Eedi026854.1
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- -
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000020.1:4324807-4326747[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-14 6.1e-12 46.4 0.0 1 41 15 55 15 56 0.96
Sequence Information
- Coding Sequence
- ATGCCAAATAAATATCATCGGACGTCTCAGCAGCAGACATGGGACCCAGATGCGATGGAAGCAGCTATAAGAGCTGTAAGAAACGAAGAAATGGGTTTCCTTAAAgccagtaaaatatttaaagttccTCGATCGACACTCAAACGACGGGTAAAAGGAAAAAACCGAGATGcggtagaaaatataaaaattttggggTCGCGACGTCCAATTTTCAATTCAGAACAAGAACAACAATTGGTTCAACACATTTTAGAGCTTGAAAAGAGGTTTTATGGATTAACTTTGCAGGATGTAAGGAAATTAGCTTTTCAGTtagctgaaaaaaataatataaaacacaattttaacagaaatattaaaatggCTGGAAAAGCATGGACGGCTTCTTTCAGAAAACGTCATCCGGAATTAACATTGCGGAGTCCAGAAGCAACCTCTGTTGCTCGAGCACAAGGTTTTAATAAAGTAagtgttatgaaattttttgacCTTCTGGAAGAGGTTAGATCTAAGACAAATTATCCCCCTCATCGAATTTTTAATGTCGATGAATCTGGCTTCACGACAGTCCAGAGTAAAAGCTCAAAAATTCTTGCAAAAAAGGGTAAGAAACAGGTAGGTGCCATCACCTCAGCAGAAAGGGGTGTACTGAGCACTGTCGTTATTTGTATGGCTGCTGGTGGAAACTTCATTCccccatttattatttttcctcGACAGAGAATGAAGGTGGAACTACAAGATGGGGCACCACCAGGAACAGGATTTGCTTGTCACTCGTCAGGTTGGATGCAATTGGACATTTTTACGGACTGGTTTAAGCATTTCCTTAAATTTGCCAAGCCGACTGCAGACGATCCAGCTCTTCTGATTCTAGACGGACATAACACGCATACAAAAAATTTGGATTTCATCGATTTGGCAAGACAAAATCACACAACTGTGTTATGTTTGCCCCCACACTGCAGTCACAGACTCCAACCTCTAGACGTGTCTTTCATGGGGCCagttaataagtattatatccGTGCAGTTGAGAAATATCTTCGTAATAATCCAGGAAGAGCAATAACTGTCTTCCAGTTTAGCAAACTCTTCGGTGAAGCTTACAGCGAGGCAGCACAACAGTCTATTGCAGTTAGTGGATTTCGCAAATGTGGAATAGAACCATTAGACCGACATGTTTTTAAGGATCATGATTTCCTGCCTGCAGACACAACAGATGTCACTCTTGTTGAACCGGAAGTACAACAAAATGAGTACAACAAAGAGAATGTCACACCTGAGAGAGAAGAGTCTTCATCACTTTTGGACACCGTAGAGGAAACATTAGTAGCTACGCCGCCAATGTTCGATTTGCAAGAAGATAAAACCTTGGAAGAAACGCAAGCAGTTACACCGCCAATCTTAGATCCACTGGTAAACACAGTTCTGCACGAAATACCCGTAACGGCCTCACCAATGCTAAGCCAGCATGCAGGGATATTACCATCGCAAATTTTGAATCCACAACCGAGCACATCATGGGCAATAACACCTAAAGACGTATTTCCGATTCCCAAAGCATTGcctaaaaccaaaaaaataatcagAAAGAGGGGCCGTACAGTAATTTTAACTAGTAGTCCATATAAAAAAGAGTTGCAAGAAGAAAAACTAAGGCAAGAAGAAAGAAAAGCACCAAAAAGATCgcccaaaaataataaaattaataaaactaccAAACAATCTAAAACTAAAATTCAGAAAAGTGTCATCAatgctgatgatgatgatgatgtagatGACCCTGAATGCTTTTACTGTAGTGAAGTTTGGTCTAAGTCAAGACACGAAGATGGTTGGATACAGTGCTCTCTTTGTAAACGATGGGCTCATGAAGCATGTTCGGGATGTGATGACGAAGACGATGTTTTTCTTTGCGAATTTTGTTCATAA
- Protein Sequence
- MPNKYHRTSQQQTWDPDAMEAAIRAVRNEEMGFLKASKIFKVPRSTLKRRVKGKNRDAVENIKILGSRRPIFNSEQEQQLVQHILELEKRFYGLTLQDVRKLAFQLAEKNNIKHNFNRNIKMAGKAWTASFRKRHPELTLRSPEATSVARAQGFNKVSVMKFFDLLEEVRSKTNYPPHRIFNVDESGFTTVQSKSSKILAKKGKKQVGAITSAERGVLSTVVICMAAGGNFIPPFIIFPRQRMKVELQDGAPPGTGFACHSSGWMQLDIFTDWFKHFLKFAKPTADDPALLILDGHNTHTKNLDFIDLARQNHTTVLCLPPHCSHRLQPLDVSFMGPVNKYYIRAVEKYLRNNPGRAITVFQFSKLFGEAYSEAAQQSIAVSGFRKCGIEPLDRHVFKDHDFLPADTTDVTLVEPEVQQNEYNKENVTPEREESSSLLDTVEETLVATPPMFDLQEDKTLEETQAVTPPILDPLVNTVLHEIPVTASPMLSQHAGILPSQILNPQPSTSWAITPKDVFPIPKALPKTKKIIRKRGRTVILTSSPYKKELQEEKLRQEERKAPKRSPKNNKINKTTKQSKTKIQKSVINADDDDDVDDPECFYCSEVWSKSRHEDGWIQCSLCKRWAHEACSGCDDEDDVFLCEFCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695402;
- 90% Identity
- iTF_00695402;
- 80% Identity
- -