Basic Information

Insect: Eupeodes luniger
Gene Symbol: L_1
Assembly: GCA_951509635.1
Location: OX608073.1:57147658-57161188[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.6e-06 0.0011 20.8 1.7 1 23 209 231 209 231 0.98

2 15 0.47 94 5.3 5.8 1 23 237 259 237 259 0.98

3 15 2.4e-07 4.9e-05 25.1 3.1 1 23 265 287 265 287 0.99

4 15 1.1e-05 0.0022 19.8 0.3 1 23 293 315 293 315 0.98

5 15 0.0038 0.76 11.9 0.4 2 23 419 441 418 441 0.97

6 15 0.054 11 8.3 1.3 1 23 522 544 522 544 0.97

7 15 0.00042 0.084 14.9 1.1 2 23 552 573 551 573 0.95

8 15 0.00035 0.069 15.2 0.9 1 23 581 606 581 606 0.89

9 15 0.0015 0.29 13.2 2.9 1 23 698 720 698 721 0.96

10 15 0.0011 0.21 13.6 4.6 2 23 909 931 908 931 0.96

11 15 0.12 25 7.1 0.1 1 23 937 959 937 959 0.92

12 15 3.8 7.7e+02 2.4 0.3 2 23 967 988 967 988 0.92

13 15 5.1 1e+03 2.0 0.6 2 23 1078 1099 1078 1099 0.92

14 15 0.0089 1.8 10.7 0.0 1 23 1109 1131 1109 1131 0.96

15 15 2.3 4.6e+02 3.1 1.2 1 23 1138 1160 1138 1160 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.6e-06	0.0011	20.8	1.7	1	23	209	231	209	231	0.98
2	15	0.47	94	5.3	5.8	1	23	237	259	237	259	0.98
3	15	2.4e-07	4.9e-05	25.1	3.1	1	23	265	287	265	287	0.99
4	15	1.1e-05	0.0022	19.8	0.3	1	23	293	315	293	315	0.98
5	15	0.0038	0.76	11.9	0.4	2	23	419	441	418	441	0.97
6	15	0.054	11	8.3	1.3	1	23	522	544	522	544	0.97
7	15	0.00042	0.084	14.9	1.1	2	23	552	573	551	573	0.95
8	15	0.00035	0.069	15.2	0.9	1	23	581	606	581	606	0.89
9	15	0.0015	0.29	13.2	2.9	1	23	698	720	698	721	0.96
10	15	0.0011	0.21	13.6	4.6	2	23	909	931	908	931	0.96
11	15	0.12	25	7.1	0.1	1	23	937	959	937	959	0.92
12	15	3.8	7.7e+02	2.4	0.3	2	23	967	988	967	988	0.92
13	15	5.1	1e+03	2.0	0.6	2	23	1078	1099	1078	1099	0.92
14	15	0.0089	1.8	10.7	0.0	1	23	1109	1131	1109	1131	0.96
15	15	2.3	4.6e+02	3.1	1.2	1	23	1138	1160	1138	1160	0.92

