Basic Information

Gene Symbol
grh
Assembly
GCA_951509635.1
Location
OX608075.1:123406721-123471927[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.15 4.1e+03 -1.6 5.1 5 40 117 153 104 169 0.63
2 3 0.62 1.7e+04 -3.6 0.1 81 97 250 266 232 282 0.49
3 3 2e-55 5.4e-51 174.6 0.1 24 204 565 740 550 743 0.93

Sequence Information

Coding Sequence
ATGGATGAAACAGCAATCGCAACGACATCAAGTAGAAACAACACAGTAGTAGTTATAGTGACAATAGCAGCTgcaacatcagcatcagcaacaTCGTCAGCgagaCGAACGGTATTAACAAGCCAAGCTGATTCACCACCACCATCATTGCCATCAGCACCACAGGCACTGCCAATGTCGCTGGCGACATCTAGCAGTCCTGACCAAGTGATCATCCAAAATCATAGCTACCTTCCAACGTCCTCTGCTTCAAGATACTTTGAGCACCCGCTGAATATCTCACCCGGCCAAACGGTGCCGAATGACGATGATCAccatcagcagcaacagcaacaacaacagcatcacCAACAtcaccagcaacaacaacaacagcagcagcagcaacaacaacaacatcagcagcagcaacaacaacaacagcatcatcatcatttggTACCATCACCGACTTCGGTGAATTTGGGCGCATTGTCCAACTCACACCAGGTCCATCAGGTGCAGAATGCGAATGGCAGCACGTCGTTTGTTTACGAATACTACAAAGTATCAGACAAGGACAATGACGAATTGCATTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACacccatcatcaacatcatcggcGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCTGCAACAGCTGTTGTTGTAACCACCGATCAACAtcgccaacaacaacaacaacagcagcagcatcaaGCAATTAGCATTAAACGTGAACCCGAAGATCTGCGAAAGGATCCCAAATGCGGCAATAACGGTGCTggcaacaataataataacaacaacaacagtagCAATGGAAACGGCGCTGGTGGACACAGTCAAAAGgtATTAGTTGTACAATCACCTACGCCATCAATACAAATTAAGGATCCACCACCCAGTCCTGGAAGCCCAACAAACGAAACCATGTACGCTGCCGGCGGCAGCACACAAATTTACCTCCAGGGACCACACCAGACAGGTTCTTCTGTAACAGGTGGATCAAATGTTAACACACATAGTCCCAGCCCTGGACCATATATCTCACCGGATAGCTATGGAATGTACACAACCCGTCTTGCAACCGGACCCAATTCCACATTCATCTCGGAGCCATATTATCGTGAATACTTTGCTGCCGATGGACAAGGTGGCTATGCGCCCGCAACACGCACCGTCTATGGTGATAGTGAGGGACCACAACCGGGTACAACCTATGAGGGCCGTTTCACAACATCACACACTAAAAATGGTACACCTGTCTATGCAAAAACTGTTACAGCAGCCGGCCTCACAGTGGATTTACCAAGTCCCGATTCAGGAATTGGTGCTGATGCTATTACGCCGAGGgatcaaaataatttacaacagTCATTCGATTACACGGAACTATGTCAGCCTGGTACATTATTAGACAGCAGCGGTGCAATACCAGTTTCAGTAACTAGCATGCAACGTGCTGTTAGCATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAGTGGTGGTACACCAGGGACACCAGGAACAACACGATCAAGGCCATGGCATGATTTTGGTCGGCAAAGTGATGCCGATAAAATTCAAAtaccaaaaatATTCGTAAATGTAGGATTTAGATATCATCTAGAAAGTCCGATTAGTTCGTCACAAAGACGAGAAGACGATCGAATAACATACATCAATAAAGGACAATTTTATGGCATCACATTGGAATATATTCCAGACCAAGATAAACCaatcaaaaatacaacagtTAAGagTGTAATCATGTTAATGTTCCGAGAAGAAAAAAGTCCCGAAGATGAAATTAAAGCATGGCAATTTTGGCATAGTAGACAACATTCTGTTAAACAGAGAATACTAGATGCTGataCGAAAAATTCCGTTGGTCTTGTAGGATGTATTGAAGAAGTTTCACATAATGCTATTGCAGTTTATTGGAATCCATTGGAAAGTTCTGCAAagATCAATATTGCCGTTCAGTGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGGGTCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGAGATACACAAGTTTTCCATCGAGGCTATTGCCAAATAAAAGTCTTCTGCGATAAGgtcctAAGAGGCTACCTTGAGGAACTCCAGATATTTTCCGAGAATAAGGCTACAGTTGGGCCGGAGAGACGCATACATTTTCTAATGGCTTCTCTATAA
Protein Sequence
MDETAIATTSSRNNTVVVIVTIAAATSASATSSARRTVLTSQADSPPPSLPSAPQALPMSLATSSSPDQVIIQNHSYLPTSSASRYFEHPLNISPGQTVPNDDDHHQQQQQQQQHHQHHQQQQQQQQQQQQQHQQQQQQQQHHHHLVPSPTSVNLGALSNSHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNNNNNNSSNGNGAGGHSQKVLVVQSPTPSIQIKDPPPSPGSPTNETMYAAGGSTQIYLQGPHQTGSSVTGGSNVNTHSPSPGPYISPDSYGMYTTRLATGPNSTFISEPYYREYFAADGQGGYAPATRTVYGDSEGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVTSMQRAVSIHGGQNSPTTSLSGGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKVLRGYLEELQIFSENKATVGPERRIHFLMASL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00426114; iTF_00389383;
90% Identity
iTF_00426114;
80% Identity
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