Eedi024860.1
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- -
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000018.1:15895129-15896134[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 1.4e-07 32.4 0.0 2 37 12 47 11 53 0.93
Sequence Information
- Coding Sequence
- ATGGCTAAACGTGGCGAATATTATGCGTGGAATGAAGAAAGCATGAAACTGGCATTACAAGCTTTACGCAAACAAGAAGTTGGCCTAAATGAAGCAAGCAGGATATATGGAGTACCAAAGGCAACACTAAAGCGAAGATTTGACGATAAAAATGTAAAAGCGAAAGAGGAAAAGCAAATAGTCGGTTCTACTGGTGATCTTACTCCTGAATTGGAAGAAAAATTTGTCAATCATATTTTGGAATTGGAACGCTGTTTATACGGAATCACACCAAAAGATGTTAGAAGTTTAGCTTACAAAATAGCTGAGCAAAAAGGATTAAAGCAcagatttaacaaaaaaaaggaaatggcGGGAAAAAAGTGGTACTACGGGTTTTTGAAACGGCACCCTGAATTAAGTCTAAGACAACCTAGGGCAACTTCTTTTAACAGAGCTACGGCTTTTAACAAGCCAGTAGTGAAAGATTTCTTTGAGAAGTTAGAAAAGGTTATGAACGAGAATGGCATCAATGATCCGAGATACATTTTTAATGTCGATGAGACAGGCCTCACAACTGTTCAAAGAAAGCCAAGAAAAATCCTGGCGCAGAAAGGTAAGCACCAAGTAGGGGCCATAACTAGCGGAGAACGTGGCACCACTACAACAGCTGTTTGTTGTGCAAGCGCCGCAGGATATTTTATCCCGCCGCTTATAATTTTCAAACGTAAACGAGCCAAGGATGAACTTAAAGATGGTGCGTCACCTGGCGCAATTTTCGCATTCAATCCCGAAAGTGGTTAcataaacaaagaaatattcTTCGTTTGGATGCAACATTTTGTTGAAAGTGTCAAACCAACACCTGAAAAGAAGCTCACACTTCGAATAAACTACAGCCACTGGATACTTCATTTTTTAGACCTTTGA
- Protein Sequence
- MAKRGEYYAWNEESMKLALQALRKQEVGLNEASRIYGVPKATLKRRFDDKNVKAKEEKQIVGSTGDLTPELEEKFVNHILELERCLYGITPKDVRSLAYKIAEQKGLKHRFNKKKEMAGKKWYYGFLKRHPELSLRQPRATSFNRATAFNKPVVKDFFEKLEKVMNENGINDPRYIFNVDETGLTTVQRKPRKILAQKGKHQVGAITSGERGTTTTAVCCASAAGYFIPPLIIFKRKRAKDELKDGASPGAIFAFNPESGYINKEIFFVWMQHFVESVKPTPEKKLTLRINYSHWILHFLDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695427; iTF_00985021; iTF_00281128; iTF_01491858; iTF_01491862; iTF_01154974; iTF_01158658;
- 90% Identity
- iTF_00695427;
- 80% Identity
- -