Elun034594.1
Basic Information
- Insect
- Eupeodes luniger
- Gene Symbol
- -
- Assembly
- GCA_951509635.1
- Location
- OX608074.1:80762751-80764607[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-10 2.7e-07 31.7 0.0 3 39 17 53 15 55 0.95
Sequence Information
- Coding Sequence
- ATGGTTCGCAACTACGTTAAGAAAACTAACCGACAAGAATGGAGCATAGATGATATGCGACGAGCTATTCAAGAAGTTAAATCAAAGAAAATGAGTTGTAAGGCAGCTGCCCAGAACTATAAAATTCCTCGAACTACCttacaaagatttttaaaaaaagcaaatctAAATCCCGACCTTCCACTTGTTGTCAATAAAGTGGGAAATTTTAAACCTGTATTTAACGTGCATCAAGAGAATGAATTGGCCGAATATCTAAAGGATATGGAAGGGCGCTTGTTTGGCTTTTCTTTGAAGGAATTTCGAGAACTGGCGTATGAGCTagcagaaaaaaatgaaatacccAATAATTTTGACGCTGAAACACGCATGGCTGGAGAAGATTGGGCGCAGAACTTTTTAAAACGAAATGCAACGGTTTCATTACGAAAACCGGAAGCAACATCTGCAGCTCGAGCTATGGGATTTAACCGTGTCTCTGTCggcaatttttttcaacttcttgAGGAGTGCATCAAGAAATATGGGTTCTTGTCAAATCGAATCTTCAACGTTGACGAAACGGGCATCACAACAGTTGCAAAAAGTCTTGGGAAAATTTTGGCAACTAAAGGCAGAAAACAGGTAGGATCGCTTTCTTCATCGGAGCGAGGACAGCTTCTCACAGTGGAAATTTGTATGAGCGCTGATGGGTCGTACATGCCACCAATGTTCATTTTCCCACGTAAAAGAATGAAGGTCGAACTAATGGATGGAACACCTCCTAATTCTTGGGGCGAGTGTAACCAAAATGGATGGATcacaaaagatttgtttttaaagtggtTGAAACGATTCATTGAATGGTCGAGTGCAACTAAAGATCAACCCGTTTTGTTGCTGTTAGATGGGCATGCAAGCCACGTTAAGAGCCTTGAAGTGATAGATGTAGCAAGAGCCAATGGTGTGGTCATGCTTTGTTTTCCACCACATTGCACTCATCGGTTACAGCCCTTGGATGTCACTTTTATGAAGCCCTTGAGTTCTTACTATGGAGATGAAGTAAAGAAATGGCTCAGACAACATCCTGGCAGAACAGTTACACATTACCAGGTAGGACAGTTGTTCGGTAGAGCATATTTAAGAGCAGCCACAATGTTAGTCCCAATAAATGGTTTTCAAACGACTGGAATATGGCCGGTTAATTCAAATGTTTTCGAAGACCATGATTTCTTGCCTTGCCAAACCACAGACATGCCAAATGGGGAAGAGCGTCTACTCTTAGATGAAACAATTTGTGTCGACCCATATTCGGTACCACCAGGCTCATCAACGACCGCCGCCGATCCACTGATGTTGTCCCCAAATCCCGTTTCGGAAACCAATCAGTCCACAATGTCTACACCACATTCTGTTAATCCGATACCAATGGGTGCACTGTTATCCTCTCCAGAGCCCGATTTGACAAACAATGATGCACCAACGTCATCAACTTCATTCCAAAAGTTTTCTCCATCTCATATTGTAGCTGTTCCCAAAGCACCCGTTAAAAAAAGAGTTTCTAAGCGCAGGGGAAAGACTGCAATAATTACAAGCTCTCCTTACAAGGCGCAGCTAGAATCTGAGTCCACGAAGTCCAAGCCTCTtgttatgaaaaagaaaaaagcctcaacaaaaaagaaaactaccaGGAAGGAAGAATCTTCAGAAAGCGAGGAGGACGAAGAGTGTCTTTATTGTGGGCATTTATACTCCCAGTCTACAGAAGGATGGATTTCCTGCAGATCATGTGGTAAGTGGGCACATTGTTCTTGTGCTGGAGAGGATGATGTTGACGATGAATCTAGCCACATTTGCTTCAGTTGCAACCCAGTTTAG
- Protein Sequence
- MVRNYVKKTNRQEWSIDDMRRAIQEVKSKKMSCKAAAQNYKIPRTTLQRFLKKANLNPDLPLVVNKVGNFKPVFNVHQENELAEYLKDMEGRLFGFSLKEFRELAYELAEKNEIPNNFDAETRMAGEDWAQNFLKRNATVSLRKPEATSAARAMGFNRVSVGNFFQLLEECIKKYGFLSNRIFNVDETGITTVAKSLGKILATKGRKQVGSLSSSERGQLLTVEICMSADGSYMPPMFIFPRKRMKVELMDGTPPNSWGECNQNGWITKDLFLKWLKRFIEWSSATKDQPVLLLLDGHASHVKSLEVIDVARANGVVMLCFPPHCTHRLQPLDVTFMKPLSSYYGDEVKKWLRQHPGRTVTHYQVGQLFGRAYLRAATMLVPINGFQTTGIWPVNSNVFEDHDFLPCQTTDMPNGEERLLLDETICVDPYSVPPGSSTTAADPLMLSPNPVSETNQSTMSTPHSVNPIPMGALLSSPEPDLTNNDAPTSSTSFQKFSPSHIVAVPKAPVKKRVSKRRGKTAIITSSPYKAQLESESTKSKPLVMKKKKASTKKKTTRKEESSESEEDEECLYCGHLYSQSTEGWISCRSCGKWAHCSCAGEDDVDDESSHICFSCNPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253699; iTF_00693704; iTF_00693705; iTF_00693706; iTF_00334929; iTF_01253812; iTF_01253628; iTF_00694527; iTF_00694528;
- 90% Identity
- iTF_01253699; iTF_00693704; iTF_00693705; iTF_00693706; iTF_00334929; iTF_01253812; iTF_01253628; iTF_00694527; iTF_00694528;
- 80% Identity
- -