Basic Information

Insect: Eupelmus urozonus
Gene Symbol: -
Assembly: GCA_900480035.1
Location: UELX01003117.1:14600-18075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.14 16 6.7 0.0 1 23 333 355 333 355 0.94

2 12 0.29 33 5.7 0.4 2 19 358 375 357 377 0.88

3 12 8.2e-07 9.3e-05 23.2 1.1 3 23 419 439 418 439 0.98

4 12 0.00011 0.013 16.5 0.3 1 23 445 467 445 467 0.98

5 12 0.00058 0.066 14.2 2.6 1 23 473 495 473 495 0.98

6 12 0.00021 0.024 15.6 2.5 1 23 501 523 501 523 0.98

7 12 0.00012 0.014 16.4 1.8 1 23 529 551 529 551 0.99

8 12 5.3e-07 6e-05 23.8 0.5 1 23 559 581 559 581 0.98

9 12 0.0049 0.55 11.3 0.2 1 23 587 609 587 609 0.94

10 12 1e-05 0.0012 19.7 2.9 1 23 615 637 615 637 0.98

11 12 6.3e-05 0.0071 17.3 0.2 1 23 643 665 643 665 0.97

12 12 0.00089 0.1 13.7 2.5 1 23 671 693 671 693 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.14	16	6.7	0.0	1	23	333	355	333	355	0.94
2	12	0.29	33	5.7	0.4	2	19	358	375	357	377	0.88
3	12	8.2e-07	9.3e-05	23.2	1.1	3	23	419	439	418	439	0.98
4	12	0.00011	0.013	16.5	0.3	1	23	445	467	445	467	0.98
5	12	0.00058	0.066	14.2	2.6	1	23	473	495	473	495	0.98
6	12	0.00021	0.024	15.6	2.5	1	23	501	523	501	523	0.98
7	12	0.00012	0.014	16.4	1.8	1	23	529	551	529	551	0.99
8	12	5.3e-07	6e-05	23.8	0.5	1	23	559	581	559	581	0.98
9	12	0.0049	0.55	11.3	0.2	1	23	587	609	587	609	0.94
10	12	1e-05	0.0012	19.7	2.9	1	23	615	637	615	637	0.98
11	12	6.3e-05	0.0071	17.3	0.2	1	23	643	665	643	665	0.97
12	12	0.00089	0.1	13.7	2.5	1	23	671	693	671	693	0.96

Sequence Information

Coding Sequence: atggcAGCCGTTGAAGAACTTAATTATTTGTGCCGATTATGTGCCACAAAAATGGGCATTCTTATGGGTCTGCCCATCTTTGAAGACGGGGAACAAATGAGAAATATAGACAAGAAAATTAGTGCTTGTCTACCTGTAcagattTCAATGACGGACCAGCTACCAAAAGTGATATGTGGAGAATGTGCTTACAAAGTTGATGAACTCTTTAATTTTCGTGAGAAAGTTTTACAAACTGAAGGCATGTTTATGCAAATGCTTAAAGCCATTAGCAAACAGCAAACCAATTCTTTAAATAGCGTTACTATTAATGAAATTCAAGAAAACATAGATAGACTTACCAATGGCAttgatgaaattcaaaatactaaTGTGCCCACGCATGAAGTTCAAAACAGCATTTCTGCTATTCcagtaatgaataatataaatctttctGATAGAGAACAAGTTGTAACACAAGAAGAAATGCATCGAGAAGAAGCTGGCATAGGAGTTACTGATTTTCATTTAGATGGAGATACAGTAAGAATGGTGGATGAAATGAGAGAGgTCTCCAATCAAGAGATGACATTACCAATGCATCTAGAAGGCGAAATGTCGGTAACAGTGGAGAACTTGACAGTGGGTGGTCACCTCAGTCAGCTAGACATCAACTACGACGCCTCGATGACATCTGATTCATTGCAGGATCAAAAACATATTGTCTATTGTGACGACGAAGTCAAGTTTGAAACAGTTACGACTAAGGACTTGCACGAAAGGCTGCAGAGTGACAGCGCTGGTACGCAACAATCTCGCAGCACCTTCGCCAAGGAGAATGATATCACCGACGCTCACCTCGTGGATGGCTCTCCGCATTCTTTTGCTTTGCCGTCCACGAGTCAAGTCGAAGAGCCCGATGGAATCTTAGTGCAGTACACAAAGAGTGCGAAAAATGCGCTACTTGAAAATGCGTTGAGTAACCCTACTATTGATGAGACTGAAACAAGTTGGTATATCTGTCCATTTTGCAACGAAGCTGCTGCGGAGCCAAATAATCTCATTTTACATTTTGAGCAACATTTTTGTAGCTGTCCTAATTGCGATATGTATTTCACCAGCATTGAAGTACTAAACCTACATAGTCAAGACTGTCTGGAGGGAGAGAATAAAGACGAACTAAAAAATTACGACGATTCGTCGCAAGATCCTCTGAAACAACGAGAATCGGATAAAAAATCAGGAGTTAGGCAAAAGTGGACGCCAAAAATCTGTCCTAACTGTGGCAAACAATATAGAACAAATTATAAACTTCAGgaGCATATGCGCAAACACACCGGAGAAAAGCCGTTTCAATGCATGCTCTGTGAAAAAGCATTCCGCAGCAAGATTGGTCTAGCCCAGCACACGGCCACTCACACCGGCCAGTTTGACTTTAACTGCTCAACTTGCGGCAAAGGCTTCCAATGTAAGAGCTACTTGATCGTTCATCAGCGTGTCCATTCCGATCTAAAACCTTACTCGTGCACGACCTGCAATCAAAACTTTAAGACAAAACAGTCGCTATTGGACCACGAAAATCGCCATATGGGTGTCAAGCCTTACAAGTGCGAAATCTGCGGCCGAGGCTTTATAACTAAAGGTCTTTGCAAAAGCCATCAGAAAATACACTCAGGCTTAGATAACCGACAGTATCCCTGTGTTGTATGCAATAAAATGTTCGTGAGCAAGAGCTACCTAAACACTCACCTCAGAATTCATACTGGAGAGAAGCCGTATTTATGTGaggtTTGTGGAAAAGGTTTTCTGACGCGAGTAGACCTCAAGATTCATTCAACGATGCATACGGGCGAAAAGAGCTTTAAGTGCGATTTATGTGGCAAAGTATTCGCGAGACGATCTGCTCTACGTTGTCACAGACGCTCGCATACCGGTGAACGGCCCTACGCCTGCGAAGTCTGCGGTAAGACGTTTACGCAATTCAGCCCAATGGCGATACACAAACGACTGCATACGGGCGAGCGACCATACGAATGCGATGTATGTGGCAAGGCCTTTGTCTCGAGATCGACAATGATGTGTCATAAGAAAAAGCACAATACAAATGACGCCAAAGCTGCCGAGCAGAATAAGTCAAAAGAGGGAGATGCCCTTCAACAGAAAGAGGCATCCCTCAAGGATACTCAGAACCCGGGTGTATCCGTAGCCGCGGAGTAA
Protein Sequence: MAAVEELNYLCRLCATKMGILMGLPIFEDGEQMRNIDKKISACLPVQISMTDQLPKVICGECAYKVDELFNFREKVLQTEGMFMQMLKAISKQQTNSLNSVTINEIQENIDRLTNGIDEIQNTNVPTHEVQNSISAIPVMNNINLSDREQVVTQEEMHREEAGIGVTDFHLDGDTVRMVDEMREVSNQEMTLPMHLEGEMSVTVENLTVGGHLSQLDINYDASMTSDSLQDQKHIVYCDDEVKFETVTTKDLHERLQSDSAGTQQSRSTFAKENDITDAHLVDGSPHSFALPSTSQVEEPDGILVQYTKSAKNALLENALSNPTIDETETSWYICPFCNEAAAEPNNLILHFEQHFCSCPNCDMYFTSIEVLNLHSQDCLEGENKDELKNYDDSSQDPLKQRESDKKSGVRQKWTPKICPNCGKQYRTNYKLQEHMRKHTGEKPFQCMLCEKAFRSKIGLAQHTATHTGQFDFNCSTCGKGFQCKSYLIVHQRVHSDLKPYSCTTCNQNFKTKQSLLDHENRHMGVKPYKCEICGRGFITKGLCKSHQKIHSGLDNRQYPCVVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLKIHSTMHTGEKSFKCDLCGKVFARRSALRCHRRSHTGERPYACEVCGKTFTQFSPMAIHKRLHTGERPYECDVCGKAFVSRSTMMCHKKKHNTNDAKAAEQNKSKEGDALQQKEASLKDTQNPGVSVAAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00692326;
90% Identity: iTF_00692326;
80% Identity: -