Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_945859775.1
Location
CAMAOS010002144.1:7236-9863[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.5e-14 1.5e-11 44.6 0.0 1 38 11 49 11 56 0.94
2 3 7.1 3e+03 -1.1 0.0 28 42 351 366 351 368 0.90
3 3 5.1e-18 2.1e-15 56.9 0.0 1 43 476 519 476 521 0.95

Sequence Information

Coding Sequence
ATGACACCAATAAGTGGACGTCGGACTTATACCGAGGAAGAATTGAATAACGCATTGCAAGATATAATAAGTGGTAAATTAGGTACACGGCGAGCTGCCGTACAATACAACATTCCTCGTTCTACTTTACGAAACAAAGTGTATAAAATTTCTTCGGGAGCAAGGCGTGAGATGCTTACAACACTGCAATACATGCCAAGTATTGAAGATTTAGCTAATATTGAATACGATAAACATGATTTGACAGTCGATGAAGAAGACAGCAATGGTGAAAAGGTACAAAAAAGTTCGTTAATGTCGCACACTAATGATGATCTTGCTGACTCTACCGATGTAGAAAACAAATCTCTTACCTCCGATCCATCAAAATCTGAACCCCACTATATTGAAGCTCATACTAAAGAAACCACATCACAAGAGTCACAGCCAAAGCATACAACATTATCGCCACAACTTCCACCGCAACAATCCTCTTCGATTGGACAAAATGTGTGGCAGAATGTTCTACTCCATAGTTTGCTTCTTTCCGGAAGCCTTTCTATGCAACAAAATTTCGAGGAAGCCTTTAAGATTTTTAATAGTTTGCTATTAAAACAGGATCTAGACTTACTTAATCCTCAAATTTTAAAGCAATTACAGCAATCCGAACAATCAGCGCAACACTCACACCAAATCACAGATGAGCAGCAAAGCCTACAATCAAAGTCACCTGCAATACGCGTACAGGGAGCATCTTTTCAAAGCCGTCTACAGAAGGCTGAAACACCGGAAACTGAATATTCAGCGGAGCTTAATGAAGCGCTTGGTGATGATCCATCAGTTATTTTAAAAATTCCGTCCTACAAACCGGTAGCTGTATCGTTCACTTCAACATCCTCACCTTCAGAAGCATCAGAACTATGTAATAATTCAATGATTGAACATTTACCCCCAACTCCACCAAAGATTTTGACACAAAGTTTAGTTAAAGCTAACACATCAACGCAACAGATACAGCATAGCCACCAACCGCACCCACAACACGTTTCATTGATATCATCAGCCAATGTAATTCCTGTCTCATCTCTATCTATAAAATGTCAACAGAGGAGGGAATCTCGAGCGTCACCAACTCTTTCTCTGCGTGATGTCATTGCGAACAGTATAAGTAGAACTTTTAATCAGCAGGCACAAATTGAAGCATCAAGCTTAAGTCCTGTTCCTTCTACATCGTCAGCAATGGACATCAGCGAAAAGAATAAAAGACCAAGCATATCAGTTGTTAAAAATATCGGTGGCACTGATACTTCACGTTTTGCTGTTGCATCCAATATGTTCGGTCATCTTCGCTCTAATAACCATCAGCATCAAACTCAAAGTTTGGCAAACAACAATTTGGCTGGTGGGAAAGGTACGCGTCCGAAACGTGGGAAGTATCGAAATTATGATCGAGATAGTCTTGTTGAAGCTGTCAAAGCAGTGCAACGCGGAGAAATGTCTGTTCATCGAGCTGGGAGCTACTACGGGGTTCCACATTCGACACTTGAATACAAGGTAAAGGAGCGGCATTTAATGAGGCCACGCAAAAGAGAACCAAAAATTCAACCAACGTTAGATGATAGGTCAGGAGAAAACAGCCCAAGTGGAAACATTTTGGGTTCAACTATACCCACTTTGAAAAACACAAATACTCGCGACCTGTCTGCCGTTGACAATATAGATAGCTACATTAAAACTAGTTGTAATTCAAGCACAAATATTAGTCAAACACAATCTGATGCCAGCAAAAGTAGTACACTGTACTCCAAAACATCATCAAATGGCATGAAAATAGCTCCGGCATTGTTTGAGCAAACTTTAACGGCCCAACTGCATTATCCTTCGCACTTTTTCTGGCACGGGGGCTTTAACCCTCTTCAGCTGGATTTTGGAGCAAGATCCCAAGCACACTCAGCTGTTGCTGTTGCAACAATGGCTAGCTCTAGAAATGAAACGTTTCATTCAAGTCCCGAATTTCAGGAAGAACATAAACAACTTAATTTAATGGAAAATCCACCTCTGCAGAAAATAAAAAAAAGCTTCAGCAGTAGTACTACTATTAAGAATGTAGAAGACATTGCTACTAACCTTTATGAACCTGGAAGGGATACAAACGGTTCCTTTTTAGATGGCATTATACGAAAAACTTTGGACCGCAAGACTTCCGATTCAAAGCAAAGCGCATTACTAGATGAATTGGTTAAGAGTAAAAACATATCTTCGCCGAGAATTATTTTTAGCGAGCGCATAGCTTCTGATTTCCAAAATATGAAACGTTCCGGAAGCTCTGTATTATACCATCATTCAAAAGAGATTAAACGTGAACGTACCAGCCCGACATCAGATATTTCAAATTCCGATTCAGAAAAAAATATTCGACGTCCCTTCGAATCAAAACATCAACCTCCACAATCAAAATCAGACTTCCAAGAGGCTGATTTGGACAATAATTTTGTAAGCGAAAACAGTGGTTTAAATGACACCCATCATAAGACTTTTTATAAGTCCAGCAGGAACATGCCTATAGAAAACACATCAACGGTGCTGATTATTAGTAATGAGCATTCCAAACAGGAAAATATTAAGTCCGAAATAGAGAACAGTTTATAG
Protein Sequence
MTPISGRRTYTEEELNNALQDIISGKLGTRRAAVQYNIPRSTLRNKVYKISSGARREMLTTLQYMPSIEDLANIEYDKHDLTVDEEDSNGEKVQKSSLMSHTNDDLADSTDVENKSLTSDPSKSEPHYIEAHTKETTSQESQPKHTTLSPQLPPQQSSSIGQNVWQNVLLHSLLLSGSLSMQQNFEEAFKIFNSLLLKQDLDLLNPQILKQLQQSEQSAQHSHQITDEQQSLQSKSPAIRVQGASFQSRLQKAETPETEYSAELNEALGDDPSVILKIPSYKPVAVSFTSTSSPSEASELCNNSMIEHLPPTPPKILTQSLVKANTSTQQIQHSHQPHPQHVSLISSANVIPVSSLSIKCQQRRESRASPTLSLRDVIANSISRTFNQQAQIEASSLSPVPSTSSAMDISEKNKRPSISVVKNIGGTDTSRFAVASNMFGHLRSNNHQHQTQSLANNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKIQPTLDDRSGENSPSGNILGSTIPTLKNTNTRDLSAVDNIDSYIKTSCNSSTNISQTQSDASKSSTLYSKTSSNGMKIAPALFEQTLTAQLHYPSHFFWHGGFNPLQLDFGARSQAHSAVAVATMASSRNETFHSSPEFQEEHKQLNLMENPPLQKIKKSFSSSTTIKNVEDIATNLYEPGRDTNGSFLDGIIRKTLDRKTSDSKQSALLDELVKSKNISSPRIIFSERIASDFQNMKRSGSSVLYHHSKEIKRERTSPTSDISNSDSEKNIRRPFESKHQPPQSKSDFQEADLDNNFVSENSGLNDTHHKTFYKSSRNMPIENTSTVLIISNEHSKQENIKSEIENSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00694506;
90% Identity
iTF_00694506;
80% Identity
-