Basic Information

Gene Symbol
ct
Assembly
GCA_945859775.1
Location
CAMAOS010000058.1:393501-471036[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-26 2.3e-22 79.6 0.0 3 71 950 1019 948 1025 0.94
2 3 5.7e-32 9.3e-28 96.9 0.0 3 77 1380 1455 1378 1457 0.96
3 3 7.6e-31 1.2e-26 93.3 0.0 3 77 1598 1673 1596 1675 0.96

Sequence Information

Coding Sequence
ATGGACCAATTGGTGATATTGTGTGCACAGCAAAGGAAAGCAAAGCACAGTACAGAACAGTACAGAACAGAACAGAGGAGCCCAAAGGCAGAGCTCCCCAGCATAGTTCCTGCCACTGCCACTATAGTCGTGTCTCACAGCAATACACACGCTTTAATGTTTGTTATTTATGTACTGTGGCGCAGTCCTGAGACTCAAACTGACTCTGAGACTGAGACCTCCACAGCCCAACAGCCCCACGACATCCCTATACATCAACCCCCAAAATCCATATCCCTATCCCGATGTTATAAAGAAGGAATCACAAAAAAAAAAAACACAAGAAAAATGAGAAGCTATATCGGGGAAAGCACCAGCAGCACCAGCACCAGCACCAGCACCACCAGCAGCAGAAAAATAAAAGAAGAAGAAAAAATCAAGAGCCCCATGGATGATGGAGTCTGGAATACACACTTGCATACTTCAAGAGCTACATTGGCTGAAAAAGAAGTAAACACTTTAAAAGAACAATTATCCACAACTTCGACTGCAACAACAACAACAACATCTACGTCATCAACGACAGCAACAACAACATCAACAATCTATTCGTCACCACCATCCCCGTCATCGGTGAGCAGCACAATCCCAATACCAAATATCAAATTGTCATCACCAACGATAAACCACAATAACAACAACAGCTTCAACAATAATAACAAATTAAACAGCGTTGTTATAACACAGCATTTACACCAGAACGGAAATTTGCTGGCAGCTACACCATCACCATCTCCGCCATTATCTGAGAACGGTAGTACACTAAACGGATGCCTTAATTCGGCAAAGTTACTATTCAATCATCATAACCGAATAATGGACACAACATCAACAGCTTCGAATGTAGCTACTGATCTGTCAGCGGCATTGGCAGTAGCAGCAGCTGCAGCAGCAGCAGCCAATAATCCAGCTCCCACCAGTTTAGGTGCAACACAAACAACAACATCAACAACAAAAACAACAACAACAGACGCTAGCAAACTTATAACAGCGATGACAGCTGAAATGAATCTCCACCAAGACTCTAGCGAATCAGCAACACTGGCAAGTAATCAAATGTCAAATCGATCGCACAGCCCGCTTCTGTCCGCGCTAGAGTCAACCACTGGTATCGAGGCAACAAGAAACAATAATAATAATAGCATTAGTAACAATAATAATAATAACAATAATAATAATAATAATACAAATAATAGTAATAACAGTAGTAGTTGTAATAATAACAATTTTGCTGATGAATTGGCTGCCAAAGAAAAAGAGATTAAAGCACTTATCGCTGAGGTTACCCGACTGCAAGCCCTCCACGAAGAACACATTGTACAAATACAAAGACTTGAAAATAATTTAGAAACGAAAAGTCAACATATTCAGAGACTTGAAACTCGTCTGCAAACCGAAACCGAAACACAACCATTAAAAAGCTCCGAAGTTTCTATTGCCGCAAACGTAAACGCTATTAGCGAATCATGCCCGGCAGAAATTCGAGATCAGACAGAACCCATCACTTCTATCGTTCCCTCAGAACCATCCACAATGCCAGTTATGACAGTTGAAGGCATTCAAATTAAAAAGGAAAAGGAAAACCAATTATCATCATCATCTACGGCAGGTGACATCACACCTCATGAAGTGACAGCTGTAGCTGGGGCTGGCGCTGGTACTGGGGCTGTTGTCAATGACCCCAAACAGTTCCAAGAACTTTTAATCGAGAAAACTAAGACACTCTCGGCTGCAAATGAAGTACTCAAAGCCGAAGGAATTTCCAGTGATACAACTTTAGCAGCATCAGATGTAGACGCAATCAAGTCTTCTGATGATATCGAAGCTGCAGCATGCGAGGTCTCTAACAATGAGTCAGATGCAAACCTCCAGCATCAGCAGGATTTGCAGTCTCCATGCGATTCAGCGACTCCATCAGACCAGACTCCGTCGTCAAATACAAATTTCCCAAATGTCGATCAGTTCGGTTCGCTGCTTGGCGGTGAGTTGGTTAATTCATATTGGCGTCGTGGCTTCGACCACTTGTCATTAGCTCCGCCACCACCTTCGATGCCCTCGCAACAGACATCTTCAGCAACAAATGCCGCCGCCTCGGCTGGAATTGCGATAGCAGCACATCCACACCCACATCCACACCCACCGCCATCAGCAGCAACACACACAACCTCCAAAACGCCAACATCGATTTTTCAAAATTTCCCATCAATTTTATCGTGCCGATCGCCTCCACCACTCCCATTGTCGGTCACTGGACCATCAACCACAACTCTTTTGAGTCAACTAGTCAATTCAACCTTCTCATCGAATTCAACTCCTTCTCTTCGAATAGATTCCAATTCAACTACGTCGTCGTCGGTGACCACAACCACTGGCGCTCATCTCCAACAAGCTCCATTGCACCACCACCAGCATCTACACCATCAGCTTCCTGTTCTACAGCATCATCAGCAACATCACCAGGACTTCGAGAAGGCCAACAGCCATCATGATTCCTCATCAACAGCTAGCACTCCCAATCTGCAAGACCAGCGTTCCAATGACGGACACATGAGTGGTTCAAAATCCGCCAAAGCCCAAGAGGATAATAATAACTCACTAAGCTCCATGGCACATCTTCCACCTGCTTTCATGCCCAGTTTGCAATTCCAATTCCAAGATCGCGGTCCATTCCGCTTTGCCGAAGACATCCAGCTTCCACCTGGTGCCTCTATGGCTGGCCGATTGGGCGAATCCCTCATTCCCAAAGGGGACCCCATGGAAGCCAAGCTCCAGGAAATGCTCCGCTACAACATGGACAAGTACGCCAATCAAAGTTTAGATACGCTCCACATATCACGTCGTGTTCGAGAACTCCTCTCAGTGCACAACATTGGACAAAGACTCTTCGCTAAGTACATCCTCGGACTGTCACAGGGCACAGTGTCCGAATTGCTATCCAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGTTACCGAAAAATGCACGCCTGGGGATGCGATGATAACGCTGTGATGTTGCTCAAATCTCTTATACCAAAAAAAGATTCGGGCATTCCGCAATATGGACGAAATGATGACTCCATGTCGGATGATCGTATTGCACACATTTTGAATGAAGCTTCCAGCCTCTTGAAGACCCCTCAGGTACCAGGTTCACAGTTGCAGCAACAAATGAAACATGAATCCCAGCGTCTTCATCAGCAACAATCATCATCTCTTGATGATGAACAGAGTCAAGACGAATCGAAGTCACCGCATGCATCTTGTACGTCGCCTTTCTATAAAGATTCCCCAGTGCAACAACAGCAACAACAAACACAACAACAACAGCAGCAACAGCATCAGCAACGCCAAGAAGCTCAGCGTCGAAGTGTTAAGCCCGATGAAATGTCACAAGACAAGATGGCGAGAATATATCAAGAGGAACTGCAAAAGATCATGACACGCACTCCACGTGACTCTTTTCCAAGTTTTCTCTTCCCACACTTTTTTAGCGCTGCTGGTGGTCTCCCGCCTACAAATAGCGCAATGCCACCCGACGATATCCGAATGGCTTTGGAAGCCTATCACCGTGAAATGGCCAAGTTGCAGCAGAACAGCAGTGGAAATATACCCAACTTTCCGAATTTTTCCAGCTTGATGGCGCTGCAACAACAAGTGTTGAACGGCGCTCAGGATCTATCCGTCCCAAAGGAAAACGAAATCAAAGTTAATGGCCAGCGACATTCGATGGAAAGCTGCGATTCCTCCTCCAATCAAACCAAAGAAACATCCGAAGAAGCCGCGCATCGTCACTCAAGTGCATTTAGCTTAGTTCGTCTTAAGCCAGATTCTGTGCCTGCACAAAATTCAAATTCCAATACAAATACCAATTCAGCTGCACCAAGTCCGCTAAGCAATTCCATACTTCCACCGGCTATGACAACAAGTGAGGACTTTTCCGCCGCTGCCAGTCCACTTCAGAGAATGGCCTCAATTACAAACTCACTAATTACACAGCCTCCAGTTACACCTCACCATACGCAGCCACAAAGACCCACCAAAGCGGTGTTACCACCAATCACTCAACAGCAGTTTGACATGTTCAACAACTTAAACACCGAAGATATTGTCCGTCGTGTGAAGGAAGCTCTTTCACAGTACTCAATCAGTCAAAGACTATTTGGAGAATCTGTTCTGGGACTATCTCAAGGATCAGTTTCGGATCTTCTTGCACGGCCAAAGCCTTGGCATATGCTTACACAAAAAGGCCGAGAACCTTTTATTCGGATGAAAATGTTCTTGGAAGATGAAAACGCCGTGCACAAATTAGTAGCCAGCCAATATAAGATAGCTCCCGAGAAGTTAATGCGGACTGGCAGTTACAGCGGCAGTCCACAAATTCCACAAGGTCTGGCGAACAAAATGAACAGCATTCCCATGCAGAAAATGATGAACGATCTTAAAATGGAGCCTCAAGCACAACATCTAATGCAGCAAATGCAAGCAGCTTCTGCAATGGCGGCAGCTGCTGCAGCAGGACACATGCAAAACGCCCAACACCAGGGAATGTTGCTAACCACTCCAGGGCTCCCACCACAACATGCAATAAGCCTGCAACAAGCCGCCGCTAACGCTGCTGCTGCCAACGAAAAGAAGCCAATGATGATGCCAATTCACTCACCGCACCAAGCCAATGCCATGCGAAGCAACATGCACCAACACATGTCACCGACAGTCTACGAGATGGCAGCCCTCACTCAAGACCTGGATACACAGGTTATAACAACAAAGATAAAGGAAGCTCTCCTTGCCAATAATATTGGTCAGAAGATTTTTGGCGAAGCAGTTTTGGGGTTGTCACAAGGATCAGTTTCTGAGCTCCTCTCGAAACCAAAACCATGGCATATGTTGAGCATCAAAGGTCGCGAACCTTTCATTCGAATGCAACTGTGGCTTTCGGACGCAAACAATGTGGAACGCCTTCAGGTACTTAAGAACGAAAGGCGAGAAGCTAGCAAACGCCGACGATCCACAGGTCCAAATCAACAAGACAACAGCTCCGACACAAGCAGCAATGATACTGCTGACTTCTACACCAGCAGTCCTGGTCCTGGGTCAGTTGGTTCAGTTGGAGCTCCACCAAACAAAAAACAACGTGTTCTCTTTTCTGAGGAACAAAAGGAAGCACTACGCCTAGCTTTTGCTCTGGATCCTTATCCAAATGTGGGAACCATTGAATTTCTGGCGAACGAATTGGGTTTAGCAACGCGAACCATTACCAACTGGTTCCATAATCACCGAATGCGCCTCAAGCAGCAAGTGCCGCACGGCCAGCCGTCAGAACCCGTTCCAAGTCGAGAAAATACCAACGCAACACCTTTCGATCCAGTCCAATTTCGTATTCTCCTTAATCAAAGACTGATGGAATTACAAAAGGAACGTATGGGTCTCAGTGGTGCCCCCATACCTTACCCACCGTATTTTGCCGCCAATCCAAACTTGGCGGCACTAATAAGTCGTGGTTTGCTTCCCGGCGGAACAGAACCCGATTTGCAAGCTCTAAATAACGCCTTCAAAGAACAAATGAGTGGTCTTGATCTTTCTCTTAAAAGGGAACGAGACGGAGACTACGACGACGATGGTGAAGACGAATCCCATCTATCAGATAATGAGTCCATAAATGAGAGTGACGAAAAGTCAGAGATGAGTGAAACACCCAGATCTTCACTTTATGGCTCCATGGGTCAATCTCGGACATCACGACGGAAGCCTGCTGCCCCCCAATGGGTCAATCCCGATTGGCAGGGCGATGGTAAAACAGGGTTAATACCTCCACCTCCACCCGGAGGTACCACCGACAAAGAAGTCATCATAAATGGTGTTTGCGTTATGCAACAACAAGCTTCTGATTACAGCCGAAAATCCGGCAATGGCGAAGATGATGAAGAATGCGCTTCCGATGCCAACGATGATGAACCAACGACTCATCATCGTAATCAACCTTCGGACTGCGAAGACGCCCCTTCTGACATCGACCAAAGGTTCATGGAACCTGAAGTTCGAATTAAACAAGAAGAAGACTGTGACAGCAATGATAGCCATCAAGATAACTTGGACTTAAGGAAACAACAACACCAACTCCAACATCGGGACGAAGAAGACGACACCCCAGGCGCATGGAATTATTAA
Protein Sequence
MDQLVILCAQQRKAKHSTEQYRTEQRSPKAELPSIVPATATIVVSHSNTHALMFVIYVLWRSPETQTDSETETSTAQQPHDIPIHQPPKSISLSRCYKEGITKKKNTRKMRSYIGESTSSTSTSTSTTSSRKIKEEEKIKSPMDDGVWNTHLHTSRATLAEKEVNTLKEQLSTTSTATTTTTSTSSTTATTTSTIYSSPPSPSSVSSTIPIPNIKLSSPTINHNNNNSFNNNNKLNSVVITQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSAKLLFNHHNRIMDTTSTASNVATDLSAALAVAAAAAAAANNPAPTSLGATQTTTSTTKTTTTDASKLITAMTAEMNLHQDSSESATLASNQMSNRSHSPLLSALESTTGIEATRNNNNNSISNNNNNNNNNNNNTNNSNNSSSCNNNNFADELAAKEKEIKALIAEVTRLQALHEEHIVQIQRLENNLETKSQHIQRLETRLQTETETQPLKSSEVSIAANVNAISESCPAEIRDQTEPITSIVPSEPSTMPVMTVEGIQIKKEKENQLSSSSTAGDITPHEVTAVAGAGAGTGAVVNDPKQFQELLIEKTKTLSAANEVLKAEGISSDTTLAASDVDAIKSSDDIEAAACEVSNNESDANLQHQQDLQSPCDSATPSDQTPSSNTNFPNVDQFGSLLGGELVNSYWRRGFDHLSLAPPPPSMPSQQTSSATNAAASAGIAIAAHPHPHPHPPPSAATHTTSKTPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRIDSNSTTSSSVTTTTGAHLQQAPLHHHQHLHHQLPVLQHHQQHHQDFEKANSHHDSSSTASTPNLQDQRSNDGHMSGSKSAKAQEDNNNSLSSMAHLPPAFMPSLQFQFQDRGPFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNDDSMSDDRIAHILNEASSLLKTPQVPGSQLQQQMKHESQRLHQQQSSSLDDEQSQDESKSPHASCTSPFYKDSPVQQQQQQTQQQQQQQHQQRQEAQRRSVKPDEMSQDKMARIYQEELQKIMTRTPRDSFPSFLFPHFFSAAGGLPPTNSAMPPDDIRMALEAYHREMAKLQQNSSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRHSMESCDSSSNQTKETSEEAAHRHSSAFSLVRLKPDSVPAQNSNSNTNTNSAAPSPLSNSILPPAMTTSEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHLMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAANEKKPMMMPIHSPHQANAMRSNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALISRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSLYGSMGQSRTSRRKPAAPQWVNPDWQGDGKTGLIPPPPPGGTTDKEVIINGVCVMQQQASDYSRKSGNGEDDEECASDANDDEPTTHHRNQPSDCEDAPSDIDQRFMEPEVRIKQEEDCDSNDSHQDNLDLRKQQHQLQHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00693660;
80% Identity
iTF_00693660;