Eedi025901.1
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- -
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000019.1:9330432-9331190[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-08 4.1e-05 24.5 0.0 2 40 20 59 19 62 0.92
Sequence Information
- Coding Sequence
- ATGAGACAAAGAAAGTGTAGACGTGAAATAGGGTCCCGagcatataaaaattacttagaAGACATGTTAAAACTTGCATGCGAAGCGGTTGCATCCAAACAAATATCTTCAAGAGATGCTGAACGACAATTCGGTATTCCACGACGaactattgtaaataaaatgaaaaacttGCATTCGAATTCTGTTGGTCATCCTACGATTTTGACAagtgaagaagaaaaaaaatttgtgagAGTCTTGCAAGCTTTTAGTGACTTTGGTTCTCCGCTAACTAAGCTTGATCTAAAGTTATTGGTGCATgaatatttaaggaaaaattCTCGAGATCTTTTGTTCAAGAATAAAATTCCGGGTGATGTATGGGTGCAGGGATTTTTGGCTAGACATGCAGATAAACTAAGTGTAAGAACCacacaaaatatttcaaaagcgAGAGCTGAAAAGGGACCTCAACAAATAGCTAACTATTTTGAGAATTTAAGTATTACTTTGAAAGACATCCCAGCAACAAATGTAGTTAACTTTGACGAGACTAATCTCTCGGACGATCCTGGATCTTCCAAATGCATTTTTCGTCGCGGGGTAAGATATCCAGTAAGGACAGCTAATTCGACCAAAGGAAACATATCTATTATGATCACAGCAGTTGCGAGTGGTCAATGCTTGCCTTTATATGTTGTCTATAAAGCAACAATGGATTACTGGAGGACCACCTGGTACCAGATACAACTGCACGAAATCATGATGGTTCGATAA
- Protein Sequence
- MRQRKCRREIGSRAYKNYLEDMLKLACEAVASKQISSRDAERQFGIPRRTIVNKMKNLHSNSVGHPTILTSEEEKKFVRVLQAFSDFGSPLTKLDLKLLVHEYLRKNSRDLLFKNKIPGDVWVQGFLARHADKLSVRTTQNISKARAEKGPQQIANYFENLSITLKDIPATNVVNFDETNLSDDPGSSKCIFRRGVRYPVRTANSTKGNISIMITAVASGQCLPLYVVYKATMDYWRTTWYQIQLHEIMMVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -