Basic Information

Gene Symbol
ct
Assembly
GCA_951509635.1
Location
OX608073.1:71083187-71103452[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-26 3e-22 79.9 0.0 3 71 535 604 533 610 0.94
2 3 4.4e-32 1.2e-27 97.3 0.0 3 77 970 1045 968 1047 0.96
3 3 5.9e-31 1.6e-26 93.6 0.0 3 77 1188 1263 1186 1265 0.96

Sequence Information

Coding Sequence
ATGAGTTCCATCGATGCATCCTATTACTCCAGGAAATCTGGTTTTCTGattAAAGCACTTATCGCTGAGGTTACCCGACTGCAAGCCCTCCACGAAGAACACATTGTACAAATACAAAgacttgaaaataatttagaaaCGAAAAGTCAACACATTCAGAGACTTGAAACTCGTCTGCAAACCGAAACACAACCATTAAAAAGCTCCGAAGTTTCTATTGCTGCAAACGTAAACACAATCGCCGAATCATGCCCGGTAGAAATTCGAGATCAGACGGAACCCATCACTTCTAACGTTCCCTCAGAACCATCATCAATGCCAGTGATGATAGTCGAAGGCattcaaattaaaaaggaaaaggaaaacCAattatcatcatcatctacGGCAGGTGACATCACACCTCATGAAGTGACAGCTGTAACTGGGGCTGGGGCTGGGGCTGGTACCGGGGCTATTGTCAATGACCCCAAACAGTTTCAAGAACTTTTAATCGAGAAAACCAAGACACTCTCGGCTGCAAATGAAGTACTCAAAGCCGAAGGAATTTCCAGTGATACAACAACTTTAGCAGCATCAGATGTAGACACAATCAAGTCTTCTGATGATATCGAAGCTGCAGCATGCGAGGTCTCTAACAATGAGTCAGATGCAAACCTCCAGCATCAGCAGGATTTGCAGTCTCCATGCGATTCAGCGACTCCATCAGACCAGACTCCGTCGTCAAATACAAATTTCCCAAATGTCGATCAGTTCGGTTCGCTGCTTGGCGGTGAGTTGGTTAATTCATATTGGCGTCGTGGCTTCGACCACTTGTCATTAGCTCCACCACCACCTTCGATGCCCTCGCAACAGACATCTTCAGCAACAACCGCCGCCGCCTCGGCTGCAATTGCGATAGCAGCACATCCACATCCACATCCACACCAACACCCACCGCCATCAGCAGCAACACACACAACCTCCAAAACGCCAAcatcgatttttcaaaatttcccatCAATTTTATCGTGCCGATCGCCTCCACCACTCCCATTGTCGGTCACTGGACCATCAACCACAACTCTTTTGAGTCAACTAGTCAATTCAACCTTCTCATCGAATTCAACTCCTTCTCTTCGAATAGATTCCAATtcaacgtcgtcgtcggtgACCACAACCACTGGCGCTCATCTCCAACAAGCTCCATTGCACCACCACCAGCATCTACATCATCAGCTTCCTGTTCTACAGCATCATCAGCAACATCACCAGGACTTCGAGAAGGCCAACAGCCATCATGATTCCTCATCAACAGCAAGCACTCCCAATCTGCAAGACCAGCGTTCCAATGATGGACACATGAGTGGTTCAAAATCCGCCAAAGCCCAAGAGGATAATAATAACTCACTAAGCTCCATGGCACATCTTCCACCTGCTTTCATGCCCAGTTTGCAATTCCAATTCCAAGATCGCGGTCCTTTCCGCTTTGCCGAAGACATCCAGCTACCACCTGGTGCCTCTATGGCTGGCCGATTGGGCGAATCCCTCATTCCCAAAGGGGACCCCATGGAAGCCAAGCTCCAGGAAATGCTCCGCTACAACATGGACAAGTACGCCAATCAAAGTTTAGATACGCTCCACATATCACGTCGCGTTCGAGAACTCCTCTCAGTGCACAACATTGGACAAAGACTCTTCGCTAAGTACATCCTCGGACTATCACAGGGCACAGTGTCCGAATTGCTCTCAAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGTTACCGAAAAATGCACGCCTGGGGATGCGATGATAACGCTGTGATGTTGCTCAAATCTCTTATACCAAAAAAAGATTCGGGCATTCCGCAATATGGACGAAATGATGACTCCATGTCGGATGATCGTATTGCACACATTTTAAATGAAGCTTCCAGCCTCTTGAAGACCCCTCAGGTACCAGGTTCACAGTTGCAGCAACAAATGAAACATGAATCCCAGCGTCTTCATCAGCACCAATCATCATCTCTTGATGATGAACAGAGCAATGACGAATCGAAGTCACCGCATGCTTCTTGTACGTCGCCTTTCTATAAAGACTCCCCAgtgcaacaacaacagcagcagcaacaacagcaacaaacacaacaacaacaacagcaacagcatcaGCAACGCCAAGACGCTCAGCGTCGAAGTGTTAAGCCCGATGAAATGTCACAAGACAAGATGGCGAGAATATATCAAGAGGAACTGCAAAAGATCATGACACGCACTCCACGTGACTCCTTTCCAagTTTTCTCTTTCCACACTTTTTTAGCGCTGCTGGTGGTCTCCCGCCTACAAATAGCGCAATGCCACCCGACGATATTCGTATGGCTTTAGAAGCCTATCACCGTGAAATGGCCAAGTTGCAGCAGAACAGCAGTGGAAATATACCCAACTTTCCGAATTTTTCCAGCTTGATGGCGCTGCAGCAACAAGTGTTGAATGGCGCTCAGGATCTATCCGTCCCAAAGGAAAACGAAATCAAAGTTAATGGCCAGCGACATTCGATGGAAAGCTGCGATTCCTCCTCCAATCAAACCAAAGAAACATCTGAAGAAGCCGCGCATCGTCACTCAAGTGCATTTAGCTTAGTTCGTCTTAAGCCAGATTCTGTGCCTGcacaaaattcaaattccaaTACAAATACCAATTCAGCTGCACCAAGTCCGCTAAGCAATTCCATACTTCCACCGGCTATGACAACTAGTGAGGACTTTTCCGCCGCTGCCAGTCCACTTCAGAGAATGGCCTCAATTACAAACTCACTAATTACACAGCCTCCAGTTACACCTCACCACACGCAGCCACAAAGACCCACCAAAGCGGTGTTACCACCAATCACTCAACAGCAATTTGACATGTTCAACAACTTAAACACCGAAGATATTGTCCGTCGTGTTAAGGAAGCTCTTTCACAGTACTCAATCAGTCAAAGACTATTTGGAGAATCTGTTCTGGGATTATCTCAAGGATCAGTTTCGGATCTTCTTGCGCGGCCAAAGCCTTGGCATATGCTTACACAAAAAGGCCGTGAACCTTTTATTCGGATGAAAATGTTCTTGGAAGATGAAAACGCAGTGCACAAATTAGTAGCCAGCCAATATAAGATAGCTCCCGAGAAGTTAATGCGGACTGGCAGTTACAGCGGCAGTCCACAAATCCCACAAGGTCTGGCGAACAAAATGAATAGCATTCCCATGCAGAAAATGATGAACGATCTTAAAATGGAGCCTCAAGCACAACATCTAATGCAGCAAATGCAAGCAGCTTCTGCAATGGCGGCAGCCGCTGCTGCAGGACACATGCAAAACGCCCAACATCAGGGAATGTTGCTAACTACCCCAGGGCTCCCACCACAACACGCAATAAGCCTACAACAAGCCGCCGCCAACGCTGCTGCTGCCAATGAAAAGAAGCCAATGATGATGCCAATTCACTCACCGCACCAAGCCAATGCCATGCGAAGCAACATGCACCAACACATGTCACCGACAGTCTACGAGATGGCAGCCCTCACTCAAGACCTAGATACACAGGTTATAACAACAAAGATAAAGGAAGCTCTCCTTGCCAATAATATTGGTCAGAAGATTTTCGGCGAAGCAGTTTTGGGGTTGTCACAAGGATCAGTTTCTGAGCTCCTCTCGAAACCAAAACCATGGCATATGTTGAGCATCAAAGGTCGCGAACCTTTCATTCGAATGCAACTGTGGCTTTCGGACGCAAACAATGTGGAACGCCTCCAGGTACTTAAGAACGAAAGGCGAGAAGCTAGCAAACGCCGACGATCTACAGGTCCAAATCAACAAGACAACAGCTCCGACACAAGCAGCAATGATACTGCTGACTTCTACACCAGCAGTCCTGGTCCTGGGTCAGTTGGTTCAGTTGGAGCAccaccaaacaaaaaacaacgtGTTCTCTTTTCTGAGGAACAAAAGGAAGCACTACGCCTGGCTTTTGCTCTGGATCCTTATCCAAATGTGGGAACCATTGAATTTCTGGCGAACGAATTGGGTTTAGCAACGCGAACCATTACCAACTGGTTCCATAATCACCGAATGCGCCTCAAGCAGCAAGTGCCGCACGGCCAGCCGTCAGAACCCGTTCCAAGTCGAGAAAATACCAACGCAACACCTTTCGATCCAGTCCAATTTCGTATTCTCCTTAATCAAAGACTGATGGAATTACAAAAGGAACGTATGGGTCTCAGTGGTGCCCCCATACCTTACCCACCGTATTTTGCCGCCAATCCAAACTTGGCGGCACTTATAAGTCGTGGTTTGCTTCCCGGTGGAACAGAACCCGATTTGCAAGCTCTAAATAACGCCTTCAAAGAACAAATGAGTGGTCTTGATCTTTCTCTTAAAAGGGAACGAGACGGAGACTACGACGATGATGGTGAAGATGAATCGCATCTATCTGATAATGAGTCCATAAATGAGAGTGACGAAAAGTCAGAGATGAGTGAAACACCCAGATCTTCACTCTATGGCTCCATGGGTCAATCTCGGACATCACGAAGGAAGCCTGCTGCCCCTCAATGGGTCAATCCCGATTGGCAGGGCGATGGTAAAACAGGGTTAATACCTCCACCTCCACCTGGAGGTACCACCGACAAAGAAGTCATCATAAACGGTGTTTGCGTTATGCAACAACAAGCTTCTGATTACAGCCGAAAATCCGGCAATGGCGAAGATGATGAAGAATGCGCTTCCGATGCCAACGATGATGAACCAACGACTCATCATCGTAATCAACCTTCGGACTGCGAAGATGCCCCTTCTGACATAGACCAAAGGTTCATGGAACCTGAAGTTCGAATTAAGCAAGAAGAAGACTGTGACAGCAATGATAGCCATCAAGATAACTTGGACTTAAggaaacaacaacaccaactcCAACATCGGGACGAAGAAGACGACACCCCAGGCGCAtggaattattaa
Protein Sequence
MSSIDASYYSRKSGFLIKALIAEVTRLQALHEEHIVQIQRLENNLETKSQHIQRLETRLQTETQPLKSSEVSIAANVNTIAESCPVEIRDQTEPITSNVPSEPSSMPVMIVEGIQIKKEKENQLSSSSTAGDITPHEVTAVTGAGAGAGTGAIVNDPKQFQELLIEKTKTLSAANEVLKAEGISSDTTTLAASDVDTIKSSDDIEAAACEVSNNESDANLQHQQDLQSPCDSATPSDQTPSSNTNFPNVDQFGSLLGGELVNSYWRRGFDHLSLAPPPPSMPSQQTSSATTAAASAAIAIAAHPHPHPHQHPPPSAATHTTSKTPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRIDSNSTSSSVTTTTGAHLQQAPLHHHQHLHHQLPVLQHHQQHHQDFEKANSHHDSSSTASTPNLQDQRSNDGHMSGSKSAKAQEDNNNSLSSMAHLPPAFMPSLQFQFQDRGPFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNDDSMSDDRIAHILNEASSLLKTPQVPGSQLQQQMKHESQRLHQHQSSSLDDEQSNDESKSPHASCTSPFYKDSPVQQQQQQQQQQQTQQQQQQQHQQRQDAQRRSVKPDEMSQDKMARIYQEELQKIMTRTPRDSFPSFLFPHFFSAAGGLPPTNSAMPPDDIRMALEAYHREMAKLQQNSSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRHSMESCDSSSNQTKETSEEAAHRHSSAFSLVRLKPDSVPAQNSNSNTNTNSAAPSPLSNSILPPAMTTSEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHLMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAANEKKPMMMPIHSPHQANAMRSNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALISRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSLYGSMGQSRTSRRKPAAPQWVNPDWQGDGKTGLIPPPPPGGTTDKEVIINGVCVMQQQASDYSRKSGNGEDDEECASDANDDEPTTHHRNQPSDCEDAPSDIDQRFMEPEVRIKQEEDCDSNDSHQDNLDLRKQQHQLQHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00694476;
80% Identity
iTF_00694476;