Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000101.1:890423-903988[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.43 56 5.3 2.6 2 23 236 258 235 258 0.95

2 14 2.3e-05 0.003 18.8 2.8 1 23 291 313 291 313 0.99

3 14 0.00011 0.015 16.6 4.8 1 23 320 342 320 342 0.98

4 14 0.0018 0.23 12.8 3.6 3 23 351 372 349 372 0.96

5 14 0.7 90 4.6 1.5 2 23 381 403 380 403 0.95

6 14 0.0001 0.013 16.7 0.3 3 23 412 433 411 433 0.96

7 14 0.00019 0.024 15.9 3.4 1 23 689 711 689 712 0.96

8 14 4.6e-05 0.006 17.8 0.8 3 23 720 740 719 740 0.99

9 14 0.00031 0.04 15.2 1.4 2 23 748 770 747 770 0.96

10 14 0.37 48 5.5 2.1 2 23 1005 1027 1004 1027 0.95

11 14 9.9e-05 0.013 16.8 2.1 1 23 1059 1081 1059 1081 0.99

12 14 8.1e-05 0.011 17.0 3.3 1 23 1088 1110 1088 1110 0.98

13 14 0.00097 0.13 13.6 3.4 3 23 1119 1140 1117 1140 0.96

14 14 0.00023 0.03 15.6 1.5 2 23 1149 1171 1148 1171 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.43	56	5.3	2.6	2	23	236	258	235	258	0.95
2	14	2.3e-05	0.003	18.8	2.8	1	23	291	313	291	313	0.99
3	14	0.00011	0.015	16.6	4.8	1	23	320	342	320	342	0.98
4	14	0.0018	0.23	12.8	3.6	3	23	351	372	349	372	0.96
5	14	0.7	90	4.6	1.5	2	23	381	403	380	403	0.95
6	14	0.0001	0.013	16.7	0.3	3	23	412	433	411	433	0.96
7	14	0.00019	0.024	15.9	3.4	1	23	689	711	689	712	0.96
8	14	4.6e-05	0.006	17.8	0.8	3	23	720	740	719	740	0.99
9	14	0.00031	0.04	15.2	1.4	2	23	748	770	747	770	0.96
10	14	0.37	48	5.5	2.1	2	23	1005	1027	1004	1027	0.95
11	14	9.9e-05	0.013	16.8	2.1	1	23	1059	1081	1059	1081	0.99
12	14	8.1e-05	0.011	17.0	3.3	1	23	1088	1110	1088	1110	0.98
13	14	0.00097	0.13	13.6	3.4	3	23	1119	1140	1117	1140	0.96
14	14	0.00023	0.03	15.6	1.5	2	23	1149	1171	1148	1171	0.96

Sequence Information

Coding Sequence: ATGTTGTGCATACTATGTACTTTGTCATCAAATCAAATGTTAAACATATTCGATGAGAATGGCATGAATCTTAACATCAGTAAGATTATAACGAAGCACTTTTGGCTGCAGCCAAATGCAGAAATAAGCAATGCCAAGTCAATTTGCTGGTCGTGTTGGAAGACAGTTGAATCTTTTCATACCTTTTATACAACAATCGAAGAAGCCCACACTAAACTCGCGGCTTGTGTTAAACTCCCCGATAAGGAGAGTGACCATGAATCGACTGAATTCGAGGCTTTTACAGATTTGTTTTCAACAGTTGTTAAAGAAGAAAATTCTGAAGACTCAACCAAACTTGATTTGCCAGAAATCTTAGAAGCACCCCAAGCTTTTGATTACCCTGCCAAAAATTACGATGAAAAAGACATTCACAAATCCGAGTCTGAGTCAGAAAATCTTATCACCAATCCAAGTAACCGAAGTAGTTCATGGAAGGACGAGGATTATGAGGAGATCAATGACATTGCCTCAGACTCGGAGGAGGCATCAACGACCGTAGACAACGACAATCAACAATTAGACTGTGATTCCGATAGCGACAGTGATTACAATGCTCCCAAGAAAAAGGCTAAAGTGAAAGTTTCATCGACAACTAATGATCCAGGAAAAACTAAGATTCCCTGCAAAGAATTCGATAGCTTTATTAAAAAGAATATGGAACTCACATGTAGTTTATGCAACAAACCAGTCGATAACTTCTTCTGCCTTAAGGAGCATTTCAAAAAAGCCCACCAAAAAGCAGAGGCTTTTGTTACGTGTTGCGATAGGCAATGGACCAGTCGCTTTTCCCTAGTTCATCATTTGCTACTCCATCAAGACCCAGATTTATACAAGTGTAAAAAATGCGACCGAGTTTTGGCTAACAAGAGATCATTTAAAAACCATATGCAATCTCATGTGACCCAAGAACGCATTCATCAGTGTACGAAATGCAAGAAAAAGTTTTCGTCAATACCAAAATTGGAGAAACATTTAAAAACACACATCCGAATACACACCGATCAAATATGTGAACAATGTGGCAAAGTTTGTCATAGTAAACAGAGTTTAAGTGCCCACCAGAAACGGGAGCACATGGGATTTGTAAAGCAGCGAGTGCAGTGTATGAAGTGCGGAGCATATCTGTCGGACTCATCAACTTTACATTTTCACATGAAGTATCAACATCCAAAAACTAAAGAAGTCAATGCTTGTCATATTTGTGGGAAGATTTCGGCGACTGCTTACGGACTGAAGAGGCATATTCAATATATGCACACAATGGAGCGTGTCCATAAGTGCACAATCTGTGAGGACAAGGCTTTTAAAACAGCACAGATACTCAGGCCAAATGCAGAAGACATCAATGCCAAGTCCATTTGCTCCTCTTGTTGGAGTGCTCTGGAATCGTTTCATATATTTTATAAATCAGTGGAGGAGGCTCACAATAGACTTACATACCTTAAAACCGATAATGATGAGTCCTCCAATTACGAGAACTTTTCAGATTTGTTTACAACAGTTGTAAAGCAGGAACATTCTGAAGAGGGCGCATTCAATTTGCCAGAAATCAAATCAGTAGATTCTGCAGAAAGTAATGATAAGGAAAGGGATTTTCCAAGTTCTGACTCTGATTCTGAGGCAGATGTTCCGCTCACAGCATTAAGCGCTCACAAAAGTTCCATAAAGCAGAGCAAAAATGATGAAACCAGTGTCAAAGAGTCGGATATAGATGATAACGTCTCAAATGACGAAGAAAGCGACAGTGATTATGCGGCGGCTAAAAAAAAAGCGAAAGTAAAAGAAAAAGTAAAAAACTCGTATTGTGTTAACGTGCCTTGCAAGGAGTTCGACAATTTTATAAAGAAAAATATGCAACTTGCTTGTAATATTTGTGCCAAACCAGCAGAGACCTTTTTCAGCCTTAAAGAACATTGCCAAAAAGTCCACAAAACAGAAGCCTTTGCAACCTGTTGCGAACGGCAATGGACCAGTCGATTTTCCTTAGTGCATCATTTAATACTGCATCAAAATCCAGATCTATTCAAGTGTAAAAAATGCGGTCGAGTATTGGCTAACAAGAAGTCTTTCATACGTCACGAACAATCCCATCATACAGACCCACCAGTTCATGGGTGTTCCAAATGCAAAAAGGTGTTTCCATCCGTTGCAAAACTACAGAGGCACCTAAAAACACACACCAAGACAGACACCGATCAAGTATGTGAACAATGTGGCAAAGTTTACCACACCAAGCAGGCTATGAGAGCCCACCAAAAGCGAGAGCATTTAGTATCAAATGAAATGCTTAGTATATTTGATACAAACGGCATTAATCTAAACATAAGCGACATCATAACCAAGCACTTTTGGATGAAGCCAAATGCGGACGACAACAATTCGAACACTATTTGCTGCTCATGTTGGAAAACAGTAGACTCATTTCATAAATTTTATCAAACTATCGAAGATGCCCACACAAAGCTTACAACTTGTCTAAAACTCCCCATAGAAGAAAGTTATCCAGAATCGAATCACTTCGAGGTATTTTCTGACTTCTTTACACCAGTTGTCAAGCTAGAAAATTCTGAGGATACAAAAGTTGAGTTCCCAGAAACAGTTGAGATCCCATCAATACATCCCAACGATAAAGAAGCAAAGAATGACGAAATTCAAAAAGGAATCAATACGGATTCCGAGTCCGAAGTTCCTCTTGTCAAGCTTAGCAATCAGGCTAAGTCTGTAGAAGAGGAAAAAGAAGAAGAAGGAAACAGTGGCAATGAATCGGACTCGGATAACGATGCTTCAACCCAAGACAATGGCCACCAACAAGACTCTGAATCTGATAGTGGCTCCGAATCTGACAGTGATTACAATGCACCCAAAAAGAAAGCAAAGGTAAAAGATTCGTCAACATCTGCCGACGGGTCAAGTAAAAAACTTATGCCGTGTAAAGAATTTGATAGTTTTATCAAACAAAACATAAATTTGGAGTGCAATATCTGTAAAAAGCCAATTGAGAATTTCTTCTGTCTCAAGGAGCACTTCAAGAAAGCTCATAAGCAAACGGCGTATGTAACTTGCTGCAATAGGCAGTGGACTAGCCGCTTTTCTTTAGTCCATCACTTGCTGTTGCATAAAAATCCAGATTTGTACAAGTGTCAAAAATGTGGTCGCGTTTTGGCCAACAAAAAAAGCTTCAACAATCACACGCAATCGCATATTAATCAAGAACGTATTCACAAGTGCCCAAAATGTTCGAAGATGTTTTCTTCCATTGCCAAATTGGAAAAACACTCCAAAACACACATTAAACCGAGGATCGATCAAATATGTGAACAATGTGGCAAAGTTTGTCACAGCAAGCAAAGTCTCATGGCACATCAGAAGCGGGAGCATTTGGGGTTTGTAAAGCAACGAGTTCAATGTCCGAAGTGTGGCACTTATTTGTCCGATTCATCAACTTTACATACTCACATGAAGTATCAACATCCTAAGGTAATGCTAAAGAAATTTAATGGTGGAAGCCCAAATGCCGGGTACAATATCTATGATATTGAGTCTAAAACTAAACAACTTCGAACAACGCACTTCCAAACAAATATTCGCCACTAA
Protein Sequence: MLCILCTLSSNQMLNIFDENGMNLNISKIITKHFWLQPNAEISNAKSICWSCWKTVESFHTFYTTIEEAHTKLAACVKLPDKESDHESTEFEAFTDLFSTVVKEENSEDSTKLDLPEILEAPQAFDYPAKNYDEKDIHKSESESENLITNPSNRSSSWKDEDYEEINDIASDSEEASTTVDNDNQQLDCDSDSDSDYNAPKKKAKVKVSSTTNDPGKTKIPCKEFDSFIKKNMELTCSLCNKPVDNFFCLKEHFKKAHQKAEAFVTCCDRQWTSRFSLVHHLLLHQDPDLYKCKKCDRVLANKRSFKNHMQSHVTQERIHQCTKCKKKFSSIPKLEKHLKTHIRIHTDQICEQCGKVCHSKQSLSAHQKREHMGFVKQRVQCMKCGAYLSDSSTLHFHMKYQHPKTKEVNACHICGKISATAYGLKRHIQYMHTMERVHKCTICEDKAFKTAQILRPNAEDINAKSICSSCWSALESFHIFYKSVEEAHNRLTYLKTDNDESSNYENFSDLFTTVVKQEHSEEGAFNLPEIKSVDSAESNDKERDFPSSDSDSEADVPLTALSAHKSSIKQSKNDETSVKESDIDDNVSNDEESDSDYAAAKKKAKVKEKVKNSYCVNVPCKEFDNFIKKNMQLACNICAKPAETFFSLKEHCQKVHKTEAFATCCERQWTSRFSLVHHLILHQNPDLFKCKKCGRVLANKKSFIRHEQSHHTDPPVHGCSKCKKVFPSVAKLQRHLKTHTKTDTDQVCEQCGKVYHTKQAMRAHQKREHLVSNEMLSIFDTNGINLNISDIITKHFWMKPNADDNNSNTICCSCWKTVDSFHKFYQTIEDAHTKLTTCLKLPIEESYPESNHFEVFSDFFTPVVKLENSEDTKVEFPETVEIPSIHPNDKEAKNDEIQKGINTDSESEVPLVKLSNQAKSVEEEKEEEGNSGNESDSDNDASTQDNGHQQDSESDSGSESDSDYNAPKKKAKVKDSSTSADGSSKKLMPCKEFDSFIKQNINLECNICKKPIENFFCLKEHFKKAHKQTAYVTCCNRQWTSRFSLVHHLLLHKNPDLYKCQKCGRVLANKKSFNNHTQSHINQERIHKCPKCSKMFSSIAKLEKHSKTHIKPRIDQICEQCGKVCHSKQSLMAHQKREHLGFVKQRVQCPKCGTYLSDSSTLHTHMKYQHPKVMLKKFNGGSPNAGYNIYDIESKTKQLRTTHFQTNIRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -