Basic Information

Insect: Eupelmus urozonus
Gene Symbol: -
Assembly: GCA_900480035.1
Location: UELX01004036.1:9499-17443[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.15 16 6.7 0.2 1 21 279 299 279 300 0.95

2 16 2.8 3.1e+02 2.7 3.9 1 23 314 337 314 337 0.95

3 16 2 2.2e+02 3.1 0.2 2 13 343 354 342 356 0.88

4 16 0.11 12 7.1 4.4 2 23 374 396 373 396 0.92

5 16 0.0031 0.35 11.9 4.0 1 23 592 615 592 615 0.96

6 16 0.059 6.7 7.9 0.4 1 21 673 693 673 694 0.94

7 16 0.41 46 5.3 1.9 3 23 703 724 701 724 0.91

8 16 0.00081 0.092 13.8 0.4 1 23 783 808 783 808 0.98

9 16 0.31 35 5.7 0.1 2 20 814 832 814 833 0.93

10 16 0.0075 0.85 10.7 0.1 1 23 840 863 840 863 0.97

11 16 0.00022 0.025 15.5 0.1 2 19 873 890 872 892 0.94

12 16 0.03 3.4 8.8 3.5 1 21 900 920 900 923 0.95

13 16 6.8e-05 0.0077 17.2 1.7 2 23 1062 1084 1051 1084 0.97

14 16 0.55 61 4.9 0.5 1 20 1090 1109 1090 1111 0.90

15 16 0.026 2.9 9.1 0.0 3 21 1127 1145 1126 1146 0.93

16 16 8.1e-06 0.00091 20.1 0.6 3 23 1156 1177 1154 1177 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.15	16	6.7	0.2	1	21	279	299	279	300	0.95
2	16	2.8	3.1e+02	2.7	3.9	1	23	314	337	314	337	0.95
3	16	2	2.2e+02	3.1	0.2	2	13	343	354	342	356	0.88
4	16	0.11	12	7.1	4.4	2	23	374	396	373	396	0.92
5	16	0.0031	0.35	11.9	4.0	1	23	592	615	592	615	0.96
6	16	0.059	6.7	7.9	0.4	1	21	673	693	673	694	0.94
7	16	0.41	46	5.3	1.9	3	23	703	724	701	724	0.91
8	16	0.00081	0.092	13.8	0.4	1	23	783	808	783	808	0.98
9	16	0.31	35	5.7	0.1	2	20	814	832	814	833	0.93
10	16	0.0075	0.85	10.7	0.1	1	23	840	863	840	863	0.97
11	16	0.00022	0.025	15.5	0.1	2	19	873	890	872	892	0.94
12	16	0.03	3.4	8.8	3.5	1	21	900	920	900	923	0.95
13	16	6.8e-05	0.0077	17.2	1.7	2	23	1062	1084	1051	1084	0.97
14	16	0.55	61	4.9	0.5	1	20	1090	1109	1090	1111	0.90
15	16	0.026	2.9	9.1	0.0	3	21	1127	1145	1126	1146	0.93
16	16	8.1e-06	0.00091	20.1	0.6	3	23	1156	1177	1154	1177	0.96

Sequence Information

Coding Sequence: ATGAATCAAAAAATTCCTACTCGGGTCGCTGAGTTCCCAAACTATAGAGAAACATATCCAATTGcaAATAACAAGGAAATTATTGAACCACCTCCTTATACAAGAGAAGAAATAGTATTATCTGACTCATCTGATGTTGAAATAGTACaagaaataactaataaaaattttatttttgataaaaatttacgcTTGAAAAAGGTGCCAAAACCAAAGATAATTTATGCTTCTAaaatttttcCAATGAATCATGTTCAAAAATCTACTTCAGAAGAGCTTATTATTCCAGATCGTCTAGATTCTGTTGattttggAACAACagtaaacaataataacaatgttcaaaaacattcaaaaaataaaacaaagttgaTCATTAGACAACAAACCCTGAATGAACAAACTAAAATTGGTCAAGTATCGAATAATATtgcaaatcaaataataaaagctattaaaaatcaaaatttaatcatgAATAAAGGTACCATCGTAGTTAATAATTCtggtataaaaaacaatttattacaaagaaaaagtaattctaAGGTGGAACTTATTAcaatgtttaataaaactttaaatcctTTCAAAGAAGtgccaaataaaaaattaaaaatttcaattattaaaaatggaaaaattattaaatgtaatataccaTCTTTAAAAGCCCATGAAGTGCCTATCACTACAAACAGTATTGACACcgtaataatggaaaaaaataataaaaCATCAAATGCAATTATTTCATACTGTGGAGTATGCGATAAAACGTGTGAAATGCATTTATCAATTACCAGATGCCAAATTTGTAGAACTAAGTTGCAGTACCAGTGTCGAAAGTGTAGCAGGAGATACTTAACGTGGTCAAAAATCATTGCTCATATCAATATTCCTTGTCCACCACAAAATTCAATTCCTAAAGCAAAAGTTTACAAATGCAAATATTGTAGTTTTACCTCAGTGTGCCATGCTAATGTAAAAGAACATATTATAACTGAAcatacaaaacaaaaagtttattgtcAAAGAtgtgaaaaaagttttgtagaCAATATTACAGGCAGAGAGTTTGCTAAGGTGCACATGATGAACTGCACAGtaggttttttaaaatgtaaattttgccCTCACAAACTAGAACATAAATGGGATCTGAAAAAGCATATTGAATTCTTCCACAAAAATGAATTCAAACCTCAGGACTTAGAAGACATTATTGCagATGAtacaaatgaattaattattcccgaagtttataatgaatctgaTATTGACGAAAGCTTAGATTATGTAATATCTaacaatgatgaaaaaaataaagtacaaagaaGAAAACAAACTCTTAAACGGAGAAAGGTTCAGCCGGCATTTGaaatggTTTCGATTAAAGAGGAACCACTTGTTGTAAAAGAAGAATTTGATGTTATAAATGTGCCAGATTCtgATGATGATGTCAccataaaaagtgaaaatttaaaccAAATCGAGCTGTCtgatgttaaaataaaagatgaacCAAACCCtgATAAGTCTTGTAATGATGTTAATGGGCAGCTAAATCTAACAACTTATCAATCTagtaattcaaatttcaatgaagttacaacaaaaaatattcctgaattaaataatataaccaAGAAAGAAATAGaaATTATAAATGTGTTTGCTGTACTCTGTTGTATGAATTGCTCATCTGTTGAAAGATTAATTGACAAGCAAAAGGATAATTTTAAGTGCACAGCATGCTGCAGCAACATGAATCACCAGTGTAATCTGTGCAAAAAAGTTTTCTCTACTTTATCTTTTATGTACTTGCATCTTTTAAAGAAACACGTTCAATTTTCTCGAAATATTGCTGTacataaaaggaaaaataaaaatattccaagagAAGATGTCAcaccaaatattataattaatataacaaacaataatcgtaataaaattaatcccaTCAGTACTAATGGTGATGTCAATCCTGTTAGGCAATATGATCCAGAAGGTTACAagtgtaaaaaatgtaacatatgGTATTCGCGTGAAGTATACTTAATTAAACATGAGCAGTCATGTCAAATGGTTTCTAACATATGTTGTAAATTTTGCCCTTCAAGACTGAATTTTAAGTCACAACTCAGAATTCACTTGTTAGATGATCATAAGCAAGACTTCCAAATTGAGGATCTTGAAGATATTCTTGACAGTATTATAAGcagttcaaaaaaattaagagGTATGCTGAATTTGATTCTGGGCTGCTGCATCACTTGTAAGATTAAGACACCGGTTGGCTCTCAACAGAGTCATTGTCACATTTGCGCGACAGAACTGATCTACCAGTGCGGCGTGGTCAAGTGCTCTGCGAGTTACTCTTCGGTCGAACATCTAATTCAACACCTGAGGACTGATCACTCAACCTTGAGCGGCGTTTGCGAAAAGTGCGACAACGTGTACAATTCACGCGAGGAGCTGGATCTTCATCGAGTCGACTGTCCTAACGGCGCATACACCTGCGCAATCTGTCCTTTCAGAAGTGTCTCAACAGATGAGCTTGAACAGCACGCGCGCAGCGTTCACGTAGTCATGAACTGCGGACGAGCCTGGCAATGTAATCGATGCGGCAAGATTTTCTATCGTAAAGAACAATTGGAGATTCACGAGAGCTGCGACTGTTTCGATCCTATCTTCAATTGCGACCATTGTAACTTTACGGCTACCGATAAGAGCACCCTGGTGGTTCATCTGCGCTGCACTCATGTTACACTCTTCACCGGCAAACTTCCGCAGTGTCACAAGTGCGGCAACAAGTGGTCCAGTGTTTTTAAGCTTTACAACCATGTGGGTTTGTGCTCGGGTGATCACGAACTGGAGAAAGCTAAGATGATGAAGAAAAACAATTTGGAGCTTAATGAAAATGAGACGGCTAAAACTCAAGAACTGAATGCAGACTATGAGAAATCAGATTTGCCTTTAGACTTGCCTTTATCAGgtGATAATGATCCCTGCAATAACGTCGAAAATATcgtttctgataaaaatttttctgaagaaACGAATGAGGAACGCGCGCAGAAATTGATGAACATCTTCTGCGTAAACTGCAACGATAGCCCGGACGGTGTGGCGAGCAAAGGAGGCGTCTGTCCCGAATGCGAGGTGCCTTACATCAACCGCTGCTGGGAGTGCGGTAAGGAGTTCAACCGCTGGTACATGCTGCTGGTGCACGTCAATCGTAAACACGGCCCCGACAAGCTGCACAAGTGCTGGGGCTGTGCAAAGAGCTTTTTTTTGCGTAACGATGCTAAGAAGCACGAGCTGGTTTGTACGAAATTGGCTGCATACGTGAAGGCAGGCGTGCCGAGGTCGTGTGGAAGCTGTGGCAAAAGTTACGGTCGTGCGGCGATGATGGAGGCTCACATTAAATATTGCGGTAAGGGAGAGTGTAGATTACTGTGCGACCAGTGCGGCTGGACGTTTAAGAGCAAGCGCAAGCTGGCGCGTCACATAAGGGAGCAGCATGCAGATATGAGCTACGATGGACAGCAGGAGGGCAGTGCTGGGTCCAAGTGTTCGGGGAGATCGGGAGAAGTGCGACGCAGTAGTGTAGTTTga
Protein Sequence: MNQKIPTRVAEFPNYRETYPIANNKEIIEPPPYTREEIVLSDSSDVEIVQEITNKNFIFDKNLRLKKVPKPKIIYASKIFPMNHVQKSTSEELIIPDRLDSVDFGTTVNNNNNVQKHSKNKTKLIIRQQTLNEQTKIGQVSNNIANQIIKAIKNQNLIMNKGTIVVNNSGIKNNLLQRKSNSKVELITMFNKTLNPFKEVPNKKLKISIIKNGKIIKCNIPSLKAHEVPITTNSIDTVIMEKNNKTSNAIISYCGVCDKTCEMHLSITRCQICRTKLQYQCRKCSRRYLTWSKIIAHINIPCPPQNSIPKAKVYKCKYCSFTSVCHANVKEHIITEHTKQKVYCQRCEKSFVDNITGREFAKVHMMNCTVGFLKCKFCPHKLEHKWDLKKHIEFFHKNEFKPQDLEDIIADDTNELIIPEVYNESDIDESLDYVISNNDEKNKVQRRKQTLKRRKVQPAFEMVSIKEEPLVVKEEFDVINVPDSDDDVTIKSENLNQIELSDVKIKDEPNPDKSCNDVNGQLNLTTYQSSNSNFNEVTTKNIPELNNITKKEIEIINVFAVLCCMNCSSVERLIDKQKDNFKCTACCSNMNHQCNLCKKVFSTLSFMYLHLLKKHVQFSRNIAVHKRKNKNIPREDVTPNIIINITNNNRNKINPISTNGDVNPVRQYDPEGYKCKKCNIWYSREVYLIKHEQSCQMVSNICCKFCPSRLNFKSQLRIHLLDDHKQDFQIEDLEDILDSIISSSKKLRGMLNLILGCCITCKIKTPVGSQQSHCHICATELIYQCGVVKCSASYSSVEHLIQHLRTDHSTLSGVCEKCDNVYNSREELDLHRVDCPNGAYTCAICPFRSVSTDELEQHARSVHVVMNCGRAWQCNRCGKIFYRKEQLEIHESCDCFDPIFNCDHCNFTATDKSTLVVHLRCTHVTLFTGKLPQCHKCGNKWSSVFKLYNHVGLCSGDHELEKAKMMKKNNLELNENETAKTQELNADYEKSDLPLDLPLSGDNDPCNNVENIVSDKNFSEETNEERAQKLMNIFCVNCNDSPDGVASKGGVCPECEVPYINRCWECGKEFNRWYMLLVHVNRKHGPDKLHKCWGCAKSFFLRNDAKKHELVCTKLAAYVKAGVPRSCGSCGKSYGRAAMMEAHIKYCGKGECRLLCDQCGWTFKSKRKLARHIREQHADMSYDGQQEGSAGSKCSGRSGEVRRSSVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00690590;
90% Identity: -
80% Identity: -