Basic Information

Insect: Eupeodes corollae
Gene Symbol: prdm10
Assembly: GCA_945859775.1
Location: CAMAOS010000005.1:798294-813646[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00019 0.025 15.9 0.9 2 23 624 645 623 645 0.96

2 11 0.0016 0.21 12.9 0.8 2 23 678 699 677 699 0.93

3 11 0.056 7.2 8.1 3.5 1 23 719 741 719 741 0.98

4 11 7.6e-05 0.0098 17.1 2.0 1 23 748 770 748 770 0.98

5 11 0.007 0.91 10.9 1.9 1 23 775 797 775 797 0.98

6 11 0.52 67 5.0 5.9 1 23 803 826 803 826 0.96

7 11 0.03 3.8 9.0 2.3 1 23 831 853 831 853 0.98

8 11 0.005 0.65 11.4 0.4 2 23 860 882 859 882 0.96

9 11 0.00017 0.022 16.0 1.6 1 23 933 956 933 956 0.96

10 11 0.012 1.6 10.2 2.9 1 23 978 1001 978 1001 0.97

11 11 0.017 2.2 9.7 2.3 2 23 1033 1055 1032 1055 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00019	0.025	15.9	0.9	2	23	624	645	623	645	0.96
2	11	0.0016	0.21	12.9	0.8	2	23	678	699	677	699	0.93
3	11	0.056	7.2	8.1	3.5	1	23	719	741	719	741	0.98
4	11	7.6e-05	0.0098	17.1	2.0	1	23	748	770	748	770	0.98
5	11	0.007	0.91	10.9	1.9	1	23	775	797	775	797	0.98
6	11	0.52	67	5.0	5.9	1	23	803	826	803	826	0.96
7	11	0.03	3.8	9.0	2.3	1	23	831	853	831	853	0.98
8	11	0.005	0.65	11.4	0.4	2	23	860	882	859	882	0.96
9	11	0.00017	0.022	16.0	1.6	1	23	933	956	933	956	0.96
10	11	0.012	1.6	10.2	2.9	1	23	978	1001	978	1001	0.97
11	11	0.017	2.2	9.7	2.3	2	23	1033	1055	1032	1055	0.97

Sequence Information

Coding Sequence: ATGAATGAACGTGGCTATTTTGATTTTAAAAGACCCATTGGATCACATAATGACTATCGTACATCCACTTATAGAGGCCATTTGATATTACCTAACGAGGATTCTAGATTCATAAATCACGACTTCTCCAAGGATTACACACAGTTTCTTCAAAGTATAGGCGACGGTGGAGAGCGGTGCATAACCGAAAGTCAAGACCAATTTTCTTGGAAAATACTGAAACCTTCTGTTGTTGAAAAACCTCTATCCTCTAATGGAGTTGACTTCATGAAGTCATACGATGAAACTCATTTTCACAATAATCCTAAACAAATAACACATTTGTCAAGTGTTTCCCAAAGAGATTACCAATGGAAATCAAAATCTTTTCAAGGACAAACCCCACCACCCATATACATAACATCCGAAACAAAAGCAAATAAAAACATTTCGATTGATCGATGTAGATCTGGCTTTGGGAAATTATTGGATCCATCAGCAACAACAAATACCTTGACTTATAGAGCTTATTCCAAAGAAGAATCAGAATCCCAACACAATAATTATGGGTACGGAGGATTTCAAAGAATCAGTTCCTATGACCCTAATATGTGCACAACTGCAGCAAGGTTTAGTCCATTCTATGATAAGAACAACGTTTCGAAAATATCAAAAGAAAATGCCAGAGTCTATGATAGCCTTCCAGGCGTTCAACTTGCAAACCATAATGACGACAACGCTGCTGTGGTGTCTTCTGAAATTCTCAATCAGGGTTTAACCACTTCAAAAGTTGTCGACGACGACGAAGATGTCCCTTACATTGCGTATAGTAATGAAATACCAATTGACCATCAAGATGCCAACACAGAAATGTCGTGTTCAGTGGAATTCATTGACCAGAGATCAGGTAATACTTCCTCTGCTCTGGGTACTGTAGCTGGTGAAGTTGAAGTTGATTACATTCAACAAATTGCCAATCATCATAATGACCAGGAGACGGGAGAACCTATAGCAACCAATATAATCCTACATCGCTCACCAAATGGTCATTTATATCAAAATTTCTATGTTACCAATGAAGACGAAAGATCAGAAGAAATAGTTGAGCTTATTCCAATAAACTCTTCGGATGTTACACATCTGTGTGATGCGGATGGAGAAAGCTATGCCCTGCAACCGTATGAATTCACATCCGAAAGTCACTTAGAAACACTTGAACCACATCATCCAATTGACACGGATGTTGTTGACTTCCAAGAAAATGAACAACAAATAATCACAGCAGAAATGTTAACCAGAGATCAACAGAGAATTCTACTGGAGAGCACCATGTCACCATTGCTTGCAGCGGTTAATGACATCACTCAAAGAGACAAACAGTTCTTGTCTTGTGTTAATCGACAGGGTATAGAAGATAAATGTTCAGATGATTACAGTAATGAGATCAATGCCCAGAATACGGACTCGTCAGAAGATGATGACTATGAACCTTCTGTCTATGCAGTAAAAGAAATTCTGCAGAGAACAAAGTTTGGTCCATTCGAAGGAGAAACCCGTTGCACTAATGATATTTTTCTGAACATCTTAAGGTCTCAACATCCACGGCACTATCCTCTTTTGTTAGTTGGAAAGTCCAAAATTCTCATTGTTACCAATGAAAATACCTCCAATTGGATGCGATTTGTGCGTCTGGCCAAAACCTTCGCCGAACAAAATCTCCAAATAATCGAAGAAAATGATCGAATCTACTTTAAATGCAATCGTGATATTCATCCAAAAGAAGAACTTCGAGTTGGCTACCATAGTTCCTATGCAGAAATATATAATCTACCAATCTTGAAGCCATCGCTGGAGGAAACTCAAAAGAAATACGAATTTGATAACCCTTGGATGTGTTTTGAATGCGATCAAAGATTCCGAACATCACAAGAAATGCAAACCCACTTGAAAGTTCACGATTTAGAAGATGCATCATGCATCATATCGAAACGGAAAATCAAAAGGAAAAGAATTAAGTTCAAGAAGATCTCTGAATTGCCTAAGAATTCGAGTAGATGTTTGATTTGTTTTAAGGTTTTCATGACAAATGCAAGTTTAAAAAAACACTTTGCATTGCATATAGCTGCAAATAAAACAAAACCCAAAGTCATAAAATCACCAACAAAGCGTCCAATTCACAAATGCAGCTTGTGTTTGAAAAAGTTTCTATCCGAGAGTAAATTGAAGTCTCATGAGCGAATACACAGTGATATCAAAAAACCCCATAAATGCCCGAACTGTGATCAACATTGTACAACTCCAGCGGCTCTGGCAGCTCATGTTCGTAGCCACACAAATCGTCTTTATTCGTGCGTCTTCTGTCAAGAGACTTTCAAATATGTTGTAGATTTTAAAAAGCACGTTTCTAAGCATAAAGTTGATGGTTTCTTCATTTGTTTTCATTGTAAAAAGAGTTATAAAGAATATCACATAGTTCGGAGACATATACGAATTTTCCATCCAGCCGTGAAGTATCCATGCAACGAATGCGATCGTTTATTTCTACACATGAGTTTCTTGCGGCGTCACAAGGCCACTCATGCCAAAAAGAAATGTATTCAATGTCCGAAGTGTGATCAGCAATTCGAAAAAGTACTCGAACTTCGACAACATGTAAAGTCTTTCCACAAAACGAAGACAAAAATAAAAAAGGAAAAAGTTGCCGAGGAAAAATCAGTTGTTAAGAAAGAAGGTCAAAAAATGTCTCCCAAAAAAGATAAAGCTCTCAAAACCTCCAAAGAGAATTCAACAATTGCAGAAAATTATTACCAATGTCAATTCAAATGTGATGAATGTCACTTAGGTTTCAAGAGGCGTGGGATGCTTGTAAATCACTTGGCGAAAAAACATCCGGAGCAGAATATCGATGCAATTGATGAATTAAACCAACCAATAGTTAAACTTCAGACAATGTTCAAATGTCTTCATTGCCCAAAGCTCTATAAAAACAATGCAAAACGAAAAGCTCATATTTTAAAGAATCATCCGGGGATGGAGATTCCTCCGTCATTTCGAAAAAATCCCGTGCTTATAGATCCCAACGTCCAGACAGTGGGATGCATTAAGGCTGAGGTACAAAAGTGTCATTTGTGCTACAAACAGTACGTCTCAAGAATGCGTCTTATTGCACACTATCGAAAAGCCCACATGGACGAAAGTATACCAGAAGTTCAAAGCAAACAAGAGTATTTGATTCAGAATCTTATCGAAGAACCATGCATGGAATCGGTTTTAGATATTTACCAGCCTCCAATATCACCAGAAAATAAACTCTTGAAATTATCATCGGCAGCTCTGGAATTGTCCAGCATTGAAGATAGGAAGTATTTTGATTTTCTCAATGAAAGATCAGACACAACGGATTTAGGCAATCGGAATAGTTATAAAATCGAGGAAAATGAATTCGTTGAGAGTTCTTCGAATGCAGACTTGAATCGACTGCCGGAATTATTTGAAGAATCAATAGCCTGTATTTGA
Protein Sequence: MNERGYFDFKRPIGSHNDYRTSTYRGHLILPNEDSRFINHDFSKDYTQFLQSIGDGGERCITESQDQFSWKILKPSVVEKPLSSNGVDFMKSYDETHFHNNPKQITHLSSVSQRDYQWKSKSFQGQTPPPIYITSETKANKNISIDRCRSGFGKLLDPSATTNTLTYRAYSKEESESQHNNYGYGGFQRISSYDPNMCTTAARFSPFYDKNNVSKISKENARVYDSLPGVQLANHNDDNAAVVSSEILNQGLTTSKVVDDDEDVPYIAYSNEIPIDHQDANTEMSCSVEFIDQRSGNTSSALGTVAGEVEVDYIQQIANHHNDQETGEPIATNIILHRSPNGHLYQNFYVTNEDERSEEIVELIPINSSDVTHLCDADGESYALQPYEFTSESHLETLEPHHPIDTDVVDFQENEQQIITAEMLTRDQQRILLESTMSPLLAAVNDITQRDKQFLSCVNRQGIEDKCSDDYSNEINAQNTDSSEDDDYEPSVYAVKEILQRTKFGPFEGETRCTNDIFLNILRSQHPRHYPLLLVGKSKILIVTNENTSNWMRFVRLAKTFAEQNLQIIEENDRIYFKCNRDIHPKEELRVGYHSSYAEIYNLPILKPSLEETQKKYEFDNPWMCFECDQRFRTSQEMQTHLKVHDLEDASCIISKRKIKRKRIKFKKISELPKNSSRCLICFKVFMTNASLKKHFALHIAANKTKPKVIKSPTKRPIHKCSLCLKKFLSESKLKSHERIHSDIKKPHKCPNCDQHCTTPAALAAHVRSHTNRLYSCVFCQETFKYVVDFKKHVSKHKVDGFFICFHCKKSYKEYHIVRRHIRIFHPAVKYPCNECDRLFLHMSFLRRHKATHAKKKCIQCPKCDQQFEKVLELRQHVKSFHKTKTKIKKEKVAEEKSVVKKEGQKMSPKKDKALKTSKENSTIAENYYQCQFKCDECHLGFKRRGMLVNHLAKKHPEQNIDAIDELNQPIVKLQTMFKCLHCPKLYKNNAKRKAHILKNHPGMEIPPSFRKNPVLIDPNVQTVGCIKAEVQKCHLCYKQYVSRMRLIAHYRKAHMDESIPEVQSKQEYLIQNLIEEPCMESVLDIYQPPISPENKLLKLSSAALELSSIEDRKYFDFLNERSDTTDLGNRNSYKIEENEFVESSSNADLNRLPELFEESIACI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00694984;
90% Identity: iTF_00694984;
80% Identity: -