Eedi021795.2
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- retn
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000016.1:12840746-12849062[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-20 3.7e-16 60.6 0.0 16 89 24 95 12 95 0.94
Sequence Information
- Coding Sequence
- ATGCTTCATTTGCTCCAATTTCGGCGCATCATTTTGTACTTTAACATAAGCACAGCAATTAATCTCTTAACGGGCACGCCAATCAATAGACTACCAATTATGGCAAAATCAGTGCTCGATCTTTACGAGCTGTACAACCTAGTTATAGCTCGCGGTGGTCTCGTAGAGGTCATTAACAAGAAATTGTGGCAGGAAATCATAAAGGGCCTGCGTTTACCTTCCTCTATCACATCGGCTGCATTCACACTAAGGACACAGTACATGAAATATCTGTACGATTACGAGTGTGAAAAGAATAACATATCCACTCGAGCCGAATTGGATGCTGCTATTGAGAGCAACAAACGTGAGGGACGCCGTTCGTCTGGGCCATTTGAAGCATCGACCTCAGCGATGGCATTGATGGGCAGACCACAAGCTGTACCACTACCTATGGACCAGATGCCTCTCCAATTTCAACCGTATGCCATGCCATCTATTGCTGGGGTCACTGGTCAGCATATGCCGCAGCCCAACCAGTCTCAATTAACGGATATGATTCGACGTTATCAGTTTGAAGCCCTTAGAAGCGCCACAGGTATCGCAAATCAATTACAAGAACACGAAGCGGAATCTCCATCGTCGACTTCGATAGTGTCACCAAGCCAAGCCCTCGCCGTCGCTCTGAACGCCATTGAATCGGGGTCTTTTTTCAATTTCATCCACCATCGATACAACAGAACTAGCGTAGATCTCGAACCACAGCGAGAGGCTCTGAACCTCAGCGAGAGCCCCGTCTCGACAGGGTCGGGTGCTCGCAGGCGCTCCCGCTCGCCTGCCGCCGCTGACACACCGCCACCGACGGCGAAGCGCTCGCGGACTGAAGCCACCGGCGCCGTGGCCGGCCCCGTGGCTGGGCCCTCGTCCGCCCCCGTGGCCGGCCCCTCGTCCGCCCCTGTGGCCGGCCCCTCGTCCGCCCCCGTGGCCGGCCCCTCGTCCGCCCCCCACCGTGCCGTGATCAACTCATCGGAAAATCCAAATGATACGGAAGAGTCGGATGCCTCCCCGCCTAACAGATTTTTGGTTGCCAATGGATATGAAGGGAGACGTATCTCCTTCAGCCTCAACGATGATGCCACCAATTCAGAAGTTTCGGTGTCTTTAAGAATCAACGGAGTTACATTCAACGGTACCCTCAGCCGATCGCCGAAAGGACCAAACGGTCTCCGACAAGAAAGACCTTAA
- Protein Sequence
- MLHLLQFRRIILYFNISTAINLLTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKNNISTRAELDAAIESNKREGRRSSGPFEASTSAMALMGRPQAVPLPMDQMPLQFQPYAMPSIAGVTGQHMPQPNQSQLTDMIRRYQFEALRSATGIANQLQEHEAESPSSTSIVSPSQALAVALNAIESGSFFNFIHHRYNRTSVDLEPQREALNLSESPVSTGSGARRRSRSPAAADTPPPTAKRSRTEATGAVAGPVAGPSSAPVAGPSSAPVAGPSSAPVAGPSSAPHRAVINSSENPNDTEESDASPPNRFLVANGYEGRRISFSLNDDATNSEVSVSLRINGVTFNGTLSRSPKGPNGLRQERP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -