Ecor010848.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000122.1:1996750-1998401[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-09 7.3e-07 29.6 0.0 2 42 16 55 15 58 0.81 2 2 5.9 2.5e+03 -0.9 0.2 14 23 137 146 133 148 0.82
Sequence Information
- Coding Sequence
- ATGCCACGAAAATATAAAAGAACAACAAACCGAGGAAGTTGGAGCGAAGAGGCATTGGAGGATGCTCGAAAAAGCATTGAAGATGGGATGTCCGTTCGGAAAGCCGAAAAATTGTTTGGTGTACCGGCTAGAACTCTTTCGAGACGGTTAAAAGATGGAAATTTTGAAAAGAAACCACTAGGCTTTATGGGTGTTCTTGGAAAAGAAAATGAAAGAAAGCTAGCAGATCACATAAAAAAATTAGCGGCTGCAGGATTTGGTGTTGACAGAGAAGGAATTAGGAGCTTGGCGTTTAAGCTAGCGGAGAAAATGAATATCAAACACAAATTTAACTCAACTAAAAAAAAAGCTGGATATGCATGGCTTGCCTCCTTTTTGGAAAGGAATAAAGACATTTCATTAAGACAATCCGAAGGACTTTCCCTTTCCCGTGCTCAGGGTATGAATCGATCGTCAGCAAATGACTTTTTTGAAGTTCTTCACAAAGTTTTAACTGAAAACAATTTAATGGACAAACCTGGAAATATATTTAATATGGACGAAAGCGGATTACAACTGAACAATAAACCGGGAAAGGTGTTAACGCAAAAAGGTGTTAAGGACGTTCATGTGGTAACTGCTAAGGAGAAAGGAGAAAATGTCACTGTTGTAGCATGTTGTAACGCAGAGGGAAACTTCTTACCACCTGTTTTGATAATGAAAGAAGTAAATAGAAAAGCAGAGTTTATGGACGGATTACCAAGTGGCTCCGATGTTTACATGAACAAAAAATCATCGTACATCAATACTGAGTTATTTTTTAGATGGTTGAAAGAACATTTCATGCCACGAAAACCTGTAGGTAAGACACTGTTAATCTTGGATGGTCACACGTCTCACAGCAACGCCTTGGAGATGCTGGAATTTGCTGAAAACAACAAAATCATTATCCTCTGCTTACCAAGTCATACTACACAAGCACTGCAACCTTTAGATCGAAGTTTTTTCAAGCCATTAAAATCGTTTTTCCATAACGAAGCCAAGGCTTGGATGAACCATCATAAAAATAGAACCATAACGAGATACCAGGCTGGGCATTTAATTGGGAATGCATGGGAGAAAGCAGCGTCTGTTGGAAATGGAGCTTCAGGTTTCAGAGCCACAGGAATCTACCCTTTTAATCCTCAAGCTATTCCAGATCACTTCTTTAGCATATCAGACTCAGCTGCAGTCGAGGTTCAGCAATCGGCAGCTCTTCCGTCAGAAACGATCGTTTTATCTCCTGAATCGAACTTGGAACCGGTAATTCCAACCACCAGCAATACATCGCACAACTGTAATCATTCTGAAAATGAAACACACACTTCAACATGCTTCAATAAACCTACGCCAACAAAACTACTTCAAGAAATTTCACCACTGCCCAAAATTCCAGCGCTGACTTTTTCAAGAAGAAGACAGAAGGCAGAAGTCTTAACTTCACCCAGCTCAATAGAAAAAAGAAGAAAATTAAGTCTCCAAAGCCCCAAGAAGAAAAAAAAGCTTCAAAAAGGAAGATTGAGCCGGCTGCGAATCCTAATGTCTGTGCGGAATGTTGGGAAAATTATTTTTTGA
- Protein Sequence
- MPRKYKRTTNRGSWSEEALEDARKSIEDGMSVRKAEKLFGVPARTLSRRLKDGNFEKKPLGFMGVLGKENERKLADHIKKLAAAGFGVDREGIRSLAFKLAEKMNIKHKFNSTKKKAGYAWLASFLERNKDISLRQSEGLSLSRAQGMNRSSANDFFEVLHKVLTENNLMDKPGNIFNMDESGLQLNNKPGKVLTQKGVKDVHVVTAKEKGENVTVVACCNAEGNFLPPVLIMKEVNRKAEFMDGLPSGSDVYMNKKSSYINTELFFRWLKEHFMPRKPVGKTLLILDGHTSHSNALEMLEFAENNKIIILCLPSHTTQALQPLDRSFFKPLKSFFHNEAKAWMNHHKNRTITRYQAGHLIGNAWEKAASVGNGASGFRATGIYPFNPQAIPDHFFSISDSAAVEVQQSAALPSETIVLSPESNLEPVIPTTSNTSHNCNHSENETHTSTCFNKPTPTKLLQEISPLPKIPALTFSRRRQKAEVLTSPSSIEKRRKLSLQSPKKKKKLQKGRLSRLRILMSVRNVGKIIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00664773;
- 90% Identity
- -
- 80% Identity
- -