Basic Information

Insect: Eupeodes corollae
Gene Symbol: Rreb1
Assembly: GCA_945859775.1
Location: CAMAOS010000199.1:1059402-1065549[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.034 4.4 8.8 0.8 1 21 239 259 239 261 0.93

2 14 0.00032 0.041 15.2 0.2 1 23 271 293 271 293 0.98

3 14 9.1e-06 0.0012 20.0 5.2 1 23 299 321 299 321 0.98

4 14 0.51 66 5.1 5.9 2 19 531 548 531 554 0.95

5 14 4.4 5.6e+02 2.1 0.6 1 19 594 612 594 614 0.78

6 14 0.0084 1.1 10.7 0.1 1 23 764 786 764 786 0.97

7 14 0.00017 0.022 16.0 1.7 1 23 795 817 795 817 0.99

8 14 0.00044 0.057 14.7 2.0 1 23 823 846 823 846 0.97

9 14 0.0009 0.12 13.7 2.1 1 23 1190 1213 1190 1213 0.95

10 14 8.1e-05 0.011 17.0 0.3 2 23 1521 1542 1520 1542 0.97

11 14 0.14 18 6.9 6.3 1 23 1548 1571 1548 1571 0.97

12 14 2.9 3.7e+02 2.7 6.3 1 23 1678 1700 1678 1701 0.95

13 14 0.08 10 7.6 1.1 3 23 1750 1770 1749 1770 0.91

14 14 0.0013 0.17 13.2 4.8 1 23 1776 1798 1776 1798 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.034	4.4	8.8	0.8	1	21	239	259	239	261	0.93
2	14	0.00032	0.041	15.2	0.2	1	23	271	293	271	293	0.98
3	14	9.1e-06	0.0012	20.0	5.2	1	23	299	321	299	321	0.98
4	14	0.51	66	5.1	5.9	2	19	531	548	531	554	0.95
5	14	4.4	5.6e+02	2.1	0.6	1	19	594	612	594	614	0.78
6	14	0.0084	1.1	10.7	0.1	1	23	764	786	764	786	0.97
7	14	0.00017	0.022	16.0	1.7	1	23	795	817	795	817	0.99
8	14	0.00044	0.057	14.7	2.0	1	23	823	846	823	846	0.97
9	14	0.0009	0.12	13.7	2.1	1	23	1190	1213	1190	1213	0.95
10	14	8.1e-05	0.011	17.0	0.3	2	23	1521	1542	1520	1542	0.97
11	14	0.14	18	6.9	6.3	1	23	1548	1571	1548	1571	0.97
12	14	2.9	3.7e+02	2.7	6.3	1	23	1678	1700	1678	1701	0.95
13	14	0.08	10	7.6	1.1	3	23	1750	1770	1749	1770	0.91
14	14	0.0013	0.17	13.2	4.8	1	23	1776	1798	1776	1798	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACATCGATAAAGAAGGAAATAACTGATATGTCGTTGCTAAAGATGGAGCGCCGTCAATCAACAACATCAGATTCATCTGTTGAACCCATGGACTTGGGTCGATCGAATTCGAAACTATCCACAGATATGACCGATCACAGCAGCACAACATTACCAACAACAAAAACAACACAAATTAAAGATGCCATTTTATCAGATGCCAATACAAAGTATCGCTATGAATCCGATGCTGACGAATCAGCCGATGATAGAGATAGAGATCACCAAAGAAGATCACACAGTCAACATCACTATCATCATCGTCGGCGTGGCAATATGGTTCGCGACAAACGCACCGTCCTACTGGAATGCACCGACAGTCCACATTCTCTGCGAAAGAAATTTCGATTCAGCAGTAGTAACCATAATAATAACACAACCATGCCCGATGCTGTGATCAATTTAAAAACAAAGACATCGAATAATGATACTTCAATCAAATCAACTACAGCACCAACAAATCTAACAGCAACAACAAACAACGAATCGGGATTTGTAGATGCTAGCATAAGTCATGTTTTAAATACATCAGGCTCATCGGCGACCTCATCCACATCATCGTCGTCGCCTACTTCATCGTCATCGGCTTCGCCATCGGCAAGTAGTAATGTTGCGTCGGCCATATCCAGCCCAGAGTCGGGCATGGGTGAACGTGATGATATGAAGTACCTTTGCCCAATTTGTGAAGTAGTCTCGGCGACACCGCATGAATTCACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTTTATCATCTGCCTCCTCATTGGATCGGCACGTTTTGGTGCACACTGGTGAGCGGCCCTTTAACTGCAAATATTGCCAATTAACATTTACTACAAATGGTAATATGCACCGTCACATGCGAACCCACAAGCAACACCAGCAGCATTATCATCGTAATTCAAATGGTACAAAAGGTGCAAATGGTAGTAGCTCAAACCTATTACCAGTTCTACCACTTACTGAGCCATCGCCAGCAACTCAAACATCAACTGCTGTAAGTGTTTTGCCTCCAAAAACTACGACGACGACGACGACAAGCGTAGGCAACAATGGTGAAGTTTGTAACAGCAATGGTGACACAATTGCGGGTGGTGGAGATGGAGATGGTTGTGGTGGCGAAAGCTATGACAGTGATGGTGGTTGCTCAACAGATTCATCAAGTGGCATCAGCCAAAGTTCCAATAACAACAATAACAGCAATACAAACAACAACAATATAAGCAATTTTAAACGCAAGAGCACCGACAGCTTAGATGATTTGGCCATTATGAAACGACGGGTGAAGACCACGATAAACAACAATAATATTATCGATAGCATTCACGCCATCCCGGAGCAAAGTGGAATTGAATTGCCAGGCGTCAACGATGATAAGAAACAACAACAGCAACATCAACAGCAAAAGCTTTTTTGCCCGGTGTGTAATCGTGACGATTTCGGAGGAATGCTTGCCCTGGGAGATCATATGGACTCCGATCATTCGGACATTCCAGCCAAATGTCGTCACTGTGATGTAGTTTTCAAAACCCACAGGCAGCTAAATCTCCATCCATGCACTAGCAAACATAAGATCACACAGGGTTTCAAAGACCTGACGTTTGTTGACTTCTCTAGCGAAAAATTCCCGCTTATTGCAAAGTCTCTGTGCGAGCAGAGTATCCGCGCACCAGTTGGGGCTCAAAAGTTCGAGTGTTCGAAGTGTTATCGAGCATTTCCATGTGCCAGTGCTGTTGAAATTCATGAGAAAGACTGTTCGACATCAGCTTTGAATCTATATGTAGAGAATCTACCCCAGCGAAAGCAAAGAGCTTACAGTGAAAGCTCAGCAAACGCGGACGATGATGACAATCGTCGTGAGGAGTTTTTTAATCGCCTTTACTTGACAAACAAATCCACAGCACAAAGTATGACAAGTTTGTCGGTATCATCACCATCCCTGTCTGATGTTAAGTCGTCCGAACTTGAAAAGACACCTGTGAAGAATGCCCAATTAGAACAATTCCAAGATACCAAAGAACTTGCTGACATCCAATCGATCCTCAATATAACTTCATCGTCGTCGACGAGTAATTTTCTTCGTAACTTTGAAAATTCTGTAAATGCGCCCATCAGTAATTATGGTGCTGAAAATGGCGAAGAAGAGGCTCAAGATGCTTTCACTTCAGAGTTTAGAAAAATGAAACTGCGTGGAGAATTTCCATGCAAGCTCTGCACAGCTGTGTTTCCTAATCTGCGAGCACTCAAAGGCCATAACAGAATACATCTTAGTGCCGCTGGTCCAGGGCCTTACCGTTGCAATATGTGCACATATTCAATCCATGATAAAGCAGCTCTCGTCCGACACATGCGCACCCACAACGGTGATCGGCCTTACGAGTGTGCCATTTGTAATTATGCATTCACAACAAAGGCCAATTGTGAAAGGCATTTACGAAACCGTCACGCAAAGACCACACGTGACGAGGTTAAGCGTGCCATTATTTACCATCCATCAGAAGACTCAAACTGTGACGATGCCATGAAGAAGTTGCACATGTTTTCTTCACCCGAATTCGATCAAGACGATATGGAACAACATCATCCGCCCAAAGATCGCTCAACTCCGGTTTCTCATCTGAAGGAAATGCTCCAAGCTGAATCTAAGCCAATGAAAATTCAAGTCAAGAGTCTTGAAAAACTGATTGATAAACCATCGTTCAACCAACCTGATGAACTCGAAAAGGAGCCAATAATTCCCGAACAAGAGAAAGAGATCAGCAGGCCAATTGACCTTAGCATGGATGCATTGGACTTAAGCAAAAAATCTGTAAAAATTGAAAAACTCGAAGAGAAAAGAGCTCAAACTCCTCCACCACAAGCGTTACGTTTAAATACCGCCCGTATTTTAACTGATGAGCCAAACATCGACATGCGATTATTGGAGAAAAATCAGCAGCTTTTGCTAGCCCAGCAAAGACTTTTGAATGAAGCCATGCCAAAAATGGATCCCGCACACTATTTTCAACTGTCGCAACTCTACAACAACTTGGTGTTCCAGCCACTCAATCCATTTTTACTACAGAATTCCTTTCTCTCGAACAACATCAGTGATTTGAATAAATTTGCTCCCATCGTGAATCCCCTTTATAGTGGAACACCTGTAGAGAGCCCGATTGTACGCAGTGAAAAACAAAACCAAACAAGTTCACTTCCGAAGTCAATTAAAGACGAAGGTCATGTATCGGTTAAGCAAGTTAACTCTCAAACTCAATCACCAGTGCCCGCTCAAAGCCAGCCATTGCCACGGAACCCAACACCGTCTTTATCGCAAATGCCAGCTTTGCCAAGAAGCCATCAACATCTCATGAGTGGGACTCACCCATCGGGAATGCTGCCATCATCTTTGCCCAGTTCAGGACCTGTTAAGATGGTCATCAAAAACGGAGTTCTTATGCCGAAACAAAAACAACGACGCTACCGCACTGAACGGCCGTTTGCCTGTGAACATTGCTCTGCACGGTTCACTTTGCGCTCCAACATGGAACGTCATATTAAGCAACAGCATCCCCAATATTGGGCTCAACGACAACGTAGTGGCCATCACATAATGCGTGGTCGTGCCAATAGTTCGTCATTACACTCCCACTTGCAATCAGCTCACTCCCCCTTGGAAGCACAACACCCAATTGGCCCTAGTGGCATGATGACAAATCCTTTGAGTGCCATTTCGGATCAAGTTAAATACGCTATACTTGCTCAACAGTTGAAAGCCCGCAAGGAGACTGATATTCTGCAACAAGCTCTGTCACAGGGATCCAGCAGTGTGCTCACACAGAACCCTGGATCTGGTATAAGCAGTATTCGCCAATCGCTCAGTGCATCATCGAATACAAACAATGGCAGCACTGAAGATGACGATCCCAAACTAGTTATTGACGAGGACGAAGACGAGCCAGAGGAAGAAGAAGACGATGACGAAGAAGAAGATTGTGAAGACCGAAAGCCGGATAACTTAACAAAATTTAATGATTTTCCAGAGCAAACAACAAATGAGGCTGCAAAGAAAGTTGCGGAATCTATCCTTGAGCAAGCAATGAAAGCTGGAAGTACTAAGATTTCGTACAACAACGACGAAGATCATGACCGAACAGTTAGTAAGGATTTCGGTCTCAAGTTATCGAAGAATATGATTGCTCAAGCCGAATCAGTAGGCAAATTTCTGAAAGAAGTCGCAAGCTCTCCATTTAAAGATGAGTCAAACGATTTGGCTTCAGTGTCTAGGTTAGTTGACAATGCAACCAACTCAATGTCATTTAACACCTATTTTCGACCCAGTGACGTAGTCAATCAAATGGAACAAAGTGATGAGGAAGGCCTTGTCGCATCAGGCAGTGCATCGGAGAGCAATAACTCTGGTCCAGAAGACATGGTCAGTTCCCAAGAGCCGAAGAAAAAATCAGCATACAGCTCAGCACCTAATCGTGTCTCCTGCCCCTATTGTCAGCGAATGTTCCCTTGGTCAAGTTCGTTACGAAGACACATTCTCACTCATACCGGCCAAAAACCATTTAAATGCTCACATTGCCCACTTCTCTTCACAACCAAAAGCAATTGCGACCGCCATCTGTTGCGCAAGCATGGAAACGTCGAATCCGCTGTCTCATTGTATGTTCCCATTGAGGATGTCAATGAACCTTTACCAATACCCAAATCTGTAGAGGAAATCGAACTGCAAAAGCAACAGCTTCTCCTGCAACAGAAACAACAAAAACGGTTAGAAGAGCTTAAAGAAATGGAAAGAATCCAACCAGCTCCAGTTCAAAAGCCAGTAGAAGAGAATTCCGAGCAGATACCAACTCCCAATACGAATTCGAATGCGAATTCAAACTCTACAAATGTCGTTCCTAAACTTGAACCAATTTCTTCCTGTCCAATGATTTCGTCTTCAGAGTTGCCATTCAAGTGTCATCTGTGTGACAGTTCATTTGCGGAAAGATTCCAATGCCTTGATCACATTAAAATTCATCACGCTCAAGAATTTTCACTTCTTCTGTCAAAGGGCGCCATAGACAATGATGCCGATGTTAACAGCCAAGTTCAGTCCACCGAAGATGATGAAAAACGCGACGAAAGTCGGGGCAAGTACCCAGACTACACCAATCGTAAAGTAATATGTGCTTTCTGTATGCGCCGCTTCTGGTCTACCGAGGACTTGCGTCGCCATATGAGAACACATTCTGGTGAACGACCATTTCAATGCGATATATGCCTCCGTAAATTCACCCTGAAGCACAGCATGTTGCGACACATGAAGAAACATAGCGGTGGCAGCCATTCCAGCAACGGAGCCGCCAACGCCGGCAACAGTGGATCTGATGCCTCCGATGATGAACAACCGCCATCAAGTGTTATGCTTGCCAATGCCCTACGCTCTCACAAAATCCAAGAGCTTTTCTCAAAAGTCAACAGTGAATGGCGCAATAATCGTATCTCGGGCGAGCACAAAGAGAATATCGAAGAGCACAACAACCAATCTGATCTTATTGGAAATTTGCTAGGAATCAGCGATCAAGGCATTCTCAACAAACTACTATCGTCAGCTGATGAAGCGGCCAAATTTCTTGGTGTCGAAAAGTAA
Protein Sequence: MLKTSIKKEITDMSLLKMERRQSTTSDSSVEPMDLGRSNSKLSTDMTDHSSTTLPTTKTTQIKDAILSDANTKYRYESDADESADDRDRDHQRRSHSQHHYHHRRRGNMVRDKRTVLLECTDSPHSLRKKFRFSSSNHNNNTTMPDAVINLKTKTSNNDTSIKSTTAPTNLTATTNNESGFVDASISHVLNTSGSSATSSTSSSSPTSSSSASPSASSNVASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGSSSNLLPVLPLTEPSPATQTSTAVSVLPPKTTTTTTTSVGNNGEVCNSNGDTIAGGGDGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNNNISNFKRKSTDSLDDLAIMKRRVKTTINNNNIIDSIHAIPEQSGIELPGVNDDKKQQQQHQQQKLFCPVCNRDDFGGMLALGDHMDSDHSDIPAKCRHCDVVFKTHRQLNLHPCTSKHKITQGFKDLTFVDFSSEKFPLIAKSLCEQSIRAPVGAQKFECSKCYRAFPCASAVEIHEKDCSTSALNLYVENLPQRKQRAYSESSANADDDDNRREEFFNRLYLTNKSTAQSMTSLSVSSPSLSDVKSSELEKTPVKNAQLEQFQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDELEKEPIIPEQEKEISRPIDLSMDALDLSKKSVKIEKLEEKRAQTPPPQALRLNTARILTDEPNIDMRLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLNPFLLQNSFLSNNISDLNKFAPIVNPLYSGTPVESPIVRSEKQNQTSSLPKSIKDEGHVSVKQVNSQTQSPVPAQSQPLPRNPTPSLSQMPALPRSHQHLMSGTHPSGMLPSSLPSSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSLHSHLQSAHSPLEAQHPIGPSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTQNPGSGISSIRQSLSASSNTNNGSTEDDDPKLVIDEDEDEPEEEEDDDEEEDCEDRKPDNLTKFNDFPEQTTNEAAKKVAESILEQAMKAGSTKISYNNDEDHDRTVSKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNSMSFNTYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPIPKSVEEIELQKQQLLLQQKQQKRLEELKEMERIQPAPVQKPVEENSEQIPTPNTNSNANSNSTNVVPKLEPISSCPMISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDNDADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGAANAGNSGSDASDDEQPPSSVMLANALRSHKIQELFSKVNSEWRNNRISGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -