Ecor009166.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- retn
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000096.1:6082559-6124810[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.41 1.7e+03 0.3 0.0 41 65 188 213 181 224 0.74 2 2 2.3e-20 9.2e-17 62.1 0.0 2 79 355 430 354 431 0.93
Sequence Information
- Coding Sequence
- ATGGCGTTCCCAACCGTATGCGCCATGACGGCATTACATCATCTGACATCTCTGTTGTATGTAAACTTGTTTGCGAAACATTTTCAGTCGGTTTATTTAGACAGTTGTCCTAATATACATAATGCTAGAAACATAAACTCTTCAAATACTCCTAATAATGTAGGCAGTTTAAGTTTATCCACTTCTGAGATTGAGTTAGAGTTGTCTAAGCTTAAGGGTGATAAGCGACGTGATATTGATGGAATGCATTGGCTGACTTCCGCAAGGAAGTCATTTAGAGTCGAAAAGATCCAAAACTACAATGAGAGTTGTAGTGAAAAGGCTTCAATGGGACATAGATCGTCGAACGACGAACACTCTGAGGACGACATGAGAGACTGTGAATCAATGGATGACGAAAACACCAGTCGATTAAACACCTCAATGGTCAACGGAATGACTATGGACTACGTAGGACTCGGAGGTGGCAGGAGCCCCGACCAACAACATAATACAGAAATTCCAATGAGTCATCATGGACAGTTTGGAGCGAATCATCCGCTGGGCGCTCTAGGAAATTTCATGAGTATGGGTGGCCTCCACAGCATACCAAACCTACAGCAACAGCACAATGATGTGTTGGAGAAATTGAAGATGCAAGTCCGCGACATGAAAGTGGGCCTCATGGATCAAGAGTACCCACCACATAGTAACTTTGGCTCAAATGTCATTCCAACACCCATAAATACGGCATTCACAATCCCGCCAACTTCACACAACACATTCAGCCACTCCCCGCAGAATCTATCGCAGCAGTCACCACAGCCTCAACAACCCTCTAGCTTGCTGTCATCAACGCAGCAGCTTTCGCAACAGTCTCAACCACAAACGAGTTCCCAATCGATGTCAAATGGTTTCTCGTTTACATCACCCTCAGCACCAAGCACAAAAGATGTTAACCCAGCGTCTAACTCATCGACATCCAGCGAAACATCCAACTCTTCACAACAGAATAATGGCTGGAGTTTTGAGGAACAGTACAAACAAGTTCGACAGCTCTATGAAATCAATGATGACCCTAAACGCAAAGAGTTCCTGGATGACTTGTTTTCTTTTATGCAAAAGCGGGGTTCGCCAATTAATCGTTTACCAATCATGGCAAAATCAGTTCTTGATCTGTATGAGCTCTATAACTTAGTTATTGCTCGGGGTGGCCTCGTCGATGTGATCAACAAAAAGCTATGGCAAGAGATCATCAAAGGATTACATTTGCCGTCGAGCATAACGAGTGCAGCGTTTACATTGCGCACGCAGTAA
- Protein Sequence
- MAFPTVCAMTALHHLTSLLYVNLFAKHFQSVYLDSCPNIHNARNINSSNTPNNVGSLSLSTSEIELELSKLKGDKRRDIDGMHWLTSARKSFRVEKIQNYNESCSEKASMGHRSSNDEHSEDDMRDCESMDDENTSRLNTSMVNGMTMDYVGLGGGRSPDQQHNTEIPMSHHGQFGANHPLGALGNFMSMGGLHSIPNLQQQHNDVLEKLKMQVRDMKVGLMDQEYPPHSNFGSNVIPTPINTAFTIPPTSHNTFSHSPQNLSQQSPQPQQPSSLLSSTQQLSQQSQPQTSSQSMSNGFSFTSPSAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -