Ecor009313.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000101.1:855868-887267[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 1.2 1.6e+02 3.9 0.7 2 23 427 449 426 449 0.94 2 29 0.86 1.1e+02 4.4 0.0 6 23 460 477 460 477 0.98 3 29 0.069 8.9 7.8 0.7 1 23 483 505 483 505 0.95 4 29 9.1e-06 0.0012 20.0 1.7 1 23 511 533 511 533 0.97 5 29 0.0015 0.19 13.1 0.9 2 22 542 562 541 564 0.89 6 29 0.00055 0.071 14.4 1.2 2 23 572 593 571 593 0.94 7 29 0.00012 0.016 16.5 0.3 1 23 601 624 601 624 0.97 8 29 0.23 30 6.1 4.6 1 23 631 654 631 654 0.91 9 29 0.074 9.6 7.7 0.2 1 13 660 672 660 676 0.90 10 29 0.004 0.52 11.7 1.3 1 23 946 968 946 968 0.98 11 29 0.00034 0.044 15.1 6.2 1 23 974 996 974 996 0.97 12 29 0.0033 0.43 11.9 1.2 1 23 1002 1025 1002 1025 0.91 13 29 1.2 1.5e+02 3.9 0.5 2 23 1233 1255 1232 1255 0.91 14 29 3.9 5.1e+02 2.3 0.2 6 23 1264 1281 1264 1281 0.96 15 29 0.00016 0.021 16.1 0.4 1 23 1287 1309 1287 1309 0.98 16 29 2.4e-06 0.00032 21.8 2.5 1 23 1315 1337 1315 1337 0.99 17 29 0.00034 0.045 15.1 0.6 1 23 1343 1366 1343 1366 0.93 18 29 0.0014 0.18 13.1 0.4 3 23 1374 1394 1373 1394 0.97 19 29 0.00022 0.028 15.7 0.2 2 23 1403 1425 1402 1425 0.96 20 29 0.033 4.2 8.8 0.5 1 23 1432 1455 1432 1455 0.91 21 29 0.024 3.1 9.3 0.2 1 16 1461 1476 1461 1477 0.87 22 29 1 1.4e+02 4.1 0.3 2 23 1679 1701 1678 1701 0.91 23 29 0.091 12 7.4 1.5 1 23 1733 1755 1733 1755 0.97 24 29 0.00012 0.016 16.5 1.1 1 23 1761 1784 1761 1784 0.93 25 29 0.00031 0.04 15.2 1.6 1 23 1790 1813 1790 1813 0.93 26 29 0.00087 0.11 13.8 2.0 3 23 1821 1841 1820 1841 0.97 27 29 0.00041 0.054 14.8 3.1 1 23 1849 1872 1849 1872 0.97 28 29 0.011 1.5 10.3 0.5 1 23 1879 1902 1879 1902 0.90 29 29 0.011 1.4 10.3 0.3 1 17 1908 1924 1908 1925 0.93
Sequence Information
- Coding Sequence
- ATGGAAGAAAAGACGAAAGGTGTGACGTCAGAGCACGAAACATCGGAGAGTGACGACTCTGGAAGCCCAGATTACGTCTCAGAGGGTGGAGAAGGGCAGTTTAGGTCACCGAAATATAGGAACAAGATCCTATCGGAGCCAGAACCGCCAACAAATAAATCGTTGGAGGGGGAGGTGGACCAAATCCTCCAAGAAGAGAATCAACTGATGGAGGCACTGCAAACTAAACAGGCTGCCATCAGTAAATTTGAAGAAAGCCTAAAAAAACTAAAGGAGGAAATAGAGCCACTCCTCAGTCAACTTAAGCTTAAGCAGGAAGCGCGCCGGCAGCAAGTGGCAGCgcaacgccaactgcaacaaaaacaacaaccacagcagcaaaaacaaccaccacccaagcccgctcccaaaaacacaggagcggagcaaaataaaaagaagccagcagcagcgacaggcccaattgctgagggcccatcgacgtcggctaaggccaaacagcagcaacaacaacagctaaaacaacagcagcagaaacagcagcagcagcaaccgaaacagcagcagccgaaacagcagcagccgaaacagcagcagcaaaaacagcagcagcaacaccagaaacaaccacagcccaaggagaaggtgccaccaattagaacctatcaggttgacctgcaggacttgaaacagCCATGCGCTGAAGATTCCTATGCTAATGTTATATGTTCCTCATGTTGGAGTTCTCTGGATTCATTTCATAAGTTTTATAAAGACGTTGAAGCAGCACACAAGCTTCTTCAACTCAATCCAAACAATTCAAAAGAAAACAATAAACCAAAAGAATCCACCTCAGCAGGTAACGATTTAAATGAATATAACAACTTTTTGACCACAGGAATAAAGATTGAGGTCAATGAAGACTCCAACGATCAACCTTTAGAGTTTAACCAAAGTGATATGTCCACTGATCCTCTAAAAACAAAAGAAGAACCCAATGAAGATATGTGCGAAAATATAAAATATGACTCTGAGTCGGAAATTCCGATTTCTCAGCTTTCTACATATTGCAAACTAAACCAAGAAAACCAAAGTAAGGAGGGCAAAAGTCCAACAACTAAACATAGATTCATTAAATATAAAAATATCAAACCAGGAGAAGATGTATTCCACATCAAAGACGGAGTATGGCTTGCCGATTGCTATAGCGAAGAAACTACCGACAAAAGAATCAGTCACGAAGAGTTCGACAAATTTATCAAATTAAATTTTGAACTCTCATGTGATTTATGCCTCAAGTCCATGACAAATTTCACAGCTCTCCAAACACACTTCCAAAGCGAACATGATGCCGCCGGCAAAGCCTACGTTATCTGCTGTGATAAGAAATTCTACCTGCGTGCTGCTCTAGTTGATCATATTCTGCTGCACAAGTTACCTAATTACTTCACTTGTATTCTCTGCTCGAAAGTCCTGACAGGCCGCAAAACCCTTATCGAACATCAGAAGACACATAACAAGAGACTGGTCTATCAATGTCCAGGCTGTGACAAAAGCTTTCATAGGAAAATAAATCTTGATCGACACAAAGATGTCCATGTTGATTACTCAGAACGTACTGTTGAGTGCGATCATTGCGACAAGCTGTTTGCTTCAAAATTTTCACTTAAACAACATGTTTACGATGCCCATAAAATTGGTGGGACTAATATAGTGTGTGAATTGTGTGGCAAAGTTTGTCGTGACCAACCGACTTTTCGACGTCATCAATTCGAACATACAAATGCGGAGAAAGAATATTTCCCTTGTGAAATATGCGGCACTAGGCTAGCGACCAAAGATGGCTTACGGCGACATAAGAAATCCCAACATCCGAAAGATGATAAGAAACATTTTTGTAGTTATTGCGGTCTACAGTCGACGACAGCTCATGCATTGCATCGTCATGTTACCTACATGCATACTGGCGAAGCCCGGTATAAGTGTACATTGTGTGAAAAAGCGTTTAAGAGAGCTCTCAGACTTAAGCCCAATCAAGAGGATAACAATTCCAAATGTATCTGCTCTACTTGTTGGATACCGGTTGATGCATTTCATAAATTCTACGAACAAATAAAAGAAGCTCATTGTTCATTTCAAGAAATTAAACCTGTGGTGACAGAAGATGATTTTCAAGAAGCAGGAGCACTGTCCAATGATAACCACTTCAGTGACAACAACATGTACTTGGATGAAGATATCAAAGTTGAAGACTACGAAATAACTAATTTTCCAATGGAACTAGAATGTCATGTAAATCCTTTAGAAATATCGCTTAAAAGTGATGAAAAAGATGTGAATATTAAGTCCGACTCAGAGTCGGAAATGCCACTATCTGAATTATCCAAACAACTTCATAGAAAGGATAAAACGTTGAGGAAAAGCAAAACGAAAGATAGAACTTCTAATTGCAACAGCGAATCACCGAAGAAGATTCGACAAAAAGTTAAGAGTCCAAAGAAGACAAACTCCGAACGGCCTGAAATTAGTTCCGAAAGCAAAGACCTCATTGAAGAAAAACTTCATATCCACGAAGGAAAATGGCTTGCTACTTGTTACGCGGAGGAAACTTATTCGAAACCAATTAGCTCTGAAGAGTTAGACAAATACTTAAAATTGAATATAGAACTTTTGTGTGGAATTTGTCAAATACCAATAGACGAATTCGCATCTCTTCATCCCCATTTCGTAAGGTATCATAATAATATGAAACCCTTTGTATCTTGTTGTGGCAGAAAACTTAAATATCGTGCTCATATAATCGATCATAATCTAGTGCACAAAATACCTGAATATTTTAAGTGTCACATATGTTCCAAAATTTGGCCATCGCGTCGAAACCTCAAAGAACATTTATCAATACACAATAAGAGCTTCATCTACCACTGTGACAAATGCAACAAGAGTTTTTGTAGTAAACCCGCTCTGGAGCGACATCATGAAGTACACTTCGTTGAAAAACCATTTAAATGTGATGTTTGTGATAAGTTCTATGCAACAGAATATCGACTAAAACAACACGCCTATAATATGCATCAGTATAAGAAAATTTGTGAACAATGTGGACAACCAAATGAAGACGACGACTCAAGTTCCAATACGATATGTTCCAATTGCTGGACATCATTATCAGAATTTCATAAATTCTATGAAGAAATCAAAGCAGCTCATTGCGCGCTTTTGGAAATCAAATCAGCAAATGATGATGATGAGGATCTGGAAGTGGAGGCAAGTTCAGGTGAACAGCATTTAGAAGAAGATTATAACAGTATCTTGTATCAAGCAATTAAAATTGAATTGAAAGAGGAAACTACTCACAATGAAAGAACAGAACTTGACGCCTCTGCTGAAAGCATAAAATGTCCCATAGAAGAAGATCTAAAATACGACCAAGATGAAGTTGATAAAGAAGAGGACTTGGAAGGCTCAGACTCAGAAATACCACTCTCAAAGTTAACCAAACGAAGTAAAGTTGAAAAGGAGAGCGATAGTAACTTTAACTCGCACTCAGAAAGCCAAACCAAAGACACCGACGAAGACCGAAAGGTTCACATTCAAGATGGAAAATGGCTTGCGACTTGCTTTGGTGAGGAAACCACAGACAAGCCGATAAGTCACAAAGAGTTGGATAAGTTTATAAAACTTAATTTTGAACTTACATGTGAAATGTGTCGAATACCAATGAAAGACTTCTCAGCCCTCCAAAAACACTTCAAAGATACCCACAGTACAAAGACTTTTGTGACTTGTTGTGTTAAAAAGTTCTCTCTACGAAGTCGTTTAGTTGATCATATTTTGCTGCATAAGCTACCTGCCTACTTTACATGCGTAATTTGTTCTAAGCTATTGTCGTCGCGAGAAAACCTTAGGAAGCACATGATTGTGCACGATAAAAAATATGACTTTCAGTGCGAAAAGTGCGATAAGACTTTCTACCGTAAACAACTTTTGGACCGTCACATGGATACCCATGTATTGGATAGAAAATTCAAATGCGACATATGTGATAAACTCTTTACGTCGAAATTTTCTCTGGGACAACACATTTATGGAGTGCATAAGGGTGGTTATAAGAAAATTTGTGAGCAATGTGGTAAAGTTTCTCGTGACCACGAAGCTTTTGTGCGTCATCAATTGGTACACACAAATCAACCAAAACCATTTGTTGAATGTCCCAAATGTGGCATCAAGCTTGTTGACAAAAATGGCTTGCGCAAACATATGCAATCGCAGCATCCTGATGAAACACGTGAACACATTTGCACTGAATGCGGAATTATAACTAATACAATATTTGCATTGCGAaggcacattacttttatgcacaagaaaaatcgtgaccataagtgtccggtgtgtgaaaaagcttttaagagagctcttactttaaagCCAAGTGAGGATGATGTTAATTTCAACTTAATATGCTCGTTATGTTGGAAAGCATTACAATCCTTTCACAAATTCTACAAAGAAATCGAAAAAGCCCATCGCTTGTATAACAAATACACCACTTCAAATGAACATGACTTCGAAAGTGGCGGTGGAGATGGAGGCGGATTGAATGATTGCCTTTTGGATAAAAATGATGATGACCTTCTGTATCCAGGCATTAAAATTGAGCTCAATGAAGAATCTAGTCTTAAAACGTTGGAAATTGATCCACATCCTGTCGAAGAAAATATTAAAAGTCCTCTTGAATTTGATTTTAAATCAGACCAGAATGAATTTGGAGGAGATGAAATGGAACCAGAGGACTCTGATTCAGAAATTCCCCTATCAAAGTTGACCGTTCAACTACAACGTAAGGAGGATAGTTTAGAAAGCATATCAAGTGCCAAGGCCCTAAAGAAAGATGAACACAAAACGACGAAGGAAGGAAAAGTGCACATCCAAGAAGGAAAATGGCTAGCAAATTGTTTTGGCGAGGAAACAGTTACGAAGCCGATAAGTCATCAGGAGTTGGATAAGTTTATCAAATTGAATACCCAACTAACTTGCGAGATATGCCGCATTCCGATGGAAGATTTCTCAAACCTCCAGACACACTTCAAAGATAGCCACACTGTAAAACCCTTTGTGACTTGTTGTGACAAAAAATTCGAACTTCGGTGTCGCCTGGTCGACCATATTTTGTTGCACAAGCTACCCAACTATTTCACATGTGTTGTCTGCTCTAAGGTACTATCGTGTCGGCTCAATTTGAGAAAACACATGGTCGTCCATGACAAAAAAGAGGCTTTCCAATGTGATCAGTGCGATAAGACTTTCTACAGAAAAGAGGTATTCAACCGTCATGTCTTAGATATACACACTTTAGAACGAAAATTCAAATGTGAGGAATGTGATAAACTATTTGCGTCGAAGTGTTCCTTGAACACACATATCTATGGAGTCCATAAGGGTCGATATAAGAAAATATGCGAGCAGTGCGGCAAAGTGTCTTGTGATCAAGAGACTTTCCTTCGTCACCAAATGAAACATTCAAATGAACCACAAACGTATTTCCCATGTCCAAAATGTGGTGTTAAACTTTCAACGAAACATGGGCTACGCCATCACCTTAGATATCAACATTCGGAAGATACTCGGGAACATGTTTGCAATGTTTGTGGAAACATATCAACAAGTGAATCAGCGCTAAAAAGGCATGTAACGTTTATGCACAAGTATAAACGTGATTTCAAGTGTACATTGTGTGAAAAAGCCTTCAAGAGAGCTGTCACCTTAAAGTGGGATAAACATTGGGAGGCAAATAGGTACATAACGAAGCTCTCAGGCAGCATATAG
- Protein Sequence
- MEEKTKGVTSEHETSESDDSGSPDYVSEGGEGQFRSPKYRNKILSEPEPPTNKSLEGEVDQILQEENQLMEALQTKQAAISKFEESLKKLKEEIEPLLSQLKLKQEARRQQVAAQRQLQQKQQPQQQKQPPPKPAPKNTGAEQNKKKPAAATGPIAEGPSTSAKAKQQQQQQLKQQQQKQQQQQPKQQQPKQQQPKQQQQKQQQQHQKQPQPKEKVPPIRTYQVDLQDLKQPCAEDSYANVICSSCWSSLDSFHKFYKDVEAAHKLLQLNPNNSKENNKPKESTSAGNDLNEYNNFLTTGIKIEVNEDSNDQPLEFNQSDMSTDPLKTKEEPNEDMCENIKYDSESEIPISQLSTYCKLNQENQSKEGKSPTTKHRFIKYKNIKPGEDVFHIKDGVWLADCYSEETTDKRISHEEFDKFIKLNFELSCDLCLKSMTNFTALQTHFQSEHDAAGKAYVICCDKKFYLRAALVDHILLHKLPNYFTCILCSKVLTGRKTLIEHQKTHNKRLVYQCPGCDKSFHRKINLDRHKDVHVDYSERTVECDHCDKLFASKFSLKQHVYDAHKIGGTNIVCELCGKVCRDQPTFRRHQFEHTNAEKEYFPCEICGTRLATKDGLRRHKKSQHPKDDKKHFCSYCGLQSTTAHALHRHVTYMHTGEARYKCTLCEKAFKRALRLKPNQEDNNSKCICSTCWIPVDAFHKFYEQIKEAHCSFQEIKPVVTEDDFQEAGALSNDNHFSDNNMYLDEDIKVEDYEITNFPMELECHVNPLEISLKSDEKDVNIKSDSESEMPLSELSKQLHRKDKTLRKSKTKDRTSNCNSESPKKIRQKVKSPKKTNSERPEISSESKDLIEEKLHIHEGKWLATCYAEETYSKPISSEELDKYLKLNIELLCGICQIPIDEFASLHPHFVRYHNNMKPFVSCCGRKLKYRAHIIDHNLVHKIPEYFKCHICSKIWPSRRNLKEHLSIHNKSFIYHCDKCNKSFCSKPALERHHEVHFVEKPFKCDVCDKFYATEYRLKQHAYNMHQYKKICEQCGQPNEDDDSSSNTICSNCWTSLSEFHKFYEEIKAAHCALLEIKSANDDDEDLEVEASSGEQHLEEDYNSILYQAIKIELKEETTHNERTELDASAESIKCPIEEDLKYDQDEVDKEEDLEGSDSEIPLSKLTKRSKVEKESDSNFNSHSESQTKDTDEDRKVHIQDGKWLATCFGEETTDKPISHKELDKFIKLNFELTCEMCRIPMKDFSALQKHFKDTHSTKTFVTCCVKKFSLRSRLVDHILLHKLPAYFTCVICSKLLSSRENLRKHMIVHDKKYDFQCEKCDKTFYRKQLLDRHMDTHVLDRKFKCDICDKLFTSKFSLGQHIYGVHKGGYKKICEQCGKVSRDHEAFVRHQLVHTNQPKPFVECPKCGIKLVDKNGLRKHMQSQHPDETREHICTECGIITNTIFALRRHITFMHKKNRDHKCPVCEKAFKRALTLKPSEDDVNFNLICSLCWKALQSFHKFYKEIEKAHRLYNKYTTSNEHDFESGGGDGGGLNDCLLDKNDDDLLYPGIKIELNEESSLKTLEIDPHPVEENIKSPLEFDFKSDQNEFGGDEMEPEDSDSEIPLSKLTVQLQRKEDSLESISSAKALKKDEHKTTKEGKVHIQEGKWLANCFGEETVTKPISHQELDKFIKLNTQLTCEICRIPMEDFSNLQTHFKDSHTVKPFVTCCDKKFELRCRLVDHILLHKLPNYFTCVVCSKVLSCRLNLRKHMVVHDKKEAFQCDQCDKTFYRKEVFNRHVLDIHTLERKFKCEECDKLFASKCSLNTHIYGVHKGRYKKICEQCGKVSCDQETFLRHQMKHSNEPQTYFPCPKCGVKLSTKHGLRHHLRYQHSEDTREHVCNVCGNISTSESALKRHVTFMHKYKRDFKCTLCEKAFKRAVTLKWDKHWEANRYITKLSGSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -