Basic Information

Insect: Eupeodes luniger
Gene Symbol: -
Assembly: GCA_951509635.1
Location: OX608074.1:90317037-90317992[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.5e-06 0.00089 21.1 0.7 2 23 76 97 76 97 0.97

2 8 1.9e-06 0.00038 22.3 0.9 1 23 103 125 103 125 0.98

3 8 2.4e-06 0.00047 22.0 0.5 1 23 131 153 131 153 0.98

4 8 0.062 13 8.1 7.9 1 23 159 182 159 182 0.97

5 8 2.6e-05 0.0052 18.7 3.5 2 23 190 211 189 211 0.97

6 8 0.003 0.59 12.2 1.4 2 23 218 239 217 239 0.95

7 8 0.4 80 5.5 0.2 3 23 247 268 247 268 0.86

8 8 0.00027 0.053 15.5 0.8 1 20 274 293 274 295 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.5e-06	0.00089	21.1	0.7	2	23	76	97	76	97	0.97
2	8	1.9e-06	0.00038	22.3	0.9	1	23	103	125	103	125	0.98
3	8	2.4e-06	0.00047	22.0	0.5	1	23	131	153	131	153	0.98
4	8	0.062	13	8.1	7.9	1	23	159	182	159	182	0.97
5	8	2.6e-05	0.0052	18.7	3.5	2	23	190	211	189	211	0.97
6	8	0.003	0.59	12.2	1.4	2	23	218	239	217	239	0.95
7	8	0.4	80	5.5	0.2	3	23	247	268	247	268	0.86
8	8	0.00027	0.053	15.5	0.8	1	20	274	293	274	295	0.94

Sequence Information

Coding Sequence: ATGAATCAAATAGTACACAACTTGTTGAGGACCTTGGCCAAACGAATAGAAGCAGTAGCTGAACCCCTAGTCTTACATCAGCAGGAATCAGAAAATGTTTCCATAGAATCTAGGACACCACCATCTATTGCTATTGATGCAACCCCCGCAGCGCACTTGAAAACCATCAAAACAAGTCACAATAAGAAGCCAGAGGGCAAGAGAAAAAAACAACGTACTCCAGGTCGATGTGACGTGTGCAATAGATCATTCAACGACTTATACAATCTGCGCATTCATAAGATGATACACACCGGTGAAATGCCATTTCAGTGCGAGGATTGTGGCAAAGGATTTCGCCAATACAACAAGCTGAAAATCCATTCAATTACTCATACAAATAATAAGCCTTTTGTTTGTGATATATGCGGCAAGGGATTCCGATATCGAAACTATCTTGCGATTCATAAGCGATTACACACCGGCGAGAAGCCCTATAAATGTAAATTATGTGATGAACACTTTCATTCGCTGCACAATCGACGCTTGCACGTAAAGTCCACCCACTGCCAAGTCGAGGAGAATTTAACGTGTCACATTTGCTCTAAGACTCTCTCGACCAAGTTTTACCTGCGAGTACATATGAGTCGGCATAGTAACTTAACCGACATTAAATGTTCGGTGTGTGAGAAGACATTTTTTACGATGGCTAAATTTAAGGAACACTTCGAATCGCATGCTGTTGAGAGTCCTTCGTGGTGTGAAATATGTCAGATAATGTTCCCGAGAAGTACAATTTATAGCGAACACCTTCTCAATACACACTTTATTGCTAGGCCTTATTATTGTCATATTTGTAGGAAGAATTTTGCACAAACCACAGAACTATATGCACATAGATCAATTTGCACAATTAAACAGTGA
Protein Sequence: MNQIVHNLLRTLAKRIEAVAEPLVLHQQESENVSIESRTPPSIAIDATPAAHLKTIKTSHNKKPEGKRKKQRTPGRCDVCNRSFNDLYNLRIHKMIHTGEMPFQCEDCGKGFRQYNKLKIHSITHTNNKPFVCDICGKGFRYRNYLAIHKRLHTGEKPYKCKLCDEHFHSLHNRRLHVKSTHCQVEENLTCHICSKTLSTKFYLRVHMSRHSNLTDIKCSVCEKTFFTMAKFKEHFESHAVESPSWCEICQIMFPRSTIYSEHLLNTHFIARPYYCHICRKNFAQTTELYAHRSICTIKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00427536;
90% Identity: iTF_00694092;
80% Identity: -