Ecor025703.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000750.1:109741-119351[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 5.3e-07 30.1 0.1 5 35 1 32 1 39 0.91 2 2 0.65 2.7e+02 2.2 0.2 4 13 48 57 45 61 0.88
Sequence Information
- Coding Sequence
- ATGAGGAAAGCTATTGAGGCAGTCCGAAGCAAGACAATGGGCTACACTAGAGCGGCCAAAGAATTTCGCGTCCCGAGAACAACGTTAAGAAGGAAAGTTGGAAAGATTCGAAAGAGCATGGAAGGAAAGAATTCTGAGTATGCGCTCCAGGCAGCAGTTCATGCAATCCAGCGCATGGTCGCCTTCACGAAGGAGGCGAGATTCGCCGAAACCACCATGGAGGGAATCGAGGTACGTCAGGAAGCGCTGGCAGATGCTTGGGCCCAGGCCAAGATAGCAGAGGGACAGCTGACCTCGGGCAATGACCCATTAAAGATGGCCGAGGTGGAAAGAAAGATGGCTGAAGTTAAGGAACATTATTTCCTAGCCTCAGCTACACTCAAGCGCAGAAGGGCCGAATTACAACCTTCGGCTCCGGAAAGAAGGGACCAGCAGATCGAGGTGCGAGTGTCGatgccattctcgcaacatgatactgcctgtaagtgggaGGAGGCTCGCCGTTCAGAAAGTCCAACGGTGAAGGAGATATGCACCTTCCTCGATAAGTGGTCGGTTGCATTTGAAAGTGCGCAAGATTGCCGGCGCAGAGAAGCTTCCAGGCCGTCGACGTCGGCGCAAGCAGTTGCGCGGGAAAAATTGACGGAAAGAAATTTGGAAAGACGCCTGGAGAGACCAACCGGAAAGAGGAGGTCTGGCAAAAACAACGAGCCAGGTAGATGGAAAGAAGAGAATGCCATGTCAAGCATGTCACTCTATGGCACACCCTATATGGGAGTGTCCGGAATTCCGGGTCCTGAACCTAAAGGCAAGACAGGATCTGGTGCAAGAGAAGAGAATGTGTACGAATTGCCTGAAGAATGGGCACAATCCGACAATGTTTCTTCTTTTTTATATTAA
- Protein Sequence
- MRKAIEAVRSKTMGYTRAAKEFRVPRTTLRRKVGKIRKSMEGKNSEYALQAAVHAIQRMVAFTKEARFAETTMEGIEVRQEALADAWAQAKIAEGQLTSGNDPLKMAEVERKMAEVKEHYFLASATLKRRRAELQPSAPERRDQQIEVRVSMPFSQHDTACKWEEARRSESPTVKEICTFLDKWSVAFESAQDCRRREASRPSTSAQAVAREKLTERNLERRLERPTGKRRSGKNNEPGRWKEENAMSSMSLYGTPYMGVSGIPGPEPKGKTGSGAREENVYELPEEWAQSDNVSSFLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -