Ecor031739.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010003669.1:1025168-1028285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-08 3.3e-05 24.3 0.0 4 39 25 60 23 65 0.90 2 2 9.3 3.9e+03 -1.5 0.1 12 22 125 136 124 137 0.76
Sequence Information
- Coding Sequence
- ATGCAAATTATTCTTCAAGAACACGCTAGATATTACGCGAACAAAGGACTTCGAGCGACATGGAATCAGAATGAACTACTTGCGGCCTTGAACGACGTAAAACAAAATACATTATCCATTAATGCGGCTGCAAAGTTACATAAGATTCCAGCAACTACTCTTAGAAGAAGACTCAAGAACGAAAGTGACAAAAAGTCGAGCTTAGGTGCTCCGACAAACCTGGGAGTACAAAATGAGCAGAAAAGAAGTTGCGGCGTATGGCCTTTGAACTTGCTGAAAAATACAAGGCAAAGCAACAATTTTAATAGAGCTAAAAAATTGACTGGAGTTGGATGGCTTCAGCTTTTTTTACATCACCATCCGGAACTCTCTGTGCGTAAGTCCGAAGGCGTATCAATTTCACGTGCAAATGGTATGGAAAAGGAAGAAGTTTCCAAGTATTTTAAATTGTTGAAGGAGACATCAATATGTCATGCAATAGTTGACAAACCTGGCAACCTTTTTAACGTGGATGAAACTGGCTGCCAGTTAAACAACAGACCGGAGTATTGCAACGCAAAGGGAAGTTTCCTTCCACCAGCATCTGTTTTCACGGGAATAAGGAAGAAATTGGAATGGGAAGATAGGATGCCTCCAGGATTGCAGTTCGGCAAGCTTTTGTCAAGTGCTTCTGAAAAAGCAGCTACATCAGAAAATGGCATTTCCGGGTTTAGTTCGACAGGTATTTTCACATTTAATCCAGAAATAATACCCGAATACGCTTACATTAATCACCATTGTGAGGACCAACCAGCCGTTCCCATTATAGCTCCAGTTACTTCACCTACATTACAAGATAGTACGGCTGCAAGCACAAGTCAGGAAGCGCAAGTTGCTAGTGATATTACACCTGGAAAGATGGCATTATCTAAAATTCCAAATACTAAAGTGTCGCAGTTTGAGATAATGGTCAATTATATGACCCAGCACCCAGAGTTGTCCAAGGGTTATTTAAAAACACCCGAAGCCAGACAAAAATCAAAGCATTTATGGACCAATCTGTCAAACGATTTGAACGCTAAAGGTCCACCTCAGCGTGATGCGGAGGGATGGAATAGGGTCTGGGCCGATTTTAAGGTTCGTACCAAAGCCCAGCTAAGAAAAAAAAAAATTAATTTGTCCGGAACTGGTGGTGGTCCCCCGAAACATCATTCACTTACTCCACTAGAAGAGAAAGTCAGTGAGTTGCTTGACTTAGGTGAAGCAATCGATGGGATGAATGGATCCCTTAGTTTCGGGTTGCAAGACACCAGTATGAGCTGCAGTCGTCAAGACCATGAAGAAGATGAAGATGTCTCGGAAATGTTTGAGGTTATTGCTAAAACGGAAACAAATATTAACGACAACATTAGCGAAAAGGAAGACAGTTACTCCTCGAAAAGCAAGTTGAGCATCAATACTTTACCAAACCAATTCCACCGATGCTCTGAAGGAGATTAA
- Protein Sequence
- MQIILQEHARYYANKGLRATWNQNELLAALNDVKQNTLSINAAAKLHKIPATTLRRRLKNESDKKSSLGAPTNLGVQNEQKRSCGVWPLNLLKNTRQSNNFNRAKKLTGVGWLQLFLHHHPELSVRKSEGVSISRANGMEKEEVSKYFKLLKETSICHAIVDKPGNLFNVDETGCQLNNRPEYCNAKGSFLPPASVFTGIRKKLEWEDRMPPGLQFGKLLSSASEKAATSENGISGFSSTGIFTFNPEIIPEYAYINHHCEDQPAVPIIAPVTSPTLQDSTAASTSQEAQVASDITPGKMALSKIPNTKVSQFEIMVNYMTQHPELSKGYLKTPEARQKSKHLWTNLSNDLNAKGPPQRDAEGWNRVWADFKVRTKAQLRKKKINLSGTGGGPPKHHSLTPLEEKVSELLDLGEAIDGMNGSLSFGLQDTSMSCSRQDHEEDEDVSEMFEVIAKTETNINDNISEKEDSYSSKSKLSINTLPNQFHRCSEGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -