Basic Information

Gene Symbol
pol
Assembly
GCA_945859775.1
Location
CAMAOS010000612.1:1-73464[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.9e-25 2.4e-21 76.9 0.0 24 134 369 478 354 498 0.81
2 4 4 3.2e+04 -6.3 5.3 83 138 640 695 624 712 0.72
3 4 0.0055 45 4.1 0.1 119 153 1527 1562 1501 1576 0.69
4 4 3e-28 2.4e-24 86.7 0.2 152 221 1661 1729 1658 1731 0.94

Sequence Information

Coding Sequence
GCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACACCCATCATCAACATCATCGGCGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCTGCAACAGCTGTTGTTGTAACCACCGATCAACATCGCCAACAACAACAACAGCAACAACATCAAGCAATTAGCATTAAACGTGAACCCGAAGATCTGCGAAAGGATCCCAAATGCGGCAATAACGGTGCTGGCAACAATAATAACAACAACAACAGTAGCAATGGAAACGGCGCTGGTGGACACAGTCAAAAGGTATTAGTTGTACAATCACCTACGCCATCAATACAAATTAAGGATCCACCACCCAGTCCTGGAAGCCCAACAAACGAAACCATGTACGCTGCCGGCGGCAGCACACAAATTTACCTCCAGGGACCACACCAGACAGGTTCTTCTGTAACAGGTGGATCAAATGTTAACACACATAGCCCCAGCCCTGGACCATATATCTCACCGGATAGCTATGGAATGTACACAACCCGTCTTGCAACCGGACCCAATTCCACATTCATCTCGGAGCCATATTATCGTGAATACTTTGCTGCCGATGGACAAGGTGGCTATGCGCCCGCAACACGCACCGTCTATGGCGATAGTGAGGGACCACAACCGGGTACAACCTATGAGGGCCGTTTCACAACATCACACACTAAAAATGGTACACCTGTCTATGCAAAAACTGTTACAGCAGCCGGCCTCACAGTGGATTTACCAAGTCCCGATTCGGGAATTGGTGCTGATGCTATTACGCCGAGGGATCAAAACAATCTACAACAGTCATTCGATTACACGGAACTATGTCAGCCTGGTACATTATTAGACAGCAGCGGTGCAATACCAGTTTCAGTAACTAGCATGCAACGTGCTGTTAGCATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAGTGGTGGTACACCAGGGACACCAGGAACGACACGATCAAGGCCATGGCATGATTTTGGTCGGCAAAGTGATGCCGATAAAATTCAAATACCAAAAATATTCGTAAATGTAGGATTTAGATATCATCTAGAAAGTCCGATTAGTTCGTCACAAAGACGAGAAGACGATCGAATAACATACATCAATAAAGGACAATTTTATGGCATCACATTGGAATATATTCCAGACCAAGATAAACCAATCAAAAATACAACAGTTAAGAGTGTAATCATGTTAATGTTCCGAGAAGAAAAAAGTCCCGAAGATGAAATCAAAGCCTGGCAATTTTGGCATAGTAGACAACATTCTGTAAAACAGAGAATACTAGATGCTGATCTACTCAAAACTTTACCAGAATTTACTGGTAAACCAACAGAATTGGAAGAATTCGTGAGATCCGCGAATTTGGTGTGGAATGCACTGAGCACAATAGAAAACGCACCATTGCAATTGTGGTTGCAAGTTCTTAGAAACAAGATCAAAGGTAAAGCTTCAGATAGATTACGCCTCTACGGCAATCCAGAtacctgggatggaattaaagacatactttatagacattttcaagatcacagggatgaaaGAACTCTCTATAATCAATTAAGTTTGATAAGACAAACTAGTAGCTTGTCTAAGTTTTACGATGATATTTTAGATATCATCACAACGCTTAACGCACGAGTCAGACAAAACGAAGACAATTTAGAAATACGTAATAGAATGATACGAAGAAATATTAAAGAAGGTTTGGAAACCTTCGTAAAAGGCTTAAGGGATCCTTTTAGAACAATAGTTATGTCCAGAGATCCGGACACTTTAGAAGAAGCGTACGAAATTACACTCAGTTTAGCAGAAGCTAGTAGATCGTCTACAATAAATTTTAATAATAACCAACAACGGGTCAACAGAAATAATTATAACAATAACAATAATAATAACTATCAAAATAGAAACAACGACAATAATAACATGAACAGAAACAATAATTACAATAATAACACGAATAGAAATAATAATTTTAACAATAATAATTCAAATAGAAATAACAATTTCAACAATAATTTTAATAATAGAAACAATTTCGAAAATAATTCTTTTAGGTATAGGAATAATAATTCTGGACAACAGAGAACAGTTAACGGGGGCGAACCAATGGATGTTGATCCAAACCCATCTACTATTCAAAGGGGAAAATTTTCGGCCAGAAGCCTCGGATTAAGTACGTTACCGTATGTAGAAGTAAAAGTAAACGAAAATAAGAATTTAAAAATGTTAGTAGATACTGGATCTTCAAGTTCCATACTTAGTCCAGAAGGTATAAATAAGAGAAAAATTATAGATATAGAACCTAGAGTAGCAAAATCTTTTAGTGGTAACACAACAATTAATCAAAAAGTTGAAATGACTTTATTCGAAGAATTCGGGTTAGATTACCCAgtagtaacattttatttgcataaatttcatgattatttcgacgggataatcggaaacgatatacttagtgaacacaaaataattgtagattatgggaaaggagaaCTTAAAAGAGGACATTTTAAATTAAAAATGGAATTTAAACCAATAGTAAGGACATATGAATATGAGTTAGAACCAAGGCAGATTATTTGCGTTGAAATCCCCGTAGATAAAAAACGTGGTAACATACAAATATTAGAACGAAACTTAGGTAATGTTGAAGTCTTAGACGACGTATACTGTTCTAAGAAATGGTTGGCAAAGTTAACGTTGAAAAACAAAACAAACCACCCTCTAACTTTTAGAGTTCGACAACCTTTAAAAGCCAAACGGCTTTACGGTCCAGAGAAAGATATTTGCTTAGCAGCAGAAGAATCTCTAGATGTCAACTTAGCAGTTGACCAGTTTCCTAATATGCAACCAAATAAATATGATGAGGTAAAAGGAAAAGAAAGAGAAAATGAAACAAAAAAGATAGGCAAACAGCCAGATAAAACTAAGAAGAATATTAAAGGTAAAAAACCTAAGTTCAAAAGGACAGGCAAAAAGCCGCAAGTAAACTATGAAAATAACGAAAATAACGAAAAGACAGAAATACTTAATGAAAAAGTAAATAAGAATAAGGAAGAAATAAATTATTGCAGAATAGATGCACAATCAGAAAATATTAATGATCTaatgtcacaagtagaattaaatcacttagatagtgaggaagtagagcaactggaagatattctaacggaatatgcagatgtatttaagagagatgggcaaaaccttacttttacgaataaggtaaaacatgaaattaaaactacggacgaacgacctgtatatgtaaaaaattatagacatccctatgttcacaaggaggaaattcaaaaacaaataaaggaaatgttagaatcaggaataattagaccaagtagttcaccatggtcctcaccagtttggatagtgcctaagaaagatgattcatcaggaaataagaaatggcgattagtcatagatttcaggaaagttaatgaaaaaactatagacgataggtatccaataccaaacatacaagaaatattggaaatgttaggcaaatgttcccatttcaccacactcgatttagcatcgggattccaccagattgaggtagataagcgagatatcaagaaaacagccttcacggttaataatggtcattacgaatacacgagaatgccatttgggttaaaaaacgcgcccgcgacatttcaacgcgtaatggatgcaattttaaaggacttaataaatgtcatatgttttatttatatggatgatattataatattctcccaaaatctcattgagcatactcaaaatctacgaaaagtttttgaagcactaagaaatgctaatttaaaaattcaaatagaaaaaagcaaatttcttaaagaagaagtagagttccttggtcacgttgtgactagagatggtattaagccaaatccacggaaaatagaagcggttgaaaattacccaatcccaaaaacacagaaacagattaaacaatttttaggattactcggatattataggaagtttattaaggattttgcaaaagtaacaaaaccaatgacagaaaagttaaagaaaggtcaaaaaattgatataaataacgaaagatattcaaaatgctttagagactgtacaaacatgctaacatcagaaccaattctagcatacccagattttagtaaacaattcttgttaagcacagacgcatctaattatgcaataggagctgtgttatcccaaattcaagaaggattagaacaccctttatgttacgcaagtcgaacattgaacgatcacgagaaaaattattcaacaatagaaaaagaactattagccatagtttgggcgacaaaatacttcaggccatacctttacggtacaaaatttaaaattcaaacagaccataaacctttgaaatggcttatgaatttaaaagagccaaacagtaaattagtaaggtggaaattacaaatggaagaatttgattaccaagtagactataaaccagATACGAAAAATTCCGTTGGTCTTGTAGGATGTATTGAAGAAGTTTCACATAATGCTATTGCAGTTTATTGGAATCCATTGGAAAGTTCTGCAAAGGTGTGGTATGTTGTGGTTTGGTTTGGTTGCTGTTATACCGATGCTGCTTGCTGTTTGAGGATTTCCTCTTCATTGCGAAAGCGGTGGTGGCAGCCGGCAGTAGCAGTGGCAGCGCGATGCGTGATTATCATCATCATCCACATGGACACATCGTCGTCGTCGGTCGTCGTCATCATCACATCCCCACATGACAACGAAGACGATTGTCGAACAACCCGAAGAGAAAGACTTCATGTTGAAGCTCCTCCTTGTACCACCGCACTATCTCGCATAGCCCCCCCCCTCCTCCTAGCTGATGAGATCAATATTGCCGTTCAGTGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGGGTCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGAGATACACAAGTTTTCCATCGAGGCTATTGCCAAATAAAAGTCTTCTGCGATAAGGGTGCTGAGCGCAAAACACGAGATGAAGAAAGAAGAGCGGCCAAACGTAAAATGACCGCAACAGGAAGGAAAAAGCTCGATGAACTTTATCATCCTGTAACAGATCGTTCAGAATTTTATGCAATGCAAGACATAAGTAAACCACCTGTACTCTTTACCCCCGCCGATGACATGGAAAAGACATTCTATGGCCATGAGACTGATTCATTATCTGGTACACCAGATCTTAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTCGGTACCCCAACATTAAAATTCCACAATCATTTTCCGCCCGATGTGCAGACTGATAAAAAAGATCATATTCTTGAACAAAGTTTAGTTTCTGGTTCAATGTCTGAATTTGGTCCACCAATTAAACGTGGCCGTATGTCACCTCCGATAAGTGAACGTGTGATGCTTTATGTGCGACAAGAAAACGAAGATGTTTATACGCCATTACATGTTGTGCCACCATCAACAATCGGACTTTTAAATGCGATCGAAAATAAATACAAAATCTCCACATCAAGTATAAATAATATTTATCGTACAAATAAAAAGGGGATTACTGCGAAAATTGATGATGATATGTTATCATATTATTGCAATGAAGATATATTCCTGCTGGAAGTGCAACAAGTTGAAGATGACCTATATGATATAACCCTGACCGAGCTTCCAAATCATTGA
Protein Sequence
APTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNNNNNSSNGNGAGGHSQKVLVVQSPTPSIQIKDPPPSPGSPTNETMYAAGGSTQIYLQGPHQTGSSVTGGSNVNTHSPSPGPYISPDSYGMYTTRLATGPNSTFISEPYYREYFAADGQGGYAPATRTVYGDSEGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVTSMQRAVSIHGGQNSPTTSLSGGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADLLKTLPEFTGKPTELEEFVRSANLVWNALSTIENAPLQLWLQVLRNKIKGKASDRLRLYGNPDTWDGIKDILYRHFQDHRDERTLYNQLSLIRQTSSLSKFYDDILDIITTLNARVRQNEDNLEIRNRMIRRNIKEGLETFVKGLRDPFRTIVMSRDPDTLEEAYEITLSLAEASRSSTINFNNNQQRVNRNNYNNNNNNNYQNRNNDNNNMNRNNNYNNNTNRNNNFNNNNSNRNNNFNNNFNNRNNFENNSFRYRNNNSGQQRTVNGGEPMDVDPNPSTIQRGKFSARSLGLSTLPYVEVKVNENKNLKMLVDTGSSSSILSPEGINKRKIIDIEPRVAKSFSGNTTINQKVEMTLFEEFGLDYPVVTFYLHKFHDYFDGIIGNDILSEHKIIVDYGKGELKRGHFKLKMEFKPIVRTYEYELEPRQIICVEIPVDKKRGNIQILERNLGNVEVLDDVYCSKKWLAKLTLKNKTNHPLTFRVRQPLKAKRLYGPEKDICLAAEESLDVNLAVDQFPNMQPNKYDEVKGKERENETKKIGKQPDKTKKNIKGKKPKFKRTGKKPQVNYENNENNEKTEILNEKVNKNKEEINYCRIDAQSENINDLMSQVELNHLDSEEVEQLEDILTEYADVFKRDGQNLTFTNKVKHEIKTTDERPVYVKNYRHPYVHKEEIQKQIKEMLESGIIRPSSSPWSSPVWIVPKKDDSSGNKKWRLVIDFRKVNEKTIDDRYPIPNIQEILEMLGKCSHFTTLDLASGFHQIEVDKRDIKKTAFTVNNGHYEYTRMPFGLKNAPATFQRVMDAILKDLINVICFIYMDDIIIFSQNLIEHTQNLRKVFEALRNANLKIQIEKSKFLKEEVEFLGHVVTRDGIKPNPRKIEAVENYPIPKTQKQIKQFLGLLGYYRKFIKDFAKVTKPMTEKLKKGQKIDINNERYSKCFRDCTNMLTSEPILAYPDFSKQFLLSTDASNYAIGAVLSQIQEGLEHPLCYASRTLNDHEKNYSTIEKELLAIVWATKYFRPYLYGTKFKIQTDHKPLKWLMNLKEPNSKLVRWKLQMEEFDYQVDYKPDTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKVWYVVVWFGCCYTDAACCLRISSSLRKRWWQPAVAVAARCVIIIIIHMDTSSSSVVVIITSPHDNEDDCRTTRRERLHVEAPPCTTALSRIAPPLLLADEINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFTPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPSTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-