Ecor004964.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000051.1:5287526-5289885[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-09 3.7e-06 27.4 0.0 3 40 17 54 15 59 0.89
Sequence Information
- Coding Sequence
- ATGCCCCGCACATATGAAAAAAAGAGATCACCTGCCCAATACGACATTACTGATCTTAAAAAGGCAGTTTTTGACGTTGTCAACAAAAAAATGACATTCCGGCAGGCTGAGGAATATTATCATATTCCAAAAACTGTTATTTTCAACAGAATAAAAGGCCGAAAAACACCCGTCATGATAATGGGATCTGGGAGAACACCTGCCATTCCTAAAGAAATTGAGGATGAAATAGTTCGGTGTCTTATAACACGCTCAGAAATGGGCATTCCTTGTGATAAAAAAGAAATGCGGGAATTAGTCGGGGAATATATTAAAGCGAGCGGTTTAAAAACACCTTTTAAAAACAATGTTCCAGGGGAAGATTGGTACTTAGGGTTTATGAAGCGCAATCCCCAACTTTCATTAAAAAAACCCGAACATTTACAAAAGGTTCGGAAGGATGCAAGGAATCCCTTTGTAGTTTATGATTTTTATGATAAACTCCAGAAAGTAATAGAAGAACATCAATTAGCCGATAAACCACAGTTTGTTTTCAACGCAGACGAAAGTGGCTTTCACCACGATCCTAGTCGTATTCGTGCAATAGGCGTAAAAGGCAAAGCTTTGAGTAGAGTTTCTGGAGGATCTGGACGCGAATCCACAACTGTGCTGGCATGCGTGTCTGCGGATGGTTCAGTATTGCCACCATTGATAATTTTCAAAGGTGCTGCTGTACAAGCCAGGTGGACTTCAACAGATGGGTTTCCTGGAACGTTGTATGCAACCTCAAAAAATGGTTGGATGGAAGAAGCACAATTTCTCAATTGGTTTGCAAACGGTTTTATTCCGTTTGTAAAAGAAATTCGCTCAAAAGAATCCACCCTAAATCAGTCAGCTTTGCTTGTATATGATGGACATTGTAGTCACATAAGTGTTAAAATCATTGAAATAGCTCTGCAAAACAATATAGTATTAATGCGCCTACCAAGCCACCTTACAGACAAAATGCAACCTTTAGATAAATGCGTCTTTGGCCCAATAAAAACCCATTGGGAAAAAAAACTGATTGCCTATGGTAAGACACAAATGGGTAAAGGCTGTATGCGTTTAAGTAAGCAATTGTTTTCTCAATTCATCGGAGAAACTTGGAAAGAAGCCATGAGCGCAGACAACATTATTTCTGGGTTTCTAAGCACTGGTTTGTTTCCTGTTGATCGATTTAAGTTTCCTGAAAGTGAATTTCCGTCAAAGCTTCTCCAAGACTATCATAAAAGTTTAAATGCTTCTGATATGGTGTCAGCACAAAGCGAAGCCGTTCTTGAAATAGAAAGCAGTGAACAAGTTTCCAATGCAGAATACATCTCTCCTTTGGGTTTCTGCCCTAACGACAATAACATTGATTCGACTCACTTTTCCGATGACGTTTTAGATGAAAGGCAAATTCAATATCCGCCACCTCTAGAATTTGAACAGAACATGGTTACAAACCCTATTGAACTTGATGCATCCCATAGAGAAGAACAACAAAATATACAAGATACGATCACCGATTTATTTTGTAAAGCAAGTCCTTCAACATCAAACATTTTTCTAAGCGAACCGAAAAAGCCAACACCAAGACTGAAACAAATGACATACGGGGAAGTTTTGACAACAGAAGAAGTACTTAAACGACTGAGAGACGCCGAAGAAAAAAAACAAACAAAAAAACTTCCTAAGCCTAAGAGAAAAGAAGTTTGCCAAATCAGTCAACCCATTGAGAAAAGGCGATCCTCAAGTTGGAGTTCAGATGACTGCGATGGGGAAAAAAATATCGTTTATGATGAAGATAGTCCATGGAACGAAGAATTCGAAGAAGATGACGAAATTGAAAACTTAAACCCTGTGGATCATTCTACCATTAAAAAAGGCCAATTTGCTTTGACCCAGTTCAAAGGTGGAAGCAGACTTACATCTATATTCAAATATGTGTGCGTAATCGAAACATGTCAGAAAATTGATAAAATTGAAATAACTCTTCTTAAAAGCTTGGACACCACCCGAAAAACCTTTGCATTGGTTCCATCCGAAAAAAAAACAATTCATATTAAAGAAATTATTGGTTCTCTCCCAAATCCAACTATGGTTATGATGGGAAGCAGAGTTCACTATAAATTTGAAAAAAGTGTTAGTGTAAAAGAAAACTAA
- Protein Sequence
- MPRTYEKKRSPAQYDITDLKKAVFDVVNKKMTFRQAEEYYHIPKTVIFNRIKGRKTPVMIMGSGRTPAIPKEIEDEIVRCLITRSEMGIPCDKKEMRELVGEYIKASGLKTPFKNNVPGEDWYLGFMKRNPQLSLKKPEHLQKVRKDARNPFVVYDFYDKLQKVIEEHQLADKPQFVFNADESGFHHDPSRIRAIGVKGKALSRVSGGSGRESTTVLACVSADGSVLPPLIIFKGAAVQARWTSTDGFPGTLYATSKNGWMEEAQFLNWFANGFIPFVKEIRSKESTLNQSALLVYDGHCSHISVKIIEIALQNNIVLMRLPSHLTDKMQPLDKCVFGPIKTHWEKKLIAYGKTQMGKGCMRLSKQLFSQFIGETWKEAMSADNIISGFLSTGLFPVDRFKFPESEFPSKLLQDYHKSLNASDMVSAQSEAVLEIESSEQVSNAEYISPLGFCPNDNNIDSTHFSDDVLDERQIQYPPPLEFEQNMVTNPIELDASHREEQQNIQDTITDLFCKASPSTSNIFLSEPKKPTPRLKQMTYGEVLTTEEVLKRLRDAEEKKQTKKLPKPKRKEVCQISQPIEKRRSSSWSSDDCDGEKNIVYDEDSPWNEEFEEDDEIENLNPVDHSTIKKGQFALTQFKGGSRLTSIFKYVCVIETCQKIDKIEITLLKSLDTTRKTFALVPSEKKTIHIKEIIGSLPNPTMVMMGSRVHYKFEKSVSVKEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693725; iTF_00693726; iTF_00693727; iTF_00694545; iTF_00312534; iTF_00312535; iTF_00312536; iTF_00312537; iTF_00313401; iTF_00313402; iTF_00313403;
- 90% Identity
- iTF_00694545;
- 80% Identity
- iTF_00693725; iTF_00693726; iTF_00693727;