Sequence Information

Coding Sequence: ATGTCGGATGGGACAATTACACCGAACTCgctgcatcatcatcatcttcatcatcaccatcatcatcatcaacagcaAAGGCTGCATCATCACTTGCAGCAGCAGCAATACCAATGCGAACAGCAGCAACAGAACAGCGGCAACGGCAATGGTCACAACCGCGACAGGCATCACAATCGACGTGTTTCAGCCTTAAATGGAGCAACTGCTACTGGTGGTGTCACTGGCGGCGGTGAGGACGACGATGAGAATGATGAAGACGACGATGAGGCTCGTGACGGGGATGCAGACGAAGATGACGACGCCGCAAATTCTAGCGAGGAAAGGGTTTTCCTTACGTCaaatggtggtggtggtgccAATGATGCTGTTGGAACAAACACcacaaccaccaccaccaccaccaacatTAATTCCACCACCTCGAACAGCATCAGTGGCTCAAATAGCGGCAATGGCAATTTTAATGGTaacagcggcggcggcggtagcGGTAGCGGTGGCGGTGACAAACATTCCGTGAAAATACCAACGAAATTGCGGAAAATCGATAGGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGATGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGGTATCTCAAGAAGCATGAACAGAGTCATGCCGAGCACCTTCCATTCAAATGCGACTACTGTGCAAGACTTTTCAAACACAAACGGTCTCGTGACCGACACACAAAGTTGCATACTGGAGATAGACGATACAGGTGTCCACATTGTGAGGCGGCATTTTCAAGGAGtgATCATCTGAAGATCCACATGAAAACCCATGACAACCAGAAGCCCTTCCAATGCACCATCTGCAATCGAGGCTATAACACAGCTGCAGCCCTGACATCGCACATGCAGAATCACAAGAAACAAGCAGCGATTTTGGCTGCTGGAGGTAATCCCGCTGCCCTCAACTACAGCCCTCGTTCCACTGGTTCCGGTTCGAGTAATGGAAGTTTGCAAAAACGTCGTTACACATCGATTGCCAACACTAAGAGTCCATCTCCCAGTACATTGGAATATGCCAAGCGTATGAGGAGTTCCTACGTCACGTGCATGTATTGCGCCAAGTCCGACTTTGCATCAATGGAACAGCTGAGTAGTCATATTCAAGCAATGCACGAGAAGGAGGCATTGGCTAATCAATCTGTTGCATCGAGTGGTTTTCAAATGTCCTGCGAGTACTGCACCATGAAGTTTCCCAGTGTTCCGGCAATGTTCCAGCACATGCGGACGACACACATTGATCGGCTATCGAGTCCGAGTAGCTATTTTGAGCATTTCAATCGGCTGGCTGCAACGGGAACTTTCAGTCCACGACTGCCGACGCCCAAGTCAAATGAGACAAAGGTGAAAGTTGAGGAGCCAAGTCCTAAGGCTGAGGAGAAAACCGACGATGAACCAACTGATTTGAGCCAAAATAGGCGATCTGTTCAGACTCCGTCGCAAGAGTCTGTCGAAGCTAACGATCGACCGGGGGTGTTCTTTTGCAACCAGTGTAGCGATGGTTTTCCCGATTTCGACAGTTTCCGCAATcatcttaaatcgcacatcgtcCAGGGGCTCAGTTTGGTGTGTCATCACTGTGGTCAGACTCTGAGGGATCAGCCAGAGTACGAGAGGCACATTGTTTCGCATTTTCTTATCACTTGTTCTGAATACGCCTGCACCGAGAAGAACTGTAGTAAGACTTTCTCTAAGCCGGATGAGCTCCAAAAGCATCTCTTTGACAATCATATTCAGACGTTGTTCAAGTGTTTGTTGTGTTCGGACCTCTTCGAAACTAAGGTTGCGGTACAAGTTCACTTCGCATGCATTCACTCACCGGAGAAGAAGATTTACCGCTGTTCAGCCTGCATGGACACCTTCCACGGTGAACAGGAGTTTCATATTCACGTGAAAACCCGTCACCAGACAATAGTTGGATCACCGATACAGTGCATGTTCTGCCGAGCTGTTTGTTCCACCGAGCTTGAGATGCACTTTCATCTTGCTGCCCATGCCCGCCAGTTTCGTTGTCCATCGTGTCCGGAGACTTTCCACGTTGAATTCCTTCTCGATCGACATATGCAAACACACCATCATGGACAGAAGGAAGTTGAATCCACCCCTCCTCCTCCTCAGACGGTCAATCCATCACCAGTGAACTCGATCAATCCACTATATATGAGTGCTCTCTTCAACAAACCTCCTCCATCAaaccaaaacaacaataacagtATTCTGGACTACAACGCCTTTGCCATGGGCAAGAACCTCTTCGGCAACGCCTCAGGGAACAAATTTTACAATCCTCTTCAAGTCGACACTGGGTCGGCCATGAAGCATCCATCACTTGTATATGCAAGCTTGAATCAACGCTACTTTGACACCAATCGAACTATTCTTGAGATGTACAACCAACATCAGCAGGACAAACTCGCAGCTGGACCGGTCGCTAGCATGTTCACTAGtcccagcaacaacaacaacaacagaatcGCACCAAAACTCCCACAAGAGTCCAACAAGCCGTCAGATCGAGGAATTGCTGCCGGAGGTGGGTTCAGCTGTGGAATGTGTGAACGCAACGATTTCCGCACTGAAGCCGAAATTCACTCACATCGCAAGATCGTGCATAACCTCAAGACCGGGGTGAGTCTTCGCTGTGCTTACTGCAGTGGAAACTTTAAGTCACGCAGTGAGCTCGAACACCACATGAAGACGTGTCACAACTCAACCGGCAAGCACAAGTGTTTGATCTGCGATGAGATCTTCCCATCGCCAGCAATACTCGCCGAGCACAAGTTACAACACTCAAAGGTTGGGCAGTCGGGAAAATGTTCCCACTGTGCCAAGGCCCTGCCCGATGTCATGGCTTTTAAGGGACATCTACTGGACCACAACACCGAGGGGCAGATGCCAGTTCAGTGCATTTGCTGTCGCCAAACTCTGCACTCAGATTTTGAGATCGGTCTTCATGCCAAATTCCACACTAAGTCATCGTCGGTTGCCGAGAGCGTTTGTGCCCTGTGCTTGGAAACAATACCCAACACTATGGACGCCAAGGTCTGCGACAAATGCTGTCGCAAGCACAACCTCAACAACAAGTATTCCAACCAGCGCAACAGCTTCGATGGCAATTCGGGACAACCAAGTTACGTGGAGAACCGTTGTAATCTTTGCAACGTCATCATGCCCCACTCCCAGAAACTCCAAGAGCACTTGGTCGAGCACACTTTTGCCGGCTGCGAGGACAGAGGTTTCTCATGCTACATCTGCTCGGCAGTCTTCACAGCTCCAGCTGGTCTCCTCACCCACATGACCGAGCACGGAGCGAATTCACGTCCCTACGACTGCAATCTTTGCAGTGACAAGTTCTACTTCCGCGCCGAACTGGATCACCATTTGGTCGATCATGAGACCCGAGATCGATCAAAGACCTCCCATCCCAGAGATGCAAGCCCTGTGACCGATGACAACAAGGCAGCATTCACCGGTGGTGGCGAACTGCTGACCCCAGCGCCAGAAGTAGAATCCAAGAAGCTCGAGCTTAAAAATGAAGTCCTTGACGAGAAGCCAGCCGAGGAGGACGACGACGAATACATCGAAGTTGAGAAAGTTCCCGAGACTCTCATATCGCAGGAGAAACCGTCACGCCCTTCGCACGACAAGGATGACTAG
Protein Sequence: MSDGTITPNSLHHHHLHHHHHHHQQQRLHHHLQQQQYQCEQQQQNSGNGNGHNRDRHHNRRVSALNGATATGGVTGGGEDDDENDEDDDEARDGDADEDDDAANSSEERVFLTSNGGGGANDAVGTNTTTTTTTTNINSTTSNSISGSNSGNGNFNGNSGGGGSGSGGGDKHSVKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPAALNYSPRSTGSGSSNGSLQKRRYTSIANTKSPSPSTLEYAKRMRSSYVTCMYCAKSDFASMEQLSSHIQAMHEKEALANQSVASSGFQMSCEYCTMKFPSVPAMFQHMRTTHIDRLSSPSSYFEHFNRLAATGTFSPRLPTPKSNETKVKVEEPSPKAEEKTDDEPTDLSQNRRSVQTPSQESVEANDRPGVFFCNQCSDGFPDFDSFRNHLKSHIVQGLSLVCHHCGQTLRDQPEYERHIVSHFLITCSEYACTEKNCSKTFSKPDELQKHLFDNHIQTLFKCLLCSDLFETKVAVQVHFACIHSPEKKIYRCSACMDTFHGEQEFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHHGQKEVESTPPPPQTVNPSPVNSINPLYMSALFNKPPPSNQNNNNSILDYNAFAMGKNLFGNASGNKFYNPLQVDTGSAMKHPSLVYASLNQRYFDTNRTILEMYNQHQQDKLAAGPVASMFTSPSNNNNNRIAPKLPQESNKPSDRGIAAGGGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKALPDVMAFKGHLLDHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHTKSSSVAESVCALCLETIPNTMDAKVCDKCCRKHNLNNKYSNQRNSFDGNSGQPSYVENRCNLCNVIMPHSQKLQEHLVEHTFAGCEDRGFSCYICSAVFTAPAGLLTHMTEHGANSRPYDCNLCSDKFYFRAELDHHLVDHETRDRSKTSHPRDASPVTDDNKAAFTGGGELLTPAPEVESKKLELKNEVLDEKPAEEDDDEYIEVEKVPETLISQEKPSRPSHDKDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542500;
90% Identity: iTF_00427670;
80% Identity: -