Basic Information

Insect: Eupeodes luniger
Gene Symbol: Clamp
Assembly: GCA_951509635.1
Location: OX608073.1:80145694-80148067[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.2e-05 0.0044 18.9 3.7 1 23 127 149 127 149 0.99

2 7 7.7e-06 0.0015 20.4 1.0 1 23 385 407 385 407 0.98

3 7 4.6e-06 0.00093 21.1 0.1 1 23 413 435 413 435 0.99

4 7 3.1e-06 0.00062 21.6 3.2 1 23 441 463 441 463 0.99

5 7 1.8e-06 0.00036 22.4 0.4 1 23 469 491 469 491 0.98

6 7 1.5e-06 0.0003 22.6 0.4 1 23 497 519 497 519 0.98

7 7 8.7e-05 0.017 17.0 0.2 1 23 525 547 525 547 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.2e-05	0.0044	18.9	3.7	1	23	127	149	127	149	0.99
2	7	7.7e-06	0.0015	20.4	1.0	1	23	385	407	385	407	0.98
3	7	4.6e-06	0.00093	21.1	0.1	1	23	413	435	413	435	0.99
4	7	3.1e-06	0.00062	21.6	3.2	1	23	441	463	441	463	0.99
5	7	1.8e-06	0.00036	22.4	0.4	1	23	469	491	469	491	0.98
6	7	1.5e-06	0.0003	22.6	0.4	1	23	497	519	497	519	0.98
7	7	8.7e-05	0.017	17.0	0.2	1	23	525	547	525	547	0.96

Sequence Information

Coding Sequence: ATGGAAGACATAACCAAAACAATAATGTTCACAACAAATACCATACAAAACGGTCAGCCAACAATTCAATATCAAACGGCCGATGggacaattttaaaacaaccaaaaatagAGGGccaaaaaagtcaacaagattaTCCAACATTTTGTTACACTACCACCAATGGTAATGCGACAACTGTTAATCTGGCCCAACTAACTACAGACGATAATAAAACATGTTATATTGCCCAACCCATTGGTGGCTACAATTATGCATTGGTGAATCAAATGCAGCTAAATCAAGGAGGAACTGTGGGTATTGCTACTGTTGATAATCAAGGTCGTTTACAAGTTATAAATAAACCCATCGCTGCCAACACAATATCGAATATTAGTTTTAAATGCGATGTTTGCGGTCTTATGTTTTCCCATTTGACTTTATTAAATCATCACAAACGTATTCATGCTCAAGATGGAAGCGATACAAATCAGGATCAGATCGCTGTGGTAAACGCACAAGGGCTTGTGCAAACCCAAAATATAATCACCGAAAATGGGCAACCCCTGGGACAGATACAAATAGTTGCAACGGAATCATTGGAACCTGCTAGCTCACATTCCATGCAGCAAACGGCAAACGAGGTCACGGTTACAACAGCAAAGACCCTAACCCTAGAAAAGTCCAAATGTATATCATGCGGTGGACAAATCCTTCAGCCTACGAAAAGAAAAGGCCCGAAGATAGTGCGATGTGATAATTGTGCTAACAACGATAATTCAAATGGCAATATGCAAACGCAAACGTCACAGGCGACGCCTACACAAATATTTGTGGCGCCTGATGGAGAAATAAAATTCGAAATGAATGAAATTCCGAGTGGAACAAGTGAATCATCGATGGATTCACTTAATGCCCAAAATATTATTCCAATACAACAAGGAAACGGAGGCAATCAATCGAATAGTGGTAGGAAAAATCAGCAccaacatcaacatcagcaacagGAAATTATAACTGACAATAGTGGATGCAATGAAACTATAGTTGGCCATCATCCAGTTAAAAAGAGAAATCTTGCAACAGTCACAAAGTGTCAAAAGTGCAATGGATCTGGGGTAATATTTGTAGGCGGCAGTCAGCGGCAAGTCAAATCAGAaacaCCCAAACCTTTTACTTGCAATATTTGCGGGGGTACGTTTTCGAGGTATTCCAGTTTGTGGTCCCATAAAAAGTTACATAGCGGtgagaaaaattataaatgcaCCATCTGCGGTTTGGCATTTGCAAAAGcggtttatttgaaaaatcacgCTAGAATTCACACTGGTGAAAAGCCTTACAAATGCCAGACATGCGGAATGCAATTCTCTCAATCACCCCATCTTAAAAATCACGAACGAACCCACAGCGGCGAAAAGCCGTATGTGTGCGAAGTCTGCGATAAAGGATTTGCCCGCCATGCTACATTATGGAATCATCGTAGAATTCATACTGGAGAGAAACCATATAAATGTGACATCTGTGGATCAGCCTTCAGTCAAGCAGCCCACCTTAAAAATCACGCCAAGGTTCATTCCGGTGAGAAACCATTTAAATGTGATATTTGTTCAGCAGCGTTTGCTGATCGCTTTGCTCTCAAGCGACACCGAGGAATTCACGAGAAATATGgCCAAACAGCGCCTCGCCATTCATCTCAATTACAAAATCATGACGATCAAGGTCAGATAACACAATCAATGGTTATCCATAAACAGGAAATGCCAGAAATGGACGATGAAGCCCAACACGAAGTCATTATTGCGGGATTATAA
Protein Sequence: MEDITKTIMFTTNTIQNGQPTIQYQTADGTILKQPKIEGQKSQQDYPTFCYTTTNGNATTVNLAQLTTDDNKTCYIAQPIGGYNYALVNQMQLNQGGTVGIATVDNQGRLQVINKPIAANTISNISFKCDVCGLMFSHLTLLNHHKRIHAQDGSDTNQDQIAVVNAQGLVQTQNIITENGQPLGQIQIVATESLEPASSHSMQQTANEVTVTTAKTLTLEKSKCISCGGQILQPTKRKGPKIVRCDNCANNDNSNGNMQTQTSQATPTQIFVAPDGEIKFEMNEIPSGTSESSMDSLNAQNIIPIQQGNGGNQSNSGRKNQHQHQHQQQEIITDNSGCNETIVGHHPVKKRNLATVTKCQKCNGSGVIFVGGSQRQVKSETPKPFTCNICGGTFSRYSSLWSHKKLHSGEKNYKCTICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGEKPYVCEVCDKGFARHATLWNHRRIHTGEKPYKCDICGSAFSQAAHLKNHAKVHSGEKPFKCDICSAAFADRFALKRHRGIHEKYGQTAPRHSSQLQNHDDQGQITQSMVIHKQEMPEMDDEAQHEVIIAGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00672376;
90% Identity: iTF_00724993;
80% Identity: -