Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000032.1:562370-564728[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.24 31 6.1 5.2 1 21 236 258 236 260 0.95

2 11 3.3e-06 0.00043 21.4 0.7 1 23 266 288 266 288 0.99

3 11 0.00019 0.025 15.8 1.4 1 23 294 317 294 317 0.97

4 11 0.077 10 7.7 4.4 1 21 323 343 323 345 0.95

5 11 3.8e-05 0.0049 18.1 3.0 1 23 351 373 351 373 0.99

6 11 0.00017 0.022 16.0 2.9 1 23 379 401 379 401 0.98

7 11 0.00022 0.029 15.6 3.7 1 23 409 432 409 432 0.98

8 11 0.17 22 6.6 7.3 2 23 439 460 438 460 0.95

9 11 0.0023 0.29 12.5 0.5 1 23 466 488 466 488 0.98

10 11 6.6e-06 0.00085 20.5 4.6 1 23 494 517 494 517 0.96

11 11 3.1e-08 4e-06 27.8 1.5 1 23 531 553 531 553 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.24	31	6.1	5.2	1	21	236	258	236	260	0.95
2	11	3.3e-06	0.00043	21.4	0.7	1	23	266	288	266	288	0.99
3	11	0.00019	0.025	15.8	1.4	1	23	294	317	294	317	0.97
4	11	0.077	10	7.7	4.4	1	21	323	343	323	345	0.95
5	11	3.8e-05	0.0049	18.1	3.0	1	23	351	373	351	373	0.99
6	11	0.00017	0.022	16.0	2.9	1	23	379	401	379	401	0.98
7	11	0.00022	0.029	15.6	3.7	1	23	409	432	409	432	0.98
8	11	0.17	22	6.6	7.3	2	23	439	460	438	460	0.95
9	11	0.0023	0.29	12.5	0.5	1	23	466	488	466	488	0.98
10	11	6.6e-06	0.00085	20.5	4.6	1	23	494	517	494	517	0.96
11	11	3.1e-08	4e-06	27.8	1.5	1	23	531	553	531	553	0.97

