Ecor013594.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- bab1
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000177.1:330124-331584[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-17 2.9e-14 53.3 0.0 1 43 28 71 28 73 0.95
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAATACCAATCAAAATCTCATGCACCATCTGCGCTTTCGTGAACGAGGTCCATTGAAATCATGGCGACCCGAAACAATGGCCGAAGCCATTTTTAGTGTTTTGAAAGAAGGCCTCTCTCTGTCGCAAGCTGCACGCAAATATGACATTCCATATCCTACGTTCGTTTTGTACGCCAATAGAGTTCATAATATGTTAGGGCCTTCAATAGACGGTGGCACTGATCTGCGACCAAAAGGTCGAGGGCGTCCACAACGAATTCTTTTGGGCATTTGGCCAGACGAGCACATAAAAGGTGTAATCAAAACTGTGGTATTTCGTGATGCAAAGGAGTTGAAGGACGAAGGTCTGCATTTGCATTATGGACGCCATTCTCCCGTGTTTCCATTTCAAGACAACGCGCTTAACTACCCAGGAGCACCGGGCTGCCCCAATGGTCTCCCAGCGGGCCCTGTTGGTCCTTCTGTAGCTGATTCAATGTCTCAAGAAGCAACTGCAGCTGCTGTGGCGGGTGTGGCGCACGCGCTGCGTCAACAAATGCAAATGGCTGCTGCACAACAACATCCCCATCAACAACCATCCCATCAGCATCATCATCCCGAAACATCTTCCAATATTTTCAACTTACCCGCACATATGTCGCCCCATGGTAGTGCCAGCGGGATTCCATTACCAAAGCAAAGTTCCCCCATTTCAAGTGGACCTGGACAGAATCCAATGCAGAGGCATGCTTCACCGTCCGCGTCAAACATGCCTGGTCTTCCTAATCTAAACTTAGCCAATATACCGGGACTTCACATGGTCCCGGGCATAGGATCGAGTATGAGTTCAGGAGGAGGAGGAGGAGGTCCTTCGTCATCAACTTCCTCCCTACACCGAGGAGAGGGCCCTCAACAATCAAGCCACCAGTCCAATATCTCACCTGTCCATAATCTGTTCAGCAGCAGCAGTAGTTCAGTACACAATCCCCAACATCCGGTGGCTCCGCCGTCCAGTAGTAGTAATCCACGACTCCATCCGACCTCACCCTCGGACTCAGCGCACGATCTCCGGATGAACAGTCCCGACGAGAACCTGCTCAGCTCTCCATTGCAAATGTCCCTTGAGCCAGCTGTCAATTTGGCCGTCGGTGTAAGCGGAATGGCCTACAAACCATCACGAGGCTACTCCTCACCACGTCCAGAACATCTTTTTCAAGAAGATATTGCAGAGCTTGTCGGTTCTGCCAGTGATAGATCCTCAGCATGTCCTTCCAACTTAAACAACTACAAGGATACACCGGCAAATATTAAACTAGAACCTATCACAGAATGTCGGAGCGAATAA
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKDEGLHLHYGRHSPVFPFQDNALNYPGAPGCPNGLPAGPVGPSVADSMSQEATAAAVAGVAHALRQQMQMAAAQQHPHQQPSHQHHHPETSSNIFNLPAHMSPHGSASGIPLPKQSSPISSGPGQNPMQRHASPSASNMPGLPNLNLANIPGLHMVPGIGSSMSSGGGGGGPSSSTSSLHRGEGPQQSSHQSNISPVHNLFSSSSSSVHNPQHPVAPPSSSSNPRLHPTSPSDSAHDLRMNSPDENLLSSPLQMSLEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIAELVGSASDRSSACPSNLNNYKDTPANIKLEPITECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01044639;
- 90% Identity
- iTF_00334901;
- 80% Identity
- -