Euro003339.1
Basic Information
- Insect
- Eupelmus urozonus
- Gene Symbol
- -
- Assembly
- GCA_900480035.1
- Location
- UELX01001338.1:16305-21579[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0011 0.12 13.4 2.1 1 23 391 413 391 413 0.97 2 13 0.073 8.2 7.6 1.5 2 23 458 479 458 479 0.95 3 13 0.0016 0.18 12.8 1.1 2 23 542 563 541 563 0.96 4 13 8.4e-06 0.00094 20.0 3.1 2 23 606 627 605 627 0.97 5 13 1.5e-05 0.0017 19.2 3.9 1 23 632 654 632 654 0.96 6 13 0.0005 0.056 14.5 0.8 1 21 661 681 661 685 0.92 7 13 0.0023 0.25 12.4 5.2 1 23 776 798 776 798 0.97 8 13 5.5e-06 0.00062 20.6 2.2 1 23 845 867 845 867 0.98 9 13 0.00071 0.08 14.0 0.7 1 20 872 891 872 893 0.94 10 13 0.05 5.7 8.2 0.3 2 23 904 925 904 925 0.97 11 13 1.2e-05 0.0014 19.5 0.7 2 23 963 984 962 984 0.97 12 13 2.4e-05 0.0027 18.6 1.5 1 23 989 1011 989 1011 0.95 13 13 4.5e-05 0.0051 17.7 1.9 1 23 1017 1039 1017 1039 0.98
Sequence Information
- Coding Sequence
- ATGGACGCCGTCGAGGTAAACACTACGTCCCCGGGCCTGACAGcccagcagcaccagcagcagctgGACGACGTCTGCCGGATCTGCCTGCTGGGCAGCCCGGCGATGCGCGGACTCTTCCACGGCGAGACCGTCCTGGCCGAGAAGGCCATGAGCCTCGCCAGCGTTAAGatgcttCCTGGAGATGGACTACCTTCTCATATTTGCACCGATTGTTGTGATAAGCTTGAATCagcatacaaatttaaattacaaatagaaCAAGCAGATATTGCTTTAAGGGAAAGACTGGACTCCTTAAAAGACATAAAAGAGGAACTATTTTTTAGCGATGTAGATGTAAACCTGACAAGTCACAGACATGACGTTGAAGAAATAACAGAGGAAAGTTTGCTTTTAAAGGATCAGATAGATCTTTTAAATGATCAGAAAATTCatgatgaaattttagaaagtagTGATGTACAGACACAAATCAACGATATCAGTTCTGAGCAAGAGGAAATACAAAAgcaagaggaagaagaaaatcAAGAAGAATGTGAAAAAGAAGAGCAGATTGAGTTTCTGGAAAATGAACAGGAATGTGAAAAAGAAGAACAGATTCAATTTCTAGAAAATCAAGAAGTTCAAATAGTTAACAGTGAACCACAAATAGAAAATCAAGAGGATCATCAAATACATGAGATTAATGACGAATCTCAGACTACAATTGAAGATGGCCAAGGTTTCTCACAGGTATCAAATGAGCACAATGAATCATTTGGATCACAAGAGCTTCAAGAAATGATGTTTTCTGAAATTGATAGTCAGGAAAGAATGGAAGAggatttaaatcaaaatcaacaaTTACCAATGCATGAGCATGATTATACAGCAGAGCCCCAACCATGTAAAGTTTCtaatggtaataataatactacAAGTAAATTAGACTTAGAAACAGATAAAATAGGGgatgataaagaaaatatagaaaaacaaCAACAGATTGAAATGTATGAAGTGCAAGATTCATCACCAAGTGATTCCATTCGGAGAAGTAAGCgtaaaattaatcaacaaaagAATCTTACCACTCGAGATTCagatgaagaaaattattttgagaatttaaatcTTAGTTCTAGATTAAAAAAAGTACAGTCAGAAAAGTcagatagaatttattttatgtgttaTCTGTGTGATAGACAATTCGTATCTAAAGAGGTATTAAAAGAGCACATGCATTCTCATGAAGAAGTTAGAAAAACTCTATCTCTTGTGAAAACGTTTCcagaaaaagtacaaaaaactcCAGAGAAAGCTCAAAGTTTCACTTCAAGTCCAACCTCATCAAAGCCACCATCTAGTGGAAAACATCCAAATACTTGTCCCCATTGTGGAAAGGaatatctttatataatttcatttaacaaGCATTTAAAGCAACatgaaaaggaaaagaataATATGAAAGAAGATCCCATGCCACTGGAAGTTTCTTTCcatgaagatgatgatgaacTAGATTTCCAAGGCTATGATAATTCCACTGCTGAAATGGACTATGATAATGAAGAAGATGAGATTGAAacagataaaaaagtttatgtgaaaaAGGAATTAGAAAGTTTGTTACAGTGTAATATCTGTTCAGAAGAGTTTGATACAAtggataaactaaaaaatcataagtCTAAGCATATTGTTGAAGGTTCACTAATTGAGcaagatttaaataatgatgaacTACTAAATAATTCAGATAGTGATGAAGAAGCTAACATAAAGGactttaatactattaaaaaagaagagttcAAAGATCTCAAATGCCCACACTGTCCAATGTCATATTCCCACAAAAAGTCTCTTGCACGTCATATGGAAAGCCACTCTGGCACAAAGTACAGTTGCAAACTCTGTTCACAAAGTTTCTCTAGGAAAGATCACTTACGTCGGCATGTAGATCAGCATACGAGCcgattaaaaagctttaaatgtACACAGTGTAATAAAAGCTTTGGCAATGAACTGACTTTGAGAAACCATTTGATAGCAACAAATCACAAAACTACTGTGAGAGGGCAGGAATATGATCCAAATAAAAGGATCAAGAGGGTAGCTGCTAAGGCTGCACAAAGAATTATTGACCAAATCAAAACTGATCTTATGGAtgaagaggaagaagagaaaGTGCCAAGATTAAGGgacagagatagagatagagataaaataaaagataacgaGGACATCAAAGAAGAAATGAATGATTCAATAGAGAAACAAAAGGAAAATACGGCACAGGTACCTAAGAAATTGCAACGTAGTTCCAAATCTTTTATTTGTGAAACCTGTCATACAAAATGTTCTTCGAAACAAGCTCTCACTAAACACATGGAGCAACACGTGAAGGatgaaaatacaattaatcaagaaaaagttattaaaacgcTCGAGGAAAGTCGAGAGACGGAGGAGAATGAGGAAGACAACGACGACGATGACGATTATTTCGAAGGCGGTCTCGACTGGCCAATTGATAGTTATGAATGCCCCACTTGTAAAAAACGTTATAGTACCAAAAAATCCCTGTTGCGCCATCAATTGTTACACGAGGAACCTAATTTTGAATGCGATATTTGCAGCgtgaaattttatagaaaagatAAACTTAAAGCTCATTATGATAAATGTTCAGAAAAGAATCCAGACCAAGTACGAAAGTGTAATATTTGTGGTGATACGTTTGAGAACAATGAAATTTTGAGAGAGCATCGGGCGAAACACGTTACGGAAGGAATTTTGACAGAAGAGGATCTAAGAGAAATAGAGCCAAGACCCGAGGATAAGAATGAGGAGAAGCAACCGCGGAAAAGACGTACGGATATCGTAGGTCTTGAATGTACTGAGTGCAACAAACGATATACCTCTAGAAAAGGATTATTAAGACATATACAGGTACACGAAGGGAAAAAGTACTTGTGTGAAATATGTCCAAAGAAGTTTTACAGGCGAGAACATCTAAAGATTCATGTAGCCAAACACAACATGATCAAGCCTTACAAATGCCCTCGTTGTACAAAGCGTTTTATCAAGGAGGAGCAGTTGAACAATCACCTAACGAAACATGAAAGAACATTCAAGAAGGCTAAAGAGTCCTCTGATACGGCAAAGAGATTCCTGTATGCTCATAGCAAGCGCTGCAAACAGAATTTGCAAGGTAGGCCTCAGCAGAATTTGCAAGTCAGACCTCAGCAGCAGCTTCCATCTGTTCACAACTTTGGCCCGATCGATGCACAAGAGTTGCAAGAGCAGCAAGAACAAGAAGAGCAGGAGCAGCAGTTACAGCTGCAGGAGCACCAAGAGATCCAGCAGCAATTGCAACAACAGCAGAGGATACACCAGGCCACCATTGGTCAGGCACAAATTATCAAACCACAAAACATCAAGACCATCACCATTACCAGGCAAGATCCGAGTCTTGGGCAGCAGCACGTCATGGCCCATCAGGAGATTTTGATGCCTCTGATATTGCCATTAACGGTGACTTTGACCGATGTGGGTGAGGAGGTGATTCTTCCTGAGGGCACCAAGATTTTCACCACGTAA
- Protein Sequence
- MDAVEVNTTSPGLTAQQHQQQLDDVCRICLLGSPAMRGLFHGETVLAEKAMSLASVKMLPGDGLPSHICTDCCDKLESAYKFKLQIEQADIALRERLDSLKDIKEELFFSDVDVNLTSHRHDVEEITEESLLLKDQIDLLNDQKIHDEILESSDVQTQINDISSEQEEIQKQEEEENQEECEKEEQIEFLENEQECEKEEQIQFLENQEVQIVNSEPQIENQEDHQIHEINDESQTTIEDGQGFSQVSNEHNESFGSQELQEMMFSEIDSQERMEEDLNQNQQLPMHEHDYTAEPQPCKVSNGNNNTTSKLDLETDKIGDDKENIEKQQQIEMYEVQDSSPSDSIRRSKRKINQQKNLTTRDSDEENYFENLNLSSRLKKVQSEKSDRIYFMCYLCDRQFVSKEVLKEHMHSHEEVRKTLSLVKTFPEKVQKTPEKAQSFTSSPTSSKPPSSGKHPNTCPHCGKEYLYIISFNKHLKQHEKEKNNMKEDPMPLEVSFHEDDDELDFQGYDNSTAEMDYDNEEDEIETDKKVYVKKELESLLQCNICSEEFDTMDKLKNHKSKHIVEGSLIEQDLNNDELLNNSDSDEEANIKDFNTIKKEEFKDLKCPHCPMSYSHKKSLARHMESHSGTKYSCKLCSQSFSRKDHLRRHVDQHTSRLKSFKCTQCNKSFGNELTLRNHLIATNHKTTVRGQEYDPNKRIKRVAAKAAQRIIDQIKTDLMDEEEEEKVPRLRDRDRDRDKIKDNEDIKEEMNDSIEKQKENTAQVPKKLQRSSKSFICETCHTKCSSKQALTKHMEQHVKDENTINQEKVIKTLEESRETEENEEDNDDDDDYFEGGLDWPIDSYECPTCKKRYSTKKSLLRHQLLHEEPNFECDICSVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNEILREHRAKHVTEGILTEEDLREIEPRPEDKNEEKQPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCEICPKKFYRREHLKIHVAKHNMIKPYKCPRCTKRFIKEEQLNNHLTKHERTFKKAKESSDTAKRFLYAHSKRCKQNLQGRPQQNLQVRPQQQLPSVHNFGPIDAQELQEQQEQEEQEQQLQLQEHQEIQQQLQQQQRIHQATIGQAQIIKPQNIKTITITRQDPSLGQQHVMAHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00690509;
- 90% Identity
- -
- 80% Identity
- -