Basic Information

Gene Symbol
Zbtb41_1
Assembly
GCA_951509635.1
Location
OX608074.1:142913183-142916777[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 2.4e-08 4.7e-06 28.3 0.8 1 23 177 200 177 200 0.98
2 8 0.00033 0.066 15.2 0.2 2 23 359 380 358 380 0.97
3 8 0.019 3.7 9.7 1.9 1 23 384 407 384 407 0.97
4 8 0.003 0.6 12.2 1.1 1 23 418 440 418 440 0.98
5 8 0.54 1.1e+02 5.1 2.8 1 23 462 484 462 486 0.88
6 8 0.00012 0.024 16.6 0.3 1 23 490 512 490 512 0.99
7 8 0.00016 0.031 16.2 6.2 1 23 517 539 517 539 0.98
8 8 0.064 13 8.0 6.5 1 23 545 568 545 568 0.97

Sequence Information

Coding Sequence
ATGACTGAAGTTCGTTGCAATAACTGCGATGAGCTAAACGATTTTAACGCTGTTAAATGCGAAACTTGTAAAATAAGCCTTAAATTCACTGAACCTTTAGATTCCGAAGAAGATGAATGCGAAAGTGATTTTCGTTTCATCGAAGAAGCTGAACTAATTGGTGAAGTATACAAATTGGAAAATCTAGAGGATCTGGAAGAGGACAGCCATGGACAATGCATAAAACCTGAACCAGGTTTTGATGCAAATATTTGTTGTCAAATTCCCAATGCTTATGTAGAGAGCATTGTTAAATTGGAGGACGATGGCACTGAGAATGTTACATTTGAAATTGTTACTGTCGAACCCAATTTGAATGTTGACATTGAAAATGAGCAACAGTTTCAAGAAACACACAACTTAGACGTCAATGATAATGCAACGGAGAAGAGTAGAatttcaaatataaaagtcAACAGACCAGACaacttaaaaaagataaaatcttTACCCACAGAAGAAAGCCCAACAACCACTCCAAGCATACCATACCAGTGCACAGAATGCCCAAAAAGttttaagaGAAAAGCAACTCTCAAGGCGCATATTAACCGAATACACAATCCAGATGATGAGAGTGCCTGCTGTGCTGGCCATGGACATGCATCTGGGATTGAATCCAAAAAACTTGTTCATCATCACGACACACATGCTACACCTGCATTCTCCGAGTCCGGTGAATCTGAATACTTATATTCAGGAGATGAAGAAAGTGAAAAGCCTTCAATTCCTCTAACACACTCAAACAACTCTCCCGCCggcaaaagaaaacgaaaacttAAACAAGAATTTGATTCGGAAAATAATAATACGAGAAAAAAGTCTCCAAAAAAGTGCAAAATCGAGTTGAGTCCTTGTTCGAACTCACAACTAAATAAATCCAATGAAATTGTCTACAAATGTGCAGCGTGTGAGAAAATCACAGATAGCTACCAGGAGCACTTGAAGCACATAGTAATTCATGAGAAAGTAGATGACAGTCTTACGGTCACGACTTCTCTCGAACAACTCAAAAAAACACCGAGTGGATTTTTGGAATGCAAAGAATGCGGTGGGGTATTCATGAGTGAGCGGGAGTTCAACATTCACCAGAGGTCCCATGAGGGAGTTCATCAGTGTGACATTTGTAAGACGATTCTTTTGACCCCGTCGAGTCTCAGAAAGCATAAAAATCGGATGCATCGTCAAAGGTCAAGCAGGAAGGGAACATTATTCGAGTGCAATATTTGTAATGAAAAATATGAATCTCAGTTGCTCATGTTGCAGCATAGGAAAAAACACACCGAGGTAATGAAGAAAATCGAAGAGATGACCATCATCGACCGAAGTGGAGGAAAAACCTGCTACGTGTGTAAAATATGtgcaaaaacttcaaataaCAAATTCCGGCACGAAGAGCACTTGAGAATTCACACAAAGGAGAAACCGTACAAATGCGAGAAGTGTGGAATAGGAATCGCCACCTCGAATGCAATGGCCCATCACATGCGGACTCATGAGAATATAACGTTCGAATGTAATGTGTGCCATGCAACGTATCGGCACAAGAAAAGCTTGAAAAAACACTTGAAACTTCACACCGGGGAGAGGCCTTTCGAGTGTCGTCATTGTGATAAAAAGTTTGCCTTCAATTACACACGAGCCGATCATGAGCGGAAGTGTCACATAGATGGTGGCACGTCTCGCATTCAGAAACGGAATCGCAAAAAGAAGGCAGCAAAGACGGCAGCTGAGAGAGAAAATGAACAGCAGAGAAATTCACCACAAAATGACGAACAACAAAGGGAAGTggtaataaatgaaaatgacaaaGAGAAAGAACTTTCGACGAATGTGGATCCGGAGGAAGTTGGTATAGTATAG
Protein Sequence
MTEVRCNNCDELNDFNAVKCETCKISLKFTEPLDSEEDECESDFRFIEEAELIGEVYKLENLEDLEEDSHGQCIKPEPGFDANICCQIPNAYVESIVKLEDDGTENVTFEIVTVEPNLNVDIENEQQFQETHNLDVNDNATEKSRISNIKVNRPDNLKKIKSLPTEESPTTTPSIPYQCTECPKSFKRKATLKAHINRIHNPDDESACCAGHGHASGIESKKLVHHHDTHATPAFSESGESEYLYSGDEESEKPSIPLTHSNNSPAGKRKRKLKQEFDSENNNTRKKSPKKCKIELSPCSNSQLNKSNEIVYKCAACEKITDSYQEHLKHIVIHEKVDDSLTVTTSLEQLKKTPSGFLECKECGGVFMSEREFNIHQRSHEGVHQCDICKTILLTPSSLRKHKNRMHRQRSSRKGTLFECNICNEKYESQLLMLQHRKKHTEVMKKIEEMTIIDRSGGKTCYVCKICAKTSNNKFRHEEHLRIHTKEKPYKCEKCGIGIATSNAMAHHMRTHENITFECNVCHATYRHKKSLKKHLKLHTGERPFECRHCDKKFAFNYTRADHERKCHIDGGTSRIQKRNRKKKAAKTAAERENEQQRNSPQNDEQQREVVINENDKEKELSTNVDPEEVGIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00694151;
80% Identity
-