Basic Information

Insect: Eupeodes luniger
Gene Symbol: ci
Assembly: GCA_951509635.1
Location: OX608076.1:14251228-14260599[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00023 0.047 15.7 0.5 3 23 342 365 340 365 0.94

2 5 0.091 18 7.5 0.2 1 23 373 400 373 400 0.84

3 5 0.017 3.5 9.8 5.0 1 23 406 430 406 430 0.97

4 5 0.00029 0.058 15.4 0.4 1 23 436 461 436 461 0.97

5 5 1.2e-05 0.0024 19.8 0.3 1 23 467 492 467 492 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00023	0.047	15.7	0.5	3	23	342	365	340	365	0.94
2	5	0.091	18	7.5	0.2	1	23	373	400	373	400	0.84
3	5	0.017	3.5	9.8	5.0	1	23	406	430	406	430	0.97
4	5	0.00029	0.058	15.4	0.4	1	23	436	461	436	461	0.97
5	5	1.2e-05	0.0024	19.8	0.3	1	23	467	492	467	492	0.96

Sequence Information

Coding Sequence: ATGCATATCCCCAACGCCATGGTATTGCCCTCCGTTACCCATCCAATGCAAAAGTTACAATACCTAGCATCAAGACGTGTTGCAGCTGTAGCAGCAGCAACTACAGCCTTACCTCCACCACCTCCGCCACAGTCCACATCCACGGGACCTGGACAGACTGGGCTTAGCCAAGCACCTCAGACACATGATTTTCATCCAGCCTACAGGATTCCTGGATATATGGATCATCTTTATTCCCTTCAAAGAGCAAGTCCAACACCATCCTTTCACGATAATTATCTTCCTAATTTTGCGCCATCATTCCATTTAACAGGGCTCGGTCTGAACTCAGATTACTTGGGGTCACGTGGTCCTTTAGGTGATATTCACCCAGCTAGTTCGTTGGCCAGCTCAGATTTTCATTTTAGTATAGATGGCTCCAGACACAACAGCCCTCGGCCAGGAAGTATCCGGGCAAGTATTAGTCGGAAGAGGGCTTTGTCATCTTCACCATATTCTGATTCGTTCGATATCAACTCGATGATACGATTCTCACCGAATTCACTTGCGACAATTGTTAATGGATCAAGAAATAGCAGCACTAGTGGATCGTATGGCCATCTATCAGCTGGAGCTATTAGTCCTAGCTTAGGAATACACAGCAGTATGACACCACATTTGCAACAACTGCAAGCACATCTGCTACGAGCTGGAGCGGGACTTCTACATCCAATTCCTACTCACCACACTTCGGCTGGTACTGGAATGTTCTCCCTTGGCCATCATTCTTTGCAGGGACCCGGAAATACAATATCAAAGTCTATTCATTTTGAGGAAATGCcattaaaaaacattgaacAGCCATCATCAACCACCGGAGTTGTACAGGTTGAAGCTGATAGTGCTTCGAATCCATTGGAAGTATCACGACGATACCGTTGCAAGCGTGAATCAATATTGACCCCACATCATAACGAAAATGATATTCCTAGTGTTGACACAACAGATATCAAAGATGAACCTGGCGATTTTATCGAAACTAATTGTCATTGGCGAGATTGTGGCATAGAATTTTCCACTCGAGAAGAACTCGTGAAGCATATCAATAACGATCACATCCAGGTCAATAAGAAGTCATTTGTGTGTCGTTGGGAAGATTGTTCTCGTGATGAGAAACCATTTAAAGCTCAATACATGCTTGTGGTACATATGCGTCGGCATACCGGAGAAAAACCTCATAAGTGCACGtttgaaggATGCTGCAAGGCTTATTCTCGTTTGGAAAATCTTAAAACACATCTTCGGTCACATACTGGTGAGAAACCGTATACCTGCGAGTATCCTGGTTGTAGTAAGGCCTTCAGTAATGCCTCTGACCGAGCCAAACACCAAAACCGAACACACAGTAATGAGaagCCATACATATGCAAAGCTCCAGGTTGTACTAAAAGATACACTGATCCAAGCTCACTAAGAAAACATGTGAAAACTGTTCATGGTGCTGAATTCTATgccaacaaaaaacacaaaggaTCTTCTGGTGAAGGTAGTAATGATGATGGGCCAAGAATCGGAACAAGTCATATAATCGATTCCAGTCCACATAGTGATGACATGCAGTCAGGAAAAACAACAAGTCTATCTAGTCCTAGCATCAAGTCCGAATCAGAGGCGAATTCTCCAGGACATCCACCTATCAACAGTCCCATGAATGTTTCTCATCGCGTTCTTAAGGGTAATGCTGACGAATACGAATGTATAACCTTGAACACACCTAACAGTGGAGATATTATGGATATGGAAGACCACAACACTTGGCCCTATGAAGAAGAGGACTTCGAGGTAGCTGAGTTGCCACTGGTTTTACGAGCCATGGTTGGGATTGGTGGTGCAGGCAGTGGAGGAGGTGGTATCTCAACGGCCAGTCCTCGTCATCGTTTCCGCAGTCGCCTTCAGTCGAAAGGCATGAACCCCACACTGTCTAATATACCAGAGCTAAATCGTTGTAACATTGGCATTGGTGAACTGAACCAGAGAATCACAGACTTGAAAATGGAACCTGGCACACCAACCACCACTGTTATATCCAAATTACCACCGCTTCAAAATCCGAATATGACTGAACTGCAAACTCGCCTGCAAAATTCCCAGTACGTACCAAATCCCTTATTGCGCAGAGATAGTAGCAATTCAAATGCTAGTACCTATTACTGCAGCATGCGCTCCATCGATACAAGCCGGCGTAGCAGTCAATTATCACAGCTTTCATCTATTTCAACTATGCGTCCCTCCTATAATACGGGATCATTTTATGATCCGATTTCGCCGGGATGTTCCCGTCGTTCTAGTCAAACGTCAGTTGCAATCGCAAATGGAAACAGTCTTCCACCGCAGCCTTCTTCGCATTTAATATCAACACACTTGCAACGCTTACAGAGCAACAacttttgtaattattcaagCAATAATGATTGTCACGGTCGTTTTTCAATACCAAATCTTTCAACGCATAATGTCATCAACGACGGTTTGGCACAGGCCTCTATGGATCGCCGAAGACAATCTGAACCAACAATAAATAAGAGCGTCGAAGGAATTACACTCTCGCCGTTACAATCGCTGATTATGAAATCTATAATACACAAAAGTAGTGCCAGATCCAAACAAACAGGTTCCTCCAGGGATCACCATCCAAATGAAGAAGTTAATTTAGATGAAGTTGAGGAGGATGAAATGGTCGAAAATAAGCTCGTCATTCCAGATGAAATGCTTCATTATCTGAATCAGGTAGCTGACAAGCCCGGTGATCAAAATTTGTTACCCGATTCCGAACAAGTAAACCGAACTGCCACTCCATGCGCTCCGCAAGAATCACAATCGCTCAAGGTCAACAACTGGCCACTTAATTCCGTAGCAGTAGAAACAGAGCAGCCACAACGTTCAACTACATTTTATCAACGTAGTTCATCAAATTTCAGTGCCTTAATCCCAAGACCTCAATCACATGAAATCCCAGTGGTTGAAAGATCTCATGTGCCACAACAAGAATTTGAGCCAACTTGTACCCTACGCTTGCATAATAACATACAGGGATTAGATTGTGGGTCACAAGCGTTGTGTAATTACTATCAACAACACCAAGAGCAACAGCAACATGGTCAGCCAACCACGCTCATGCCAACCCATCAACACAACTGCCACCAGTTCCACAGAACAAACGATTCGTTTTGTAGTCAACAACAGGTGCAGCACCCGCCACAAACCACACAACAGCAATGCATACATTCTTGCAACCATATCCCAGATCACTTTCACAATACGGGCAATAGTGCTTCTGGTACCTGTTCCACTCGTGTTAACGACTGTGCATCTATTTTAAATCCAAATAGCTTTTATGATTCAACGATGAAGAGCCTTTCAGACTTGAAGGCTGCCAAGTGCATATATTATCATGAACAGCAACCTAGGCACACCTCTGCCTTACATACACACCATAATCGGATATACGGTTTCCATTTCCAGGGACCACCGACATCAGTACCTTTGCCTTCAGCCCCACCCAAGGAAATTCAGTGTGGAGACATAAGCCAGTCCCAAATGTCACCAGCCGTTGCTCCTTCGATCCCACCATCATGTAACGATGTTAACATTGGAAATCCATGCGTTGGTAACCCCACCACGAGACCAGTAAATATTTCTACAATAAAATCTTCAACATCGGTGAAAGAGCTTCCAAATATCCCTGAGGAAGTCCAAATCGAGGCCTATAGCAACGGAATGCGACATGATACCTATCAGCGTACCCTTGAATACGTACAAAATTGTCAGAACTGGCTTGAAAATACAACGCAAATTGTAACCAGCTCGACACATCCAAGTTCAAATATGATTATTAAAGATATGACAACGTCGCTTAGTTCTCTTCTTGAAGAGAATCGTTTTCTACAGATGATTCAATGA
Protein Sequence: MHIPNAMVLPSVTHPMQKLQYLASRRVAAVAAATTALPPPPPPQSTSTGPGQTGLSQAPQTHDFHPAYRIPGYMDHLYSLQRASPTPSFHDNYLPNFAPSFHLTGLGLNSDYLGSRGPLGDIHPASSLASSDFHFSIDGSRHNSPRPGSIRASISRKRALSSSPYSDSFDINSMIRFSPNSLATIVNGSRNSSTSGSYGHLSAGAISPSLGIHSSMTPHLQQLQAHLLRAGAGLLHPIPTHHTSAGTGMFSLGHHSLQGPGNTISKSIHFEEMPLKNIEQPSSTTGVVQVEADSASNPLEVSRRYRCKRESILTPHHNENDIPSVDTTDIKDEPGDFIETNCHWRDCGIEFSTREELVKHINNDHIQVNKKSFVCRWEDCSRDEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGSSGEGSNDDGPRIGTSHIIDSSPHSDDMQSGKTTSLSSPSIKSESEANSPGHPPINSPMNVSHRVLKGNADEYECITLNTPNSGDIMDMEDHNTWPYEEEDFEVAELPLVLRAMVGIGGAGSGGGGISTASPRHRFRSRLQSKGMNPTLSNIPELNRCNIGIGELNQRITDLKMEPGTPTTTVISKLPPLQNPNMTELQTRLQNSQYVPNPLLRRDSSNSNASTYYCSMRSIDTSRRSSQLSQLSSISTMRPSYNTGSFYDPISPGCSRRSSQTSVAIANGNSLPPQPSSHLISTHLQRLQSNNFCNYSSNNDCHGRFSIPNLSTHNVINDGLAQASMDRRRQSEPTINKSVEGITLSPLQSLIMKSIIHKSSARSKQTGSSRDHHPNEEVNLDEVEEDEMVENKLVIPDEMLHYLNQVADKPGDQNLLPDSEQVNRTATPCAPQESQSLKVNNWPLNSVAVETEQPQRSTTFYQRSSSNFSALIPRPQSHEIPVVERSHVPQQEFEPTCTLRLHNNIQGLDCGSQALCNYYQQHQEQQQHGQPTTLMPTHQHNCHQFHRTNDSFCSQQQVQHPPQTTQQQCIHSCNHIPDHFHNTGNSASGTCSTRVNDCASILNPNSFYDSTMKSLSDLKAAKCIYYHEQQPRHTSALHTHHNRIYGFHFQGPPTSVPLPSAPPKEIQCGDISQSQMSPAVAPSIPPSCNDVNIGNPCVGNPTTRPVNISTIKSSTSVKELPNIPEEVQIEAYSNGMRHDTYQRTLEYVQNCQNWLENTTQIVTSSTHPSSNMIIKDMTTSLSSLLEENRFLQMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00984608;
90% Identity: iTF_00694180;
80% Identity: -