Sequence Information

Coding Sequence: ATGTCTCGAATTGCAAATAATATTCAAATAAAAATCGAGACAAATGAGCTTCAAACATACCTCGATACTTTTAACAAAGAAATAGAAGAAGGCAGTCGAAGTTTGAGTAGTAGTTTTGTAGATGCTGCAGATTTATTAAATGCTCATTCCAAAAACGACGACGACGAAACCGGAACATACTTTGTTGATGAAGCCGGAAACTATTATTATCAGGCGACCAAAGATGCAGAACCAATACCAACGGATCCACCTGAAAATGCTCACATCGTTGCAGAGGACAGTGATATAGAGGAAATAACATTAGCGAAAATACCAAAAACCGCACAAACAAAACATCGCAAAAATGCATCATCATCCTTTAGTAGGAATGCGTCGAAAAGGGCAAAAATCAGCGATGATAACAATGATGGGGATGTTGATTATATTCAATTATCTTATGCACTTGGAGATGAGAACGATGTAGAAGTTGATGATATGAATGAGAATGAAGATGTTACCAATAATGGGGAAGAGGTTGAACAAGACGATGAAGAGAATGAGAACGAAGGTGAGGATGAAGATGAAGACGACGAAGATGGTGATGGAGATAGTGATGAGAAAGAAGAAGTTTTCGAATTTGATGAAAATGAAGAAAGCAGCGAGAAACGCTCAAACTTCCCAACAAAAGTTGTATGTCTAAAGCCGAAAAACTCCAAGTCCACATCACACCAGTGTCCCCATTCCAACTGTGAATATGTGTCCTCAAAACGATATTTGTTAGCTCGTCATATGAAATGCCATTCGGACTACCGACCCTTTAAGTGTTCAGTTTGTGAGCGTGGATTCAAGACAAATGCTTCTCTTCAAAACCACGCCAACACGCACACCGGCAACAAACCATACCAATGTAAGTTTTGTGCCAGCACTTTTACCACCTCTGGAGAACTAGTGCGGCATGTTCGCTACAAGCATACCCATGAAAAACCGCACAAATGCTTCGAATGTAACTATGCTAGTGTGGAACTTAGCAAACTTAAGCGCCACATTCGATGTCACACTGGAGAACGGCCTTTCCAATGCCCACACTGTACCTATGCGTCTCCGGACACTTTCAAGCTGAAACGCCACATGCGGACGCATACTGGAGAGAAGCCATATGAATGTGATATTTGCCATTCCAAATTCACTCAGTCCAATTCCCTCAAACAGCACAAGCTAATTCATAGCGTTGGCGATAAACCCGTTTTTCAGTGCCACCTCTGCCCAACGACTTGCGGCCGAAAGACTGACTTAAGAATACACATCCAAAAGTTGCACACCTCTGATCGTCCGCTGACTTGTAAGCGATGTAATAAGTCCTGTCCAGATCGGTATTCATACAAGGTGCATTGTAAGACCCACGACGGGGAAAAGTGCTTCAAATGCGATCTATGTCCCTACGCTTCTATATCTCAGCGGCATTTGGACTCTCATCTGCTGATTCACACCGATCAAAAGCCGTTTGAGTGTAAGCTCTGCGGTCAGTGTTTCAGACAAAAACAGCTCCTTAGACGTCACCAAAATCTCTACCACAATAAGGACTACGTTCCACCACCACCTCAAGAAAAAACCCACTCGTGTCCCGACTGTAAGCGTGCATTTAGTAGGAAAGGAAATCTCATGAGACACATGGCTACTCATGATCCCGACTCAGTGGTACATGAAGTTAAAGTAGAGAAGCAGGTTAGTGCAGGGAAACAGATGGAAAACGATGAAGGGACATTTGAAGCTCTTAGCTATGTTGAGGAGGAAGAGGAGGACTATGAAGTCGAAGAGGAAGAAGAACAAATGGAAGGAGATGAAGAGGCAATGGAGACTTATATAGAAACTGCAGCATCAGATATAACAAATTTCGAAGAGGTGATGATTAAGAAGGAGGATGAAAGGGAACTTGTTACGCTTGAAGGCATCGACGATCAGCAGTACATGGTGGTGGAAATAATTCAAAGCGATGATGAAAACGATGATCTAGGCTTCGACGAAGACAAAGCAATAAAACATGAGTTGGATGAAGAGTTTGTTATTTCAGAACTTACTGAAGGAGGAATCAATATTATCAAGGGAACAAAAAATCAAGCCGTTGAAATGGATGACTGTTTTGGATTCAGTGAATCTGAAGAATTGTTAGACGAGTCTATACGAAGTGATTCAGATGTGCAAGACGATTGCAAAAACGATATTAAGTTGTTGGAAATCTTACAATAA
Protein Sequence: MSRIANNIQIKIETNELQTYLDTFNKEIEEGSRSLSSSFVDAADLLNAHSKNDDDETGTYFVDEAGNYYYQATKDAEPIPTDPPENAHIVAEDSDIEEITLAKIPKTAQTKHRKNASSSFSRNASKRAKISDDNNDGDVDYIQLSYALGDENDVEVDDMNENEDVTNNGEEVEQDDEENENEGEDEDEDDEDGDGDSDEKEEVFEFDENEESSEKRSNFPTKVVCLKPKNSKSTSHQCPHSNCEYVSSKRYLLARHMKCHSDYRPFKCSVCERGFKTNASLQNHANTHTGNKPYQCKFCASTFTTSGELVRHVRYKHTHEKPHKCFECNYASVELSKLKRHIRCHTGERPFQCPHCTYASPDTFKLKRHMRTHTGEKPYECDICHSKFTQSNSLKQHKLIHSVGDKPVFQCHLCPTTCGRKTDLRIHIQKLHTSDRPLTCKRCNKSCPDRYSYKVHCKTHDGEKCFKCDLCPYASISQRHLDSHLLIHTDQKPFECKLCGQCFRQKQLLRRHQNLYHNKDYVPPPPQEKTHSCPDCKRAFSRKGNLMRHMATHDPDSVVHEVKVEKQVSAGKQMENDEGTFEALSYVEEEEEDYEVEEEEEQMEGDEEAMETYIETAASDITNFEEVMIKKEDERELVTLEGIDDQQYMVVEIIQSDDENDDLGFDEDKAIKHELDEEFVISELTEGGINIIKGTKNQAVEMDDCFGFSESEELLDESIRSDSDVQDDCKNDIKLLEILQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01318470;
90% Identity: iTF_00694914;
80% Identity: -