Basic Information

Insect: Eupeodes luniger
Gene Symbol: grau
Assembly: GCA_951509635.1
Location: OX608075.1:86914066-86926606[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.054 11 8.2 0.1 2 23 282 304 281 304 0.94

2 19 0.019 3.7 9.7 1.4 1 19 336 354 336 359 0.96

3 19 0.016 3.2 9.9 1.1 1 23 367 389 367 389 0.94

4 19 3.5e-05 0.0071 18.3 0.2 1 23 397 420 397 420 0.94

5 19 0.8 1.6e+02 4.6 0.1 3 23 428 448 426 448 0.95

6 19 0.061 12 8.1 1.1 2 23 457 478 456 478 0.96

7 19 8.5e-07 0.00017 23.4 0.6 1 23 483 506 483 506 0.97

8 19 0.00057 0.11 14.5 2.3 1 23 512 534 512 534 0.97

9 19 4.1e-05 0.0082 18.1 6.2 1 23 540 563 540 563 0.98

10 19 0.17 33 6.7 0.1 2 23 722 744 721 744 0.94

11 19 2.1 4.3e+02 3.2 0.2 6 23 753 770 753 770 0.98

12 19 0.00079 0.16 14.0 3.3 1 23 776 799 776 799 0.97

13 19 0.00031 0.062 15.3 1.3 1 23 807 829 807 829 0.94

14 19 1.7e-05 0.0033 19.3 0.3 1 23 837 860 837 860 0.96

15 19 2 4.1e+02 3.3 0.1 3 23 868 888 867 888 0.93

16 19 0.032 6.5 9.0 0.3 2 23 897 919 896 919 0.95

17 19 2.4e-05 0.0049 18.8 0.1 1 23 926 949 926 949 0.97

18 19 2.1e-06 0.00042 22.1 3.7 1 23 955 977 955 977 0.99

19 19 0.00034 0.068 15.2 4.7 1 23 983 1006 983 1006 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.054	11	8.2	0.1	2	23	282	304	281	304	0.94
2	19	0.019	3.7	9.7	1.4	1	19	336	354	336	359	0.96
3	19	0.016	3.2	9.9	1.1	1	23	367	389	367	389	0.94
4	19	3.5e-05	0.0071	18.3	0.2	1	23	397	420	397	420	0.94
5	19	0.8	1.6e+02	4.6	0.1	3	23	428	448	426	448	0.95
6	19	0.061	12	8.1	1.1	2	23	457	478	456	478	0.96
7	19	8.5e-07	0.00017	23.4	0.6	1	23	483	506	483	506	0.97
8	19	0.00057	0.11	14.5	2.3	1	23	512	534	512	534	0.97
9	19	4.1e-05	0.0082	18.1	6.2	1	23	540	563	540	563	0.98
10	19	0.17	33	6.7	0.1	2	23	722	744	721	744	0.94
11	19	2.1	4.3e+02	3.2	0.2	6	23	753	770	753	770	0.98
12	19	0.00079	0.16	14.0	3.3	1	23	776	799	776	799	0.97
13	19	0.00031	0.062	15.3	1.3	1	23	807	829	807	829	0.94
14	19	1.7e-05	0.0033	19.3	0.3	1	23	837	860	837	860	0.96
15	19	2	4.1e+02	3.3	0.1	3	23	868	888	867	888	0.93
16	19	0.032	6.5	9.0	0.3	2	23	897	919	896	919	0.95
17	19	2.4e-05	0.0049	18.8	0.1	1	23	926	949	926	949	0.97
18	19	2.1e-06	0.00042	22.1	3.7	1	23	955	977	955	977	0.99
19	19	0.00034	0.068	15.2	4.7	1	23	983	1006	983	1006	0.98

Sequence Information

Coding Sequence: atGGTGTGCCGTTTATGTTTAATAGATGCCGATGataatattacaatatttggtgaagaaaaaatccaaaagtATATCGCCAAGTTTCTACAATTAGAgCTATCACCAGAAGATCCCTTTTCAAAAGTGATTTGTGCCCGATGTTGGCATCAATTggataattttcaaaacttttgtttGGAAGTAGAGCAAGCCCAAAGAACTCTTAATGCTTCGATTGTAGATTCAAAACAAGATTTACCAGCAACAACACAAAATTTTGATCTGCTTAAAAAAGATATCGATGATTCTGATGATGATAACCGCGATAATGATGAATTATTTTTCGGACTTGATGAAGAAATTATTAAAGCAGTTGAGGTCAGTTGTGAATTGACGGAAATAAAAACACCAACTGATTCCTCagaaacaaatgaaaatgttcCAAATCGAAGACTAACACGACAGTCAACCATTCGAAAATTGGAAACCACTGACATTCCTGAAATAGAACCGGTCAAAAGAAAACGTGGTCGACCTAAAAAGGgagaagttaaagttaaaacagAAGAACCaatcgaagaagaagaaaaagatgtAAAGACTGAGTTGAATTCAACCACTGAAAAGGATGAATCAActaaacaagaaaaagaagaagaagtggAAGGCAAAGATGAAAAAGATGACAAAACTGAATTAAATGATCTAAGCACCGAATCGAATTCAAAGAAACGACGAGGTCGACCCAAAAAGGGAGAAAAAGTTGTTCCAAAAGTTAAAGGACCCAAAACAGAATCTAGCGCCAAAATGATGCAAACTGCCAGAGAATTCGATGAGATCATTCAGAAAAATATGAATCTTTCGTGCAACATTTGTTCGGTAAGGCTTATTGATTTTGCCGAACTAAAACGACATTTTCGAGCTGTTCATCAACGTCGAGGATATGCTGTTTGCTGCAATAAGCGTCTATTCAAACGTGGTCTGGTTGTGGACCATATAAATGTTCATAATAACCCAGAGTATTTTAAgTGTGAAAAATGTGGCAAGATTCTGGCTGATAGAATGTGTCTGCGCAATCACGACCTGTTATTCCATCAAAAGGAAGAATTGAAGACATTTCAATGTGCGTTTTGCCCCAAGAAATATGCCAAACAGTATCTGCTGGATCAGCATAGTGTAAAACATGTTTCACAGGATGAATGTACATTCTTTTGTGCTGAATGTGGAAAAGGttttcccTCGAACGCAACTCTTACTAAACATGTTAATCAAATCCATTCGACGATATATGATAAAATGTGTGAAATTTGCGCCAAGCTTATTCGAGGAAATGCCAATTTCGATCGTCACATGGAAGAACACGAGGGTATTGTTCAGCCTCAAGTGCAATGCCAACAATGCGGTTCATggttaaaagataaaaacagCCTTCGAAAGCATATGTACAAACATGATGGTAAAACTTACACCTGTGACATTTGTGGCAAAGTTTCTCAAACAAAGAGTTCCCTTCAAAGTCACATGAGATACGTACACGAAGCATCGCGTACATTTCAATGTACATTTTGtgataaatcatttaaaaagagtgttattttaaaagaaCACATGACACAGCATACAGGGGAGGTGCTTTACACATGTCCACATTGCCCGAAGACATTTAACTCAAAAGCCAATATGCATTCCCACCGAAAGAAGAAGCATCGAGAGGAATGGGAGGCGAATAGGCGTTatccaaaaaaagaaatgaaaaacgaaTTATCACCAGAAGATCCTATATCTAAAGAAATATGCAATCTTTGTTGGCAGCAATTGGAAGATTTTGAAAAGTTCAGTATTCGAATAGAAGAAGCCCAAAAAACTCTTAGCCAAAAATTACAAACGGTGGATAAATATGACAAAAACAGTATtgaaaGTTTAAGTCACGTAAAAGAGGAAGatcaaaaagaagaagatgaatCAAGTGAGGACGACATAGCTAGGAAAAGAGTCGATGAAGATAAAGAAGAGGACATTATAAATACTGGGATCGATTGCCATACAAAGGAAAAAATTAGTCGATCGGAAAAAAGTGAACAAGTCGATACGAAGCAAAAATCTCCAAAGTCCGAAAGATTCCTTAAAGCTATGCAAACTTCTAAGGAATTCGATGAAATCATTCGAAAACACATGAACTTATCTTGTGATATTTGCTCCATTCAACTTTCCGACTTTGCCGAATTGAAACTCCATTTCCGACTTGTCCACAAACGTCGAGGATATGCGGTTTGTTGCAATAAAAGGCTCAACAAACGTGGCCTATTTGTCGACCATATTAACGTGCATAATAATCCTGAATATTTTAAATGCACAGAGTGCGGAAAAATTCTATCAGATAGAATTTGTCTGCATAAACACATTATATCATTCCATCAGACTGAAGAACTCAAAACATTTCAATGTGATTATTGCCCTAAGAAATTTGCCAAGCAATATCTATTGGATCAGCATAGTGTTAAACATGTTCCGGAAAATGAATTCACTTTCATTTGCAGTGAATGTAAAAAAGGgttcccAACAAATGCAACTCTAAAAGCACATTTGAAACAAGTCCACACAACAATGTACGACAGGATGTGTGAAATTTGTGCCAAACTAATTCGAGGGAAAGCAGCCTTTAAGCGACACGTTGAGGAACATGAGGGTATTGTTCATCCTCAAGTTCAATGCACACAATGTGGTGCTTGGTTAAAGGATAAGAGAAATCTAAGAAAACACGTTGTGACTCAACACGCAAACGATGATAAAAATTATTCCTGTGATGTATGTGGCAAAAAAGCACCCTCAAAAGGTGCACTTCAAAGTCACATGAGATATGTTCATCAGTTATCGCgtatttttaaatgtacatttTGTGAGAAGTCATTTAAAAAAGCAGATCATCTTAAGGAACATATGGCAACTCACACTGGAGAAGTACTCTATACATGCCCGTACTGTCCAACAACATTTAATTCCAGGTGTAATATGTATGCTCATCGAAAGAAGAAGCATCGAGAAGAATGGGAAGCTAACAGAGCTCTAACGAAAAAACAACAGAATACGATACAAACTAAAAAAGAACAGGATTAA
Protein Sequence: MVCRLCLIDADDNITIFGEEKIQKYIAKFLQLELSPEDPFSKVICARCWHQLDNFQNFCLEVEQAQRTLNASIVDSKQDLPATTQNFDLLKKDIDDSDDDNRDNDELFFGLDEEIIKAVEVSCELTEIKTPTDSSETNENVPNRRLTRQSTIRKLETTDIPEIEPVKRKRGRPKKGEVKVKTEEPIEEEEKDVKTELNSTTEKDESTKQEKEEEVEGKDEKDDKTELNDLSTESNSKKRRGRPKKGEKVVPKVKGPKTESSAKMMQTAREFDEIIQKNMNLSCNICSVRLIDFAELKRHFRAVHQRRGYAVCCNKRLFKRGLVVDHINVHNNPEYFKCEKCGKILADRMCLRNHDLLFHQKEELKTFQCAFCPKKYAKQYLLDQHSVKHVSQDECTFFCAECGKGFPSNATLTKHVNQIHSTIYDKMCEICAKLIRGNANFDRHMEEHEGIVQPQVQCQQCGSWLKDKNSLRKHMYKHDGKTYTCDICGKVSQTKSSLQSHMRYVHEASRTFQCTFCDKSFKKSVILKEHMTQHTGEVLYTCPHCPKTFNSKANMHSHRKKKHREEWEANRRYPKKEMKNELSPEDPISKEICNLCWQQLEDFEKFSIRIEEAQKTLSQKLQTVDKYDKNSIESLSHVKEEDQKEEDESSEDDIARKRVDEDKEEDIINTGIDCHTKEKISRSEKSEQVDTKQKSPKSERFLKAMQTSKEFDEIIRKHMNLSCDICSIQLSDFAELKLHFRLVHKRRGYAVCCNKRLNKRGLFVDHINVHNNPEYFKCTECGKILSDRICLHKHIISFHQTEELKTFQCDYCPKKFAKQYLLDQHSVKHVPENEFTFICSECKKGFPTNATLKAHLKQVHTTMYDRMCEICAKLIRGKAAFKRHVEEHEGIVHPQVQCTQCGAWLKDKRNLRKHVVTQHANDDKNYSCDVCGKKAPSKGALQSHMRYVHQLSRIFKCTFCEKSFKKADHLKEHMATHTGEVLYTCPYCPTTFNSRCNMYAHRKKKHREEWEANRALTKKQQNTIQTKKEQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -