Basic Information

Gene Symbol
-
Assembly
GCA_951509635.1
Location
OX608073.1:253313902-253348102[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.0036 12 7.7 0.2 23 43 34 53 21 56 0.83
2 7 0.23 7.3e+02 1.9 0.2 3 31 172 199 170 205 0.82
3 7 0.00037 1.2 10.9 0.4 19 45 375 406 354 407 0.74
4 7 0.002 6.3 8.6 0.3 22 43 517 544 493 547 0.80
5 7 0.02 65 5.3 0.1 21 43 673 694 645 697 0.82
6 7 0.091 2.9e+02 3.2 0.4 23 45 798 819 790 820 0.89
7 7 0.017 55 5.5 0.1 21 43 916 937 909 940 0.86

Sequence Information

Coding Sequence
ATGTCAACCGAAGAATTCATCAGTGCAATTAAATCTAGAGAAATAATATGGAATACAAATCATCGCAGTTTCAATAATAGACAACAGAAACAAGTACTCTGGGATGAAATCGCAGACGAATTCAATCTTTCAGtcGATGAATGTAAAAGGAAATGGAAAGGACTTCGAACGACACTGCGCCAGAGTATAAAACCCATTGATAAGGATTTGCCGCCAGGCAGCAGCAGAGTTTTCCCAAAGTGGAGACATATTGAAGATATGAGTTTTTTAATTCCTTTGATGAAAACAAGAAGCAATGGTTTTGCTAATGATAAAATATTCGATGAGTGGTCAATCTCTAGTGCAGAAAATGATGTAGGAGCTTCTCCATCAGATCCCAATTCGTATGTAGATAACCAAACGACCAAAACCATAGGAAATCCAATAAGCCTATTGATTGAAGAAGTCAAACAACAGCAGATTCTTTGGAATGAACATGATCCTAATTTCGAGTGTATAGTGTTAAAAGATGAAGCATGGACCGAAATTGAATCTAGATTAGCAATATCAGCTTTTATCTGCAAGAAGAAGTGGGAAAGTATTTTAGAATATTTGGCTGATGAATGCGCCAAGCATCCTGACAATTCGAGTCCTTGGGCGTACTTTAAGCAGTTGGATTTTGTGCAACCGTTTATTCAACAGCGCAACAGAGGTACTGCTTCCATCCCAACTGTGGCAGCAACTGTATCTTGGTATAATAGTTTGATAATTTTAACCATTTTCGTCGAGATGCCCAATGTAATAGTTGAGGAAGTGAAGAAAAAATGGAAAGCACTAAGAGATGTCTTTGCTAAACACTATGCTAAGAATCCAGATGAAAATACTAACAATTGGCCTTATTTTAAGCAAATGATATTCTTAGCCCCATATCTTAAGGGCAGCAAaTTAAGTTTTGCTAAATCTTTTGAACGTACCCAAGAGTCGGATGATGAAGAAAGCGTTTCATCGGTTGCTTGGGAATCGGATAACAATGAAACAAAGAACCAAACACCAGCGGTAAAGGAAACaagcaaattttcaaatgaaGAATTTATTGAAGCAGTCAGAAAACAACAAATCTTATGGGACTcgacttttaataattttaagaacaataaattGAGATGTGTGGTGTGGAAAGAGGTTGCAGATTATTTTGGATTATCAGTCATTGATTGCAAAAAGAAATGGAGAACACTTCGTGATCTGTTTGTTCGAACACATCTAAAACCAATAAGAGAAGAAGATAAATCATGGAAACATTACGACCAAATGAAATTCTTGGTACCGCATTTAAGAGAAAGAAAAAACGATCCCTTAGATCCttcattaaattcaaattcatttgaCAATTCAGCTGAAGATATAAAAATTGAAGTAAAACCAAGTTTCGTTTCAGCAGCAGaggaAACACAAAATGATGAAGAAAAAACAGCACAAGTATTagatgaacaaaatttaaacgagTTTATTAGACTTGTAAAGCGACATGAGGTTTTATGGAATACAACCAACAAGAACTATAGAAACAATGAGTTTAGATTCCAAGCCTGGGAGGATATATCTGAACATTTTTCAATGTCAAcaATTGATGACTGCAGGAAAAGATGGAAGGCACTAAGAGACAACTTTTCTCGACATTATTATAAACCCATAAGAGAAGAAGACAAATCTTGGAAAAACTATCACGATTTGAAATTTCTAATACCacacttaaaatataaaaaATGTGCAAATGCATTAAAGAGTCTTCCAAAAACACCagatttcatacaaaaacctgAACCTGATCCTGAACCTGAGAATGttataataaaacaagaacaaatGGAAGAAGATGAAAGTATGTCTAGTGAGTTTGAGgaaacgaacaaaaatgataatgGATTGAAAACAGCAGATAAAATTTGTTCAGATGAATTTATTGATATGGTAAAGCAACATGAAATGTTATGGAACACTGaagatgaaaattataaaaacaacgaGTTAAGAACCAAAGAATGGGAATTGATAGCGGTTCATTTTGAAACTTCGGTTGATGAATGTAAAAAGAAATGGAAAGCACTCAGAGATTCATTTGTTCGAAATTATTTCAAACCCATAAAGGAGAAGTATAAAAGTTGGAATTACTATTCCAAAATGAAATTCTTGGGACCACATGTAAAATACAAGAAggATAAAAGTCTAATAGGCGATCCGGAATTCCCACGAAAAGACGATGAGCCGCCTTCCAGTCCATCggaggATGAAACTGAATTAAACCCAAAAAAGTTTACAGTGAAAGAATTTgttaatgaaataaagaaacacACAATATTGTGGGATCTCAGCGATGAAAGGTGTAGAATGAGGAAATATAGATTGCTAGCATGGAAAGAAATATCTGCTCATTTTAGTGTATCAACTTTGGAATGTAAAAGAAAATGGGCCACACTGAGAAGTGCTTTTATCCGGGAATTCGCTAAGTGTCCTGACAATGATACGTGGGGAAATTTCAAAGAATTGGACTTTTTGTTGCCGTATCTCAAGGCGAATGTACTTGGAGAAATCGGTTATGAAGACAATAATGACTCTGATTCGTGTAGCGGTCAAGCAGGGAATTTACATATCCAAAAAACTACCGCGAATGAAAAATGTACAATTAAGTTCATCAAATCGATAAAAGAGAAACAATTACTTTGGAATTGGTCAGATGATGACTATAAAGACACAAACAAAAAGGAAGAAGCTTGGGGACTTATTGCAAATAAATTTGGCTTGCCAAtTGCTCGGTGCAAAGAAAGGTGGCTGGCGTTGAGAAACTGTTATAATCGAGTTATTCTTAGCCAATCAAATAATCCAAAATATTCATGGAAGTATTTGGAAGAAATGAATTTCTTGAAGCCTTTCGTCAATGTCGACACtgATGCATCGCTCTTTGTCGACGTTTCAGGAAGCTTGAGCTTTGATGATATCATAGAAGAATACAGTTTCCCAGAAGAACCtatggaCGACGATCAAGACGATGCGCTTTATGAAGAACTTTTCGAATGTTCGCCATCTgaattttcacaaaatattgaaaaagtcGAAATTCCAAAGCACAATACTCCCGATCGTGCCACCGCCGCTGCTAAAAGAAGAAGATGCTCAGAAGAATCGTCTGATGATGAGGATAaggaattttttcaaatcataAAAGAAACTATGAAACAATTACCAAGTGATGTTAAGAGTGACGCTAAAGGTCACATAAAAGCTTACTTAAAAGTAATTGCATCAAATCATAATTTATGGAATTTCAATCtcgattga
Protein Sequence
MSTEEFISAIKSREIIWNTNHRSFNNRQQKQVLWDEIADEFNLSVDECKRKWKGLRTTLRQSIKPIDKDLPPGSSRVFPKWRHIEDMSFLIPLMKTRSNGFANDKIFDEWSISSAENDVGASPSDPNSYVDNQTTKTIGNPISLLIEEVKQQQILWNEHDPNFECIVLKDEAWTEIESRLAISAFICKKKWESILEYLADECAKHPDNSSPWAYFKQLDFVQPFIQQRNRGTASIPTVAATVSWYNSLIILTIFVEMPNVIVEEVKKKWKALRDVFAKHYAKNPDENTNNWPYFKQMIFLAPYLKGSKLSFAKSFERTQESDDEESVSSVAWESDNNETKNQTPAVKETSKFSNEEFIEAVRKQQILWDSTFNNFKNNKLRCVVWKEVADYFGLSVIDCKKKWRTLRDLFVRTHLKPIREEDKSWKHYDQMKFLVPHLRERKNDPLDPSLNSNSFDNSAEDIKIEVKPSFVSAAEETQNDEEKTAQVLDEQNLNEFIRLVKRHEVLWNTTNKNYRNNEFRFQAWEDISEHFSMSTIDDCRKRWKALRDNFSRHYYKPIREEDKSWKNYHDLKFLIPHLKYKKCANALKSLPKTPDFIQKPEPDPEPENVIIKQEQMEEDESMSSEFEETNKNDNGLKTADKICSDEFIDMVKQHEMLWNTEDENYKNNELRTKEWELIAVHFETSVDECKKKWKALRDSFVRNYFKPIKEKYKSWNYYSKMKFLGPHVKYKKDKSLIGDPEFPRKDDEPPSSPSEDETELNPKKFTVKEFVNEIKKHTILWDLSDERCRMRKYRLLAWKEISAHFSVSTLECKRKWATLRSAFIREFAKCPDNDTWGNFKELDFLLPYLKANVLGEIGYEDNNDSDSCSGQAGNLHIQKTTANEKCTIKFIKSIKEKQLLWNWSDDDYKDTNKKEEAWGLIANKFGLPIARCKERWLALRNCYNRVILSQSNNPKYSWKYLEEMNFLKPFVNVDTDASLFVDVSGSLSFDDIIEEYSFPEEPMDDDQDDALYEELFECSPSEFSQNIEKVEIPKHNTPDRATAAAKRRRCSEESSDDEDKEFFQIIKETMKQLPSDVKSDAKGHIKAYLKVIASNHNLWNFNLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-