Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000391.1:1753546-1765079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2 2.9e+02 3.1 2.1 2 23 259 278 258 278 0.88

2 14 0.016 2 9.8 1.8 1 23 284 307 284 307 0.93

3 14 4.1e-05 0.0054 17.9 0.7 3 23 316 337 314 337 0.95

4 14 0.37 48 5.5 0.1 3 23 345 366 344 366 0.90

5 14 1.6 2.1e+02 3.5 1.0 2 22 374 393 373 395 0.74

6 14 0.00064 0.082 14.2 3.0 1 23 407 429 407 429 0.98

7 14 0.067 8.6 7.9 0.2 1 23 435 458 435 458 0.91

8 14 0.0014 0.17 13.2 4.0 2 23 469 491 468 491 0.97

9 14 0.14 18 6.9 0.8 1 23 502 525 502 525 0.86

10 14 0.00029 0.038 15.3 3.5 1 23 532 555 532 555 0.97

11 14 1e-05 0.0013 19.9 1.0 1 23 561 583 561 583 0.97

12 14 6e-07 7.8e-05 23.7 0.1 3 23 590 610 588 610 0.97

13 14 0.00059 0.076 14.3 1.7 1 23 616 638 616 638 0.98

14 14 0.00095 0.12 13.7 0.2 2 23 644 665 644 665 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2	2.9e+02	3.1	2.1	2	23	259	278	258	278	0.88
2	14	0.016	2	9.8	1.8	1	23	284	307	284	307	0.93
3	14	4.1e-05	0.0054	17.9	0.7	3	23	316	337	314	337	0.95
4	14	0.37	48	5.5	0.1	3	23	345	366	344	366	0.90
5	14	1.6	2.1e+02	3.5	1.0	2	22	374	393	373	395	0.74
6	14	0.00064	0.082	14.2	3.0	1	23	407	429	407	429	0.98
7	14	0.067	8.6	7.9	0.2	1	23	435	458	435	458	0.91
8	14	0.0014	0.17	13.2	4.0	2	23	469	491	468	491	0.97
9	14	0.14	18	6.9	0.8	1	23	502	525	502	525	0.86
10	14	0.00029	0.038	15.3	3.5	1	23	532	555	532	555	0.97
11	14	1e-05	0.0013	19.9	1.0	1	23	561	583	561	583	0.97
12	14	6e-07	7.8e-05	23.7	0.1	3	23	590	610	588	610	0.97
13	14	0.00059	0.076	14.3	1.7	1	23	616	638	616	638	0.98
14	14	0.00095	0.12	13.7	0.2	2	23	644	665	644	665	0.95

Sequence Information

Coding Sequence: ATGGAATGTTCAACCATGTGTCGTGTGTGCATGCAAAACATATCCTTAGAGTATGTAGATTTAGATACTCCATTTCATGACACAACCTATTTTGAATGTTTCAACTACTGTACCAAATTGGAAGCTAAGGCTAGCGACAAGCTGCCTAAAAGTATTTGTGTTTCATGTGCTAACTTATTGCAAAACTCTTATGATTTTATTACTGCTGCTGCTGAGGCTGATCGTATGTTCCGGGAGTATATTGTCCAATTGGACGATAACTATGATGATACTAAATTCGAGGCTGAACATAAGACTGTAGCTAAGGAACTTCTAAATGTATCTGCTGAATTTGAAATAATTGTATTAGAAAATAAACCAACTATACATTTAGATCAAGAGAAATATGAAGAATCAATAGAAGATACAGGCACAATAAGGGATATATCACCAAAAGAAGAAATCGATGATATAATAAATGAAGAAGAAGATTATCGTGCGGAATTCGTTGATACCGAACAAGATTGGGAAATTAATATAGAAAATGCTCCTATTGCAGCTGAAGATCCTATATTCGAAGTAGTCGAATCAACTGAAGTTCGAAAACTAGAAAACAATGTATTGAAAATAATAGAAAAGAAACAAAAACAAATTAAACCAGCATTGAGGTATATTCTACCAAAAATTGAAACAGAAAACAATGAAGACGCCATCAATACTAAACTTGAAACTAAGGATATTCTTTCATTGAGTGGAAATTTAATACTCAATCAACAAAATGATACATCAATAAACAAGTGTGATATATGCAAGAAAAAGATTCGCAAAAACTTTTCTGATCATATGAATCAGCATACAGGTAATAGAGCATACAAGTGCGATAAATGTGACGATTCATTCTACACCCTTAAACAATATACTCTACACAAGGCGCAAGAACATAAAAGATTTAGGGATGCTTGGTTTTGCAATAAGTGCGGAGAAGCATTCGAAACTCGATCTAAGCTTATTAATCACCGAAATAATTACCATAATGAACAAACTTCAGGCTTATGTTTGGCGTGTGGTGAGAATTTATCTGACGAAGAAGCTTTACAACAACATGTTAAAGATAAACACTGGTCACGAAAACTACCAGTTGAATGTTCTCATTGTAAAAAGAAATACCAGCTAAATACACTCCCAATGCATGTTAAATATGCCCATTCAGATGTGGTATTTGCTGCGGTTGATAAAGTGTTCACTTGTAAATACTGTTTCAAAAATTGCGAGGACCCTATTCAGCTAGAGAAACATGTTAAAAACCATAAAGCAAAACATTTATACTCATGTGTGATTTGTGGGAACGATTTCAAGGGCAAAGCCGTTTTCGAAAAGCATAAAGCTGAAATGCATCCAATGCAGAATGTAAATTCAAAAATAAAAAAATGCAACAGATGCGACTTTACTACAACCCAGCAATCCTTATTGGTGAAGCATAGAAAGAAAAAGCATTACAACTATTACCACAATCGCATCCGAAAATTTCTTTGTGCATATTGTCCTAAAAAGTTTTTAACTTTAAAAACACTCAATGATCATGAAGATTATCAACATGGTGAACAAAAAACTGCCCACCAATGCGATTCGTGTGGTAAAAAGTTCGATACTAATTTTAAGTTACAACTGCATAAAAAGAGTGCACATGAAAATGAACGTCCATATATGTGTAAAGAATGCCCCAAAGCATTTAAACTAAAAAGTCAACTTCTCCAACATGAGAAGAACCATTATGAGAGGAAAATCAATTGCCCCTATTGTGATAAAAAATATGTACAACCCGCTTATCTGAGAGTACACCTGAGAACGCATACAAATGAGTTGCCATATGAGTGTCATTTATGTGACAAAAAATTTCCCATTAAAGGTCGGTTGACTTATCATTTGGCGAAGCACGAGGGTAGTGTGCGTAAGTGCGAATATTGCCCAGAGACGTTCGCTAATGTGGCAAAATTGAGAATTCATAGATTTGAACATATTGGATACCCATTAGTTTGTGATATATGCAAAGAAAATCATTATAAAAGAGAAAGGTAA
Protein Sequence: MECSTMCRVCMQNISLEYVDLDTPFHDTTYFECFNYCTKLEAKASDKLPKSICVSCANLLQNSYDFITAAAEADRMFREYIVQLDDNYDDTKFEAEHKTVAKELLNVSAEFEIIVLENKPTIHLDQEKYEESIEDTGTIRDISPKEEIDDIINEEEDYRAEFVDTEQDWEINIENAPIAAEDPIFEVVESTEVRKLENNVLKIIEKKQKQIKPALRYILPKIETENNEDAINTKLETKDILSLSGNLILNQQNDTSINKCDICKKKIRKNFSDHMNQHTGNRAYKCDKCDDSFYTLKQYTLHKAQEHKRFRDAWFCNKCGEAFETRSKLINHRNNYHNEQTSGLCLACGENLSDEEALQQHVKDKHWSRKLPVECSHCKKKYQLNTLPMHVKYAHSDVVFAAVDKVFTCKYCFKNCEDPIQLEKHVKNHKAKHLYSCVICGNDFKGKAVFEKHKAEMHPMQNVNSKIKKCNRCDFTTTQQSLLVKHRKKKHYNYYHNRIRKFLCAYCPKKFLTLKTLNDHEDYQHGEQKTAHQCDSCGKKFDTNFKLQLHKKSAHENERPYMCKECPKAFKLKSQLLQHEKNHYERKINCPYCDKKYVQPAYLRVHLRTHTNELPYECHLCDKKFPIKGRLTYHLAKHEGSVRKCEYCPETFANVAKLRIHRFEHIGYPLVCDICKENHYKRER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -