAGGCCTGAGAGAAAACATGACACAAgAGCATCATCAGAGAGTAGACTTTCTGATCCACTTACAGCACAAACTCAGACACCTACCTCAGCCGTCATGCAAATATCTAGCCAGCAAGTTCGAACTGGCACTGAAACTAGTTCAGCAAGTGTGTCTGCTGGCACTTTCACACATACAGCAAACACCCAACACCACACCGGTACAACAATAGCCCATCATCCAGTTACTGTGAATTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGNSEAQNQRVQSTQQQQQGQTNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQAHASLLNGDPNIILGHAGQQQVTVSAAGQQIPVSQIIANQATQGHESLVAHTDSGAALAVAGAPSQVPNNRVEFVQHNIDMGHHSQQHIMQQQLMAAARPEHSNQQIQLTVSEDGIVTVVEPGGKLVDKDELHDSIKMPSDNTLTVHQLQQIVGHHQPHITKQNTRFREAISSRERLALTLRFLTTGDCYKTLSFSYRIGNSTVSKIVTEVCQEIWNVLQPLAIPQPTQEMWLNIAEDFFGKWGFPHCLGSVDGKHITIKCPPDSGSMFYCYKSKFSIVLLAVVDANYKFIYVDIGSFGKDSDSTIFEKTPFLQLLRTGQLNVPNAQPLQQGTDPLPYVLIGDGAFKLETFLMRPFVREAAMQDRDKKRFNQALSRARVVVECAFGIMAQKFRIFLRPFETDLTNTIKIVKAACCLHNFIQTKESAVHTSSSFEIEQLGAFLPQNRPGNRQRASSAAFEVIDSVVRIEQATGEPANILVTQNADGTTSIETSAADPLVKDEKNVAKIESAQFAIPAEIKDIKGIDLKNAMEGAVVKISTGTEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQAKVISEVDVEAGTSATMSEAETSPGHHACDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTYCSRAFTRKEHLNQHIRQHTGDMPHTCAYCNKSFTRKEHLINHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGNTPHTCKVCSKPFTRKEHLVTHMRSHSCGERPFSCAECGKSFPLKGNLLFHERSHNKGANSTNKSFRCDICSKEFMCKGHLVSHKRTHTDAVENEASTETAAEGEDCGDCIKCEKDVPERPERKHDTRASSESRLSDPLTAQTQTPTSAVMQISSQQVRTGTETSSASVSAGTFTHTANTQHHTGTTